Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L12
         (886 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7D2F8 Cluster: Major facilitator superfamily MFS_1; n=...    35   3.2  
UniRef50_UPI00015B625E Cluster: PREDICTED: similar to survivin; ...    33   7.3  
UniRef50_Q1HTP5 Cluster: X2R; n=1; Squirrelpox virus|Rep: X2R - ...    33   7.3  

>UniRef50_A7D2F8 Cluster: Major facilitator superfamily MFS_1; n=1;
           Halorubrum lacusprofundi ATCC 49239|Rep: Major
           facilitator superfamily MFS_1 - Halorubrum lacusprofundi
           ATCC 49239
          Length = 458

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 LCDFVDAATDPQDLQCADEASSEDGADPVSDLMDRISTTIG-DRW 489
           + D  D ATDP D   +D++  +DGAD   D   R +  +G  RW
Sbjct: 1   MADDGDGATDPDDASESDDSGVDDGADDGVDYAGRAAEILGFSRW 45


>UniRef50_UPI00015B625E Cluster: PREDICTED: similar to survivin; n=1;
            Nasonia vitripennis|Rep: PREDICTED: similar to survivin -
            Nasonia vitripennis
          Length = 4688

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
 Frame = +2

Query: 332  WLDERSAAAYAISWTR-LRTHRTSNARTRLLQRTGRTPFRT*WTEFRQQLGTDGSPASQH 508
            WL      A    W R +  H       R +  +     R  + + R++L    +P    
Sbjct: 4562 WLKRHEIVAQIEGWIRDMEMHGADRRSARTISLSALA-LRRHYKQLREELNKLPTPEGLE 4620

Query: 509  DVSAALRPPSRHDASRGADGSPS 577
            D++  LRPPS      G  G+PS
Sbjct: 4621 DLAEPLRPPSSPLEMSGTPGTPS 4643


>UniRef50_Q1HTP5 Cluster: X2R; n=1; Squirrelpox virus|Rep: X2R -
           Squirrelpox virus
          Length = 736

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
 Frame = +2

Query: 329 AWLDERSAAAYAISWTRLRTHRTSNARTRL--LQRTGRTPFRT*WTEFRQQLGTDGSPAS 502
           A  D  +  A A++   +RT +T   RT++  +  T  T  +T  T  R   G DGS  S
Sbjct: 9   AMADREARKARAMAIAMMRTRKTKRTRTKMKTMTMTMTTTTKTASTSMRIGDGDDGSTDS 68

Query: 503 QHDV---SAALRPPSRHDASRGADGS 571
            H     S     P+  D   G  GS
Sbjct: 69  SHGQDGRSDGTEEPTARDGDGGTGGS 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,284,382
Number of Sequences: 1657284
Number of extensions: 12413369
Number of successful extensions: 27762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27743
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)