Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L13
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 325 IDVALGGFGFTIGGVLISIRSSTLNSLPLIGSTPFSI 215
           +D+ LGG  +   G  +S  +  LN+ P IG   F I
Sbjct: 70  VDIVLGGLTYWAFGFAMSFGTDKLNN-PFIGMGEFLI 105


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 HDAACRVIARLTKEVTAAREALATLKPQAGIAAP 542
           H   CR + RLT++V  +  A   +    G+  P
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 HDAACRVIARLTKEVTAAREALATLKPQAGIAAP 542
           H   CR + RLT++V  +  A   +    G+  P
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 308 RFWLYYRWCFDLNKVLNSQLLAVNRIHAI 222
           + WL   W F+L K   +Q+  +  IH +
Sbjct: 226 KIWLRPDWLFNLTKYGKNQIKLLEIIHGL 254


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +2

Query: 458 CDSPTHKGGDGGARGPRHTETAGRHC 535
           C S  H    GGA    H E   R C
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRC 326


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,724
Number of Sequences: 438
Number of extensions: 4808
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)