Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L13
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 237 4e-62
BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 237 4e-62
BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 237 4e-62
AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein ... 237 4e-62
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 36 0.25
AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein. 35 0.43
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 34 0.75
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 34 0.75
AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein. 33 0.99
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.3
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 32 2.3
BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open readi... 32 2.3
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 32 2.3
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 32 2.3
AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element b... 32 2.3
AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element b... 32 2.3
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 32 2.3
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.0
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 31 4.0
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 31 5.3
AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens ... 31 5.3
AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fus... 31 5.3
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 31 5.3
U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein. 31 7.0
X06290-1|CAA29618.1| 4548|Homo sapiens protein ( Human mRNA for ... 30 9.2
DQ452068-1|ABF47086.1| 2040|Homo sapiens lipoprotein, Lp(a) prot... 30 9.2
AL596089-1|CAH73590.1| 2040|Homo sapiens lipoprotein, Lp(a) prot... 30 9.2
AL109933-1|CAI22905.1| 2040|Homo sapiens lipoprotein, Lp(a) prot... 30 9.2
AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens ... 30 9.2
>BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 237 bits (580), Expect = 4e-62
Identities = 123/227 (54%), Positives = 150/227 (66%), Gaps = 7/227 (3%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXXXTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TALTQERKRRXRTLPXGLLAPXQIRXFLTLASHPGLHSXSVPGILSL 773
T LT ERK+R +T+P L+ P ++ + +ASH GLHS S+PGIL+L
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILAL 227
>BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 237 bits (580), Expect = 4e-62
Identities = 123/227 (54%), Positives = 150/227 (66%), Gaps = 7/227 (3%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXXXTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TALTQERKRRXRTLPXGLLAPXQIRXFLTLASHPGLHSXSVPGILSL 773
T LT ERK+R +T+P L+ P ++ + +ASH GLHS S+PGIL+L
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILAL 227
>BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 237 bits (580), Expect = 4e-62
Identities = 123/227 (54%), Positives = 150/227 (66%), Gaps = 7/227 (3%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXXXTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TALTQERKRRXRTLPXGLLAPXQIRXFLTLASHPGLHSXSVPGILSL 773
T LT ERK+R +T+P L+ P ++ + +ASH GLHS S+PGIL+L
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILAL 227
>AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein
NMP200 protein.
Length = 504
Score = 237 bits (580), Expect = 4e-62
Identities = 123/227 (54%), Positives = 150/227 (66%), Gaps = 7/227 (3%)
Frame = +3
Query: 114 MSLYCAISNXXXXXXXXXXTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 293
MSL C+ISN S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 294 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 473
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 474 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 632
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 633 TALTQERKRRXRTLPXGLLAPXQIRXFLTLASHPGLHSXSVPGILSL 773
T LT ERK+R +T+P L+ P ++ + +ASH GLHS S+PGIL+L
Sbjct: 181 TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILAL 227
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 35.5 bits (78), Expect = 0.25
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 C*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQC 580
C T + P RRS SC S T ARGP + G TPS P+ G SR+
Sbjct: 853 CPTPPRGRPCPQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRS 911
Query: 581 GSNRHVCGRGVS 616
+++ RG+S
Sbjct: 912 SASQGAGSRGLS 923
>AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.43
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H++ +PS HG G R S +H G G SS H + +G
Sbjct: 172 GSGSGQSPGHSQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 228
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 33.9 bits (74), Expect = 0.75
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 33.5 bits (73), Expect = 0.99
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 649
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
>AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.99
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 443 RRSVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQC 580
RR + C S T G A PR T S P+T+P G S +C
Sbjct: 300 RRLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRC 345
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 811 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 856
>BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 482 GDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 655
G G RGPR R +TP+ P G +RQ + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARQAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 656 APXPHP 673
A P P
Sbjct: 66 AGPPAP 71
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 711 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 756
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 100 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 145
>AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 497 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHV 598
RGPR GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 497 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHV 598
RGPR GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 461 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 592
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.5 bits (68), Expect = 4.0
Identities = 29/120 (24%), Positives = 43/120 (35%)
Frame = +2
Query: 383 HTETAVADC*TRIKSCTVPTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHG 562
HT T + T + + ++ T S + S T A T + STP TTP
Sbjct: 775 HTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIP 834
Query: 563 GVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPXPHPARXTAGTRXDQXIPHSRIASWSS 742
V + V+ + A TH P P+ T G PH+ +W+S
Sbjct: 835 PVLTTTATTPAATSSTVTPSSALGTTHT---PPVPNTTATTHGRSLSPSSPHTVCTAWTS 891
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 348 QDEWDALMLHAFT-QRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 524
+DE ++H Q+ +LQT ELSH + + ++ +I++LTK A + L LK Q
Sbjct: 1266 KDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKES---LISQLTKSKQALTQQLEELKRQ 1322
>D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein.
Length = 962
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 464 SPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 643
S H GG RG G S GG ++ S HV G G
Sbjct: 881 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 940
Query: 644 AGTEAPXPHP 673
G+ P PHP
Sbjct: 941 RGSRVPHPHP 950
>AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ46108 fis, clone TESTI2030519. ).
Length = 555
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +2
Query: 479 GGDGGARGPRHTET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 655
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 297 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 356
Query: 656 APXPHPARXTAGTR 697
AG R
Sbjct: 357 EKMRGAGGEDAGDR 370
>AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ40095 fis, clone TESTI2003940, weakly similar to
EBNA-1 NUCLEAR PROTEIN. ).
Length = 455
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +2
Query: 479 GGDGGARGPRHTET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 655
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 294 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 353
Query: 656 APXPHPARXTAGTR 697
AG R
Sbjct: 354 EKMRGAGGEDAGDR 367
>AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fusion
protein protein.
Length = 133
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +3
Query: 318 TSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAR 497
T + T++ +Q++WD + H +RQQL ++ + L + A +V+ + ++ + +
Sbjct: 61 TELTVTVERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK 120
Query: 498 EALATL 515
E T+
Sbjct: 121 EGPYTV 126
>AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein.
Length = 953
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +2
Query: 464 SPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 643
S H GG RG G S GG ++ S HV G G
Sbjct: 872 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 931
Query: 644 AGTEAPXPHP 673
G+ P PHP
Sbjct: 932 RGSRVPHPHP 941
>U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein.
Length = 215
Score = 30.7 bits (66), Expect = 7.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 497 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNR 592
RGPR GRHC P+ G CG R
Sbjct: 124 RGPRRAVAGGRHCIAPALEGAGPGCTGCGQGR 155
>X06290-1|CAA29618.1| 4548|Homo sapiens protein ( Human mRNA for
apolipoprotein(a). ).
Length = 4548
Score = 30.3 bits (65), Expect = 9.2
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 380 LHTETAVADC*TRIKSCTVPTRRSVSCDSPTHKGGDGGA-RGPRHTETAGRHC-STPSTT 553
L T T V D T S PT +S H GDG + RG T GR C S S T
Sbjct: 3647 LATLTVVPDPSTEASSEEAPTEQSPGVQDCYH--GDGQSYRGSFSTTVTGRTCQSWSSMT 3704
Query: 554 PH 559
PH
Sbjct: 3705 PH 3706
>DQ452068-1|ABF47086.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
Length = 2040
Score = 30.3 bits (65), Expect = 9.2
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 380 LHTETAVADC*TRIKSCTVPTRRSVSCDSPTHKGGDGGA-RGPRHTETAGRHC-STPSTT 553
L T T V D T S PT +S H GDG + RG T GR C S S T
Sbjct: 1139 LATLTVVPDPSTEASSEEAPTEQSPGVQDCYH--GDGQSYRGSFSTTVTGRTCQSWSSMT 1196
Query: 554 PH 559
PH
Sbjct: 1197 PH 1198
>AL596089-1|CAH73590.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
Length = 2040
Score = 30.3 bits (65), Expect = 9.2
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 380 LHTETAVADC*TRIKSCTVPTRRSVSCDSPTHKGGDGGA-RGPRHTETAGRHC-STPSTT 553
L T T V D T S PT +S H GDG + RG T GR C S S T
Sbjct: 1139 LATLTVVPDPSTEASSEEAPTEQSPGVQDCYH--GDGQSYRGSFSTTVTGRTCQSWSSMT 1196
Query: 554 PH 559
PH
Sbjct: 1197 PH 1198
>AL109933-1|CAI22905.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
Length = 2040
Score = 30.3 bits (65), Expect = 9.2
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 380 LHTETAVADC*TRIKSCTVPTRRSVSCDSPTHKGGDGGA-RGPRHTETAGRHC-STPSTT 553
L T T V D T S PT +S H GDG + RG T GR C S S T
Sbjct: 1139 LATLTVVPDPSTEASSEEAPTEQSPGVQDCYH--GDGQSYRGSFSTTVTGRTCQSWSSMT 1196
Query: 554 PH 559
PH
Sbjct: 1197 PH 1198
>AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ43098 fis, clone CTONG1000488. ).
Length = 221
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 581 GSNRHVCGRGVSSAGARHRTHAGTEAPXP 667
G R CG S A ARHR H+ T P P
Sbjct: 182 GPGRPHCGSCSSPAAARHRVHSLTHLPPP 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,793,397
Number of Sequences: 237096
Number of extensions: 2714148
Number of successful extensions: 8512
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8477
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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