Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L11
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   206   2e-53
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin ...    31   1.1  
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  206 bits (503), Expect = 2e-53
 Identities = 107/208 (51%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
 Frame = +2

Query: 77  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 250
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 251 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 430
           TR PR+V+V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 431 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVIS 610
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 611 DTGNVIGKHRKNHIPRVGDFNESNYYME 694
            TG VIG+ RKNHIPRVGDFNES YYME
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYME 215



 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +3

Query: 675 NPTTTWKGNT-GHPVFATRYGKIAVNICFGRHHVLNWMMFGXNGAEIVLIRXRXSPEKGX 851
           N +T +  +T GHPVF T+YG+I +NIC+GRHH  NWMM+  NGAEI+            
Sbjct: 208 NESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATVGALSE 267

Query: 852 QLXWNXEXRN 881
            L W  E RN
Sbjct: 268 PL-WGIEARN 276


>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
           protein T24A11.1b protein.
          Length = 1006

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 678 PTTTWKGNTGHPVFATR-YGKIAVNICFGRHHVLN 779
           P TTW+G +GH  +  + + K++V +   +HH  N
Sbjct: 813 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 847


>Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical
           protein T24A11.1a protein.
          Length = 938

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 678 PTTTWKGNTGHPVFATR-YGKIAVNICFGRHHVLN 779
           P TTW+G +GH  +  + + K++V +   +HH  N
Sbjct: 786 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 820


>AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin
           homologous protein 1 protein.
          Length = 930

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 678 PTTTWKGNTGHPVFATR-YGKIAVNICFGRHHVLN 779
           P TTW+G +GH  +  + + K++V +   +HH  N
Sbjct: 813 PNTTWEGESGHCAYCKKEFNKLSVYVEDRQHHCRN 847


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 639 RCFPITFPVSLMTTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 493
           +C P+TF ++   T +       F+++  IE+T I IA L+  +   V++
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 335 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 469
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 335 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 469
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 513 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 367
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 587 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 691
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,345,686
Number of Sequences: 27780
Number of extensions: 412763
Number of successful extensions: 1201
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)