Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L08
(830 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 57 1e-08
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 50 2e-06
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 48 7e-06
06_03_1194 + 28305388-28305472,28305603-28305682,28305771-283058... 48 9e-06
02_01_0436 - 3166764-3166949,3167115-3167258,3167343-3167469,316... 44 2e-04
11_06_0610 - 25449085-25453284 34 0.16
08_02_1373 + 26512062-26512270,26513214-26513310,26513798-265139... 32 0.64
04_03_0914 + 20788103-20789642,20790036-20790529 31 0.85
01_01_1098 - 8691312-8692430,8692640-8693509,8694522-8696105,869... 31 0.85
12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927 29 3.4
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 4.5
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 29 4.5
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 29 6.0
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 29 6.0
01_04_0120 + 16242220-16242483,16242538-16243424,16244604-162452... 29 6.0
07_03_0043 - 12741661-12741816,12741980-12742153,12742870-127429... 28 7.9
06_03_1330 - 29375494-29376912 28 7.9
03_05_0656 - 26492473-26492671,26492919-26493164,26494076-264946... 28 7.9
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +3
Query: 87 TTAKVQRNVFNSEMMADPWT-IQAHEHAKFSEHFRNLG-PVNGNLTGEQAKRFMLQSQLP 260
T + V V NS A W + + K+++ F ++ +G +TG +A+ L +LP
Sbjct: 414 TVSGVSAGVSNS---ASQWPKVTQSDIQKYTKVFADVDRDRDGKITGAEARTLFLSWRLP 470
Query: 261 PPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLPPSL 404
+L Q+W L+D + DG L L+EF IA ++ G +P LP SL
Sbjct: 471 REILKQVWDLSDQDNDGMLSLREFCIALYLMERHRAGTPLPPALPDSL 518
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 204 NGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVP 383
+G +TGE+A+ L +LP +L ++W L+D + DG L +EF A ++ +P
Sbjct: 396 DGKITGEEARNLFLSWRLPRELLRKVWDLSDQDKDGMLSFREFCTAVYLMERHREQRPLP 455
Query: 384 KMLPPSLIA---SLSPTGR 431
+LP + A SL TG+
Sbjct: 456 DVLPDGIWAEGISLPSTGQ 474
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 165 AKFSEHFRNLG-PVNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIA 341
A F +FR +G ++G++A F S LP PVL QIW+ AD N G L ++F A
Sbjct: 3 AAFDAYFRAADLDRDGRISGQEAVAFFKASALPQPVLAQIWTYADKNRTGFLGREDFYNA 62
Query: 342 CKIINLKLRGLEV 380
+++ + G E+
Sbjct: 63 LRLVTVAQSGREL 75
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 204 NGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEV 380
+G +TG+ A +F S L P L Q+W++AD+ G L EF A ++++L G E+
Sbjct: 31 DGRVTGKDALKFFAMSNLSRPELKQVWAIADSKRQGYLGFSEFMTAMQLVSLAQAGNEI 89
>06_03_1194 +
28305388-28305472,28305603-28305682,28305771-28305839,
28305936-28305993,28306082-28306134,28306229-28306271,
28306360-28306421,28306914-28307027,28307183-28307285,
28307377-28307426,28308138-28308266,28308340-28308591,
28308684-28308763,28309040-28309166,28309247-28309390,
28309849-28310034
Length = 544
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 204 NGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVP 383
+G +TG A +F S+LP L Q+W++AD+ G L EF A ++++L G E+
Sbjct: 31 DGRITGPDAIKFFAMSKLPRADLKQVWAIADSKRQGYLGFSEFVTAMQLVSLAQAGDEIT 90
Query: 384 K-MLPPSLIASLSP 422
+ L + SL+P
Sbjct: 91 QDSLKRDDLGSLNP 104
>02_01_0436 -
3166764-3166949,3167115-3167258,3167343-3167469,
3167746-3167825,3167933-3168184,3168271-3168399,
3169039-3169088,3169221-3169323,3169429-3169548,
3169725-3169786,3169873-3169915,3169995-3170183,
3170299-3170367,3170460-3170539,3170648-3170723
Length = 569
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 204 NGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEV 380
+G +TG A +F S L L Q+W++ADT G L EF A ++++L G E+
Sbjct: 28 DGRVTGADATKFFAMSGLSRADLKQVWAIADTKRQGFLGFGEFVAAMQLVSLAQAGEEI 86
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +1
Query: 538 PTH*TTPLALLHPTCDPLRGQNPDEVRGLPRSTLQ-PDSAAHPKDAQPTELSRRIEGSET 714
PT T+P T P + P+E P S + P S AHP P+E S E+
Sbjct: 754 PTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEES 813
Query: 715 XAVSVRQSVRPPXQCRWCPEYPXDXNXP 798
+ +S PP P P + P
Sbjct: 814 SPPTPEKSPSPPSGHEGTPPSPVKSSSP 841
>08_02_1373 +
26512062-26512270,26513214-26513310,26513798-26513945,
26514301-26514458
Length = 203
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 267 VLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLPPSLIASLSPTGRG 434
+ G+ W L DT D ++ +E + C I + +R V L P L+ +P RG
Sbjct: 74 IFGRYWDLLDTTIDLNIEARESRVDCN-IQVWIRRQIVHGGLAPLLVGDAAPPFRG 128
>04_03_0914 + 20788103-20789642,20790036-20790529
Length = 677
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 273 GQIWSLADTNADGKLDLKEFSIACKI 350
G + L D DG++D+KE IACK+
Sbjct: 597 GDMGGLVDYRLDGEIDIKEAEIACKV 622
>01_01_1098 -
8691312-8692430,8692640-8693509,8694522-8696105,
8696199-8696258,8696336-8696414,8696494-8696555,
8697129-8697204,8697367-8697419,8698181-8698270,
8698411-8698458
Length = 1346
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 239 KSFRLFARQISIDRSKVSKVLRELRMLVCLYSPRVRHHF*IKDVSLNF 96
KS FA + S+D+S+ SKVL E+RML L P V + + S +F
Sbjct: 25 KSIEYFAVK-SVDKSQRSKVLNEVRMLHSLDHPNVLKFYSWYETSAHF 71
>12_02_0701 + 22271550-22271652,22272310-22272791,22272823-22272927
Length = 229
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 582 RSPPRSEPR*GKGVTAVNTTTRQRGSPQGR 671
R+PP+S R GKG AV +RQRG GR
Sbjct: 161 RAPPQSLVR-GKGAAAVAIRSRQRGGIGGR 189
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 416 KPHRPWAEPPTRFPRIRVRGVCETQRSAGVESSSRSQGF*GPPTKRLPWHSYTRRAIPSE 595
+P+ P+ PP + P G Q G Q PP ++ P H Y ++A P
Sbjct: 790 QPYPPYGAPPQQPPY----GAPSQQPPYGAPHPGHYQQ---PPHQQPPNHDYGQQAYP-- 840
Query: 596 VRTQMR*GGYRGQHYN 643
GG+RGQ+YN
Sbjct: 841 -------GGWRGQYYN 849
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 562 ALLHP-TCDPLRGQNPDEVRGLPRSTLQPDSAAHPKDAQPTELSRRIEGSETXAVSVRQS 738
A HP T P+ G N R LPR P P+ A ++ + ++G+ T +V+ +
Sbjct: 263 ATQHPQTSLPVLGSNNIHARPLPRPVGGPIVPLRPQMADSSQRGQLVQGAVT-SVTGSMA 321
Query: 739 VRPPXQCRWCP 771
RP Q P
Sbjct: 322 ARPTLQTNISP 332
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 195 GPVNGNLTGEQAKR---FMLQSQLPPPVLGQIWSLADTNADGKLDLKEF 332
G VNG LT + KR + L V+ I+ + DTN DG L +EF
Sbjct: 383 GKVNGLLTKQDLKRAAHHVCGVDLTDRVVDIIFHVFDTNHDGNLSSEEF 431
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 195 GPVNGNLTGEQAKR---FMLQSQLPPPVLGQIWSLADTNADGKLDLKEF 332
G VNG LT + KR + + L V+ I+ + D N DG L EF
Sbjct: 374 GKVNGLLTKQDLKRAATHVCEVDLTDKVVDVIFLVFDANRDGSLSADEF 422
>01_04_0120 +
16242220-16242483,16242538-16243424,16244604-16245264,
16245582-16245943,16246071-16246140,16246666-16246740
Length = 772
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 577 TCDPLRGQNPDEVRGLPRSTLQPDSAAHPKDAQPTELSRRIEGSETXAVSVRQSVRPP 750
TCDP NP G+P+ T DSA K+ QP ++ + E +T + + Q R P
Sbjct: 219 TCDPPY-PNPAGTNGMPKETSSTDSA--DKEIQPEKIVPQ-EYYDTRLLPLPQRSRKP 272
>07_03_0043 -
12741661-12741816,12741980-12742153,12742870-12742932,
12744107-12744214,12744303-12744418,12745188-12745314,
12746423-12746592,12747409-12747487,12747558-12747669,
12748064-12748154,12748425-12748534,12748536-12748666,
12749557-12749817
Length = 565
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 144 TIQAHEHAKFSEHFRNLG-PVNGNLTGEQAKRFMLQS---QLPPPVLGQIWSLADTNADG 311
T+ A E + + F + NG ++ E+ K+ + + +L P + +I D+N DG
Sbjct: 404 TLNAEELSDLRDQFNAIDVDKNGTISLEELKQALAKDVPWRLKGPRVLEIVEAIDSNTDG 463
Query: 312 KLDLKEFSIA 341
+D +EF A
Sbjct: 464 LVDFEEFVAA 473
>06_03_1330 - 29375494-29376912
Length = 472
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 458 RIRVRGVCETQRSAGVESSSRSQGF*GPPTKRLPWHSYTRRAIPS 592
R+R GVC +SA S++ PP LP++ RR PS
Sbjct: 36 RLRFPGVCTAWQSADAASATARFRAAQPPWLMLPFNPTARRQSPS 80
>03_05_0656 -
26492473-26492671,26492919-26493164,26494076-26494686,
26494919-26495251
Length = 462
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 493 SLSLTHTAHPYAREPRRRFGPRPVGLKEAIRDGG 392
SL L+ P E R G RP G +EA+R GG
Sbjct: 26 SLRLSPLLSPGDGEVAARGGQRPAGEEEAVRSGG 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,841,118
Number of Sequences: 37544
Number of extensions: 565662
Number of successful extensions: 1774
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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