Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L09
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 187 1e-47
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 38 0.007
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.027
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.048
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 34 0.11
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 34 0.11
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.3
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.3
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 187 bits (455), Expect = 1e-47
Identities = 84/127 (66%), Positives = 104/127 (81%)
Frame = +2
Query: 71 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 250
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 251 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 430
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 431 LLIVLDP 451
LL++ DP
Sbjct: 121 LLVISDP 127
Score = 111 bits (268), Expect = 5e-25
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Frame = +3
Query: 459 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 638
DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LRG +
Sbjct: 130 DHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKI 189
Query: 639 PRDQRW-----DVVVDLFFYHDPEESEKD 710
R + +++ DL+FY DP E+EK+
Sbjct: 190 SRQTGFVLEGKEIMPDLYFYRDPTETEKE 218
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCGTFHTGC 390
GC CC C R T R+ CCT C R C CG GC
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCCGC 130
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +1
Query: 250 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR---CYAYCGTFHTGC 390
GC CC + C R T R+ CCT C R C CG GC
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 131
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +1
Query: 250 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR---CYAYCGTFHTGC 390
GC CC C R T R+ CCT C R C CG GC
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 130
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = +1
Query: 250 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR---CYAYCGTFHTGC 390
GC CC C R T R+ CCT C R C CG GC
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 131
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.048
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 250 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 372
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -1
Query: 762 AXXXGLAVPQPVPWLVVHPFHFLQGHGRRTNQPQHPSAGHGEAHHEASTLHVPT 601
A GL P+P+P + P H GHG H GHG +H + PT
Sbjct: 158 AAENGLPAPEPIP--IPEPAH--TGHGHSHGGHGHSHGGHGHSHGHPAPTPAPT 207
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -1
Query: 762 AXXXGLAVPQPVPWLVVHPFHFLQGHGRRTNQPQHPSAGHGEAHHEASTLHVPT 601
A GL P+P+P + P H GHG H GHG +H + PT
Sbjct: 158 AAENGLPAPEPIP--IPEPAH--TGHGHSHGGHGHSHGGHGHSHGHPAPTPAPT 207
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 247 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTGCFY*PDPSC 414
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 130 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 306
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 307 TALRSACCTEV-CRAHRCYAYCGTFHTG 387
+ + + C+ C+ + T G
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQG 540
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 513 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 620
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 485 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 592
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 130 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 306
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 307 TALRSACCTEV-CRAHRCYAYCGTFHTG 387
+ + + C+ C+ + T G
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQG 540
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 130 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 306
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 307 TALRSACCTEV-CRAHRCYAYCGTFHTG 387
+ + + C+ C+ + T G
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSSTCTQG 540
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 564 TKSSHSIGLMWWLLA 608
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,639,184
Number of Sequences: 27780
Number of extensions: 485435
Number of successful extensions: 1222
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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