Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L08
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   1.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 344 QDNKLETPRLRGAEDASTIS 403
           Q NK+ TPR   AE AS++S
Sbjct: 147 QMNKVSTPRSSPAETASSLS 166


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -2

Query: 391 SIFGTSKPRSFKFIILQAIENSFKSSLPSAFVSASDHICPKTGGGS 254
           S+F  +     +F+    + N     +PS  VS S+   P  G G+
Sbjct: 60  SVFAANNAEFPEFVHSGMVHNDGTQLMPSPTVSGSEMSSPGAGSGN 105


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -2

Query: 391 SIFGTSKPRSFKFIILQAIENSFKSSLPSAFVSASDHICPKTGGGS 254
           S+F  +     +F+    + N     +PS  VS S+   P  G G+
Sbjct: 60  SVFAANNAEFPEFVHSGMVHNDGTQLMPSPTVSGSEMSSPGAGSGN 105


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 344 QDNKLETPRLRGAEDASTIS 403
           Q NK+ TPR   AE AS++S
Sbjct: 138 QMNKVSTPRSSPAETASSLS 157


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 18/72 (25%), Positives = 28/72 (38%)
 Frame = +3

Query: 177 EHFRNLGPVNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIIN 356
           E ++ +G    N  GEQA   +    + PP L  I  L           K   +A K+I 
Sbjct: 37  ERYKPIGVQIANRFGEQANEKIPLKDITPPDLEGILDLGRHENFSLFIPKHRKVAGKLIR 96

Query: 357 LKLRGLEVPKML 392
           + L    +  +L
Sbjct: 97  IFLAAESIDDLL 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 264  PVLGQIWSLADTNADG 311
            P+ GQ +SLAD N +G
Sbjct: 2066 PMYGQSFSLADNNQNG 2081


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 207 GNLTGEQAKRFMLQSQLPPPVLGQIWSL 290
           GN   E      L+++  PP L +IW +
Sbjct: 518 GNQNSEMCFSLKLKNKKLPPFLAEIWDV 545


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 247 CNINLFACSPVKFPLTGPRFLKCSENFACSCACIVHGSAIIS 122
           C++  FA S +   L     LK S      CA I  G+  I+
Sbjct: 53  CSVTFFALSELLTDLATSILLKVSSLLIGFCASIYVGTVWIN 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,913
Number of Sequences: 336
Number of extensions: 4331
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)