Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L08
(830 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 6e-16
SB_43947| Best HMM Match : efhand (HMM E-Value=2e-11) 77 1e-14
SB_23986| Best HMM Match : efhand (HMM E-Value=0.0023) 77 1e-14
SB_39730| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_48245| Best HMM Match : efhand (HMM E-Value=0.086) 50 3e-06
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 34 0.12
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 33 0.38
SB_31565| Best HMM Match : efhand (HMM E-Value=3.4e-06) 32 0.50
SB_52406| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77) 30 2.0
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_37999| Best HMM Match : RVT_1 (HMM E-Value=7.5e-10) 30 2.6
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 30 2.6
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 2.6
SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08) 30 2.6
SB_20802| Best HMM Match : Phage_integr_N (HMM E-Value=1.2) 29 3.5
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 29 4.6
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_17836| Best HMM Match : rve (HMM E-Value=7.3e-14) 29 6.1
SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16) 28 8.1
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 81.8 bits (193), Expect = 6e-16
Identities = 38/91 (41%), Positives = 61/91 (67%)
Frame = +3
Query: 135 DPWTIQAHEHAKFSEHFRNLGPVNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGK 314
D W ++ + K+ E F+ LGPV+G L+G +AK+ M++S+LP LG+IW L+D + DG
Sbjct: 340 DTWVVEDFK-PKYDELFKTLGPVDGKLSGAKAKKEMVKSKLPNTQLGRIWKLSDIDHDGC 398
Query: 315 LDLKEFSIACKIINLKLRGLEVPKMLPPSLI 407
LD EF++A +I +KL ++P+ LP L+
Sbjct: 399 LDEDEFALAMYLIKVKLEDNDIPEELPVHLV 429
>SB_43947| Best HMM Match : efhand (HMM E-Value=2e-11)
Length = 482
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Frame = +3
Query: 141 WTIQAHEHAKFSEHFRNLGPVNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLD 320
W+++ + K+ F L PVNG L G++ K +L S+LP VLG++W L+D + DG LD
Sbjct: 32 WSVKPADKTKYDHIFEGLKPVNGLLPGDKVKPVLLNSKLPIDVLGRVWDLSDIDRDGMLD 91
Query: 321 LKEFSIACKIINLKLRGLEVP-----KMLPPSLIASLSPTGRGP 437
EF++A ++ L G VP +M+PPS P GP
Sbjct: 92 ADEFAVAMHLVYRALEGDMVPLTLPGRMVPPSKRKLKHPGSSGP 135
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 141 WTIQAHEHAKFSEHFRNLGP-VNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKL 317
W + A + K+ F+ +G ++GE+ K +QS L PVL IW L D G+L
Sbjct: 164 WVVPAADKLKYDSIFKTTDKDTDGLVSGEEVKNVFIQSGLAQPVLAHIWGLCDLTNSGRL 223
Query: 318 DLKEFSIACKIINLKLRGLEVPKMLPPSLI 407
+ ++F++A +I K+ G++ P+ L P +I
Sbjct: 224 NAEQFALAMYLIKQKVNGVDPPQKLTPEMI 253
>SB_23986| Best HMM Match : efhand (HMM E-Value=0.0023)
Length = 155
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Frame = +3
Query: 141 WTIQAHEHAKFSEHFRNLGPVNGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLD 320
W+++ + K+ F L PVNG L G++ K +L S+LP VLG++W L+D + DG LD
Sbjct: 16 WSVKPADKTKYDHIFEGLKPVNGLLPGDKVKPVLLNSKLPIDVLGRVWDLSDIDRDGMLD 75
Query: 321 LKEFSIACKIINLKLRGLEVP-----KMLPPSLIASLSPTGRGP 437
EF++A ++ L G VP +M+PPS P GP
Sbjct: 76 ADEFAVAMHLVYRALEGDMVPLTLPGRMVPPSKRKLKHPGSSGP 119
>SB_39730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +3
Query: 216 TGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLP 395
TGEQA+ ++S+LP L +IW LAD D LD+ EF+ A +I L+L+G ++P+ LP
Sbjct: 9 TGEQARSLFIRSRLPLAELSKIWKLADVTRDNFLDVSEFATAMHLIQLRLKGFDIPEKLP 68
Query: 396 PSL 404
+L
Sbjct: 69 STL 71
>SB_48245| Best HMM Match : efhand (HMM E-Value=0.086)
Length = 285
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 279 IWSLADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLPPSLIASLSPT 425
IWSL+D + DGK+ ++EF+IA +I KL+G E P +LP +L + P+
Sbjct: 37 IWSLSDIDRDGKMTMQEFTIAMHLIQNKLKGTEPPSVLPNTLKMTSLPS 85
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 273 GQIWSLADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLPPSLI 407
G + L+D N D L L+EF IA ++ GL++P LPP+L+
Sbjct: 316 GLLRHLSDINKDNALHLEEFCIAMHLVVAIRHGLDLPPTLPPTLL 360
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 204 NGNLTGEQAKRFMLQSQLPPPVLGQIWSLADTNADGKLDLKEFSIACKIINLKLRGLE 377
+G+L + +L S LP VLG+IW + + G+L L E + +I L G++
Sbjct: 505 DGSLDTNRLYPILLASGLPKDVLGKIWMQVNRESPGQLSLLELKMMLGLIALGQTGIK 562
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 288 LADTNADGKLDLKEFSIACKIINLKLRGLEVPKMLPPSLIASLSPT 425
L+D + DG+L+ EF +A +++ G +P ++PP L+ T
Sbjct: 3 LSDVDKDGQLNQDEFILAMHFVDMAKLGHTLPLVVPPELLTPAMQT 48
>SB_31565| Best HMM Match : efhand (HMM E-Value=3.4e-06)
Length = 129
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 267 VLGQIWSLADTNADGKLDLKEF 332
VLG +W+L D N DG LD EF
Sbjct: 1 VLGGLWNLLDVNGDGALDYGEF 22
>SB_52406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +3
Query: 486 LNDLQVLRAVRGPKDFRAHPLNDSPGTLTPDVRSPPRSEPR*GKGVTAVNTTTRQRGSPQ 665
++D+ V+ GPK + +D TL + SPP PR V N T R PQ
Sbjct: 137 VDDVSVILGESGPKKGESEDDDDVERTLARSI-SPPPLSPRQRSPVNGGNKTPENRKQPQ 195
Query: 666 ----GRPADG 683
G P +G
Sbjct: 196 WQKGGNPREG 205
>SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77)
Length = 673
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 282 WSLADTNADGKLDLKEFSIACKIINLKL-RGLEVPKMLPPSLIASLSPT 425
WSL T + G + + S AC +I L L L+ +LPP + SLS T
Sbjct: 479 WSLPPTLSQGTFNGRNGSNACSVIALCLGYALQEGLLLPPDVNKSLSET 527
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +1
Query: 553 TPLALLHPTCDPLRGQNPDEVRGLPRSTLQPDSAAHPKDAQPTELSRRIEGSETXAVSVR 732
+PLAL P P R Q PRS++ + PK+ + + RR GS ++
Sbjct: 100 SPLALSPPVSTP-RQQRHTPPSFTPRSSISRRRSDTPKNRRRISVPRRRAGSALGRLTTN 158
Query: 733 QSVRPPXQCRWCPEYPXDXNXPAGS 807
+ PP + + PAGS
Sbjct: 159 KKT-PPRRTNLLEAFRAAAGTPAGS 182
>SB_37999| Best HMM Match : RVT_1 (HMM E-Value=7.5e-10)
Length = 874
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 60 SLKSILLGQTTAKVQRNVFNSEMMADPWTIQAHEHAKFSEH-FRNLGPVN 206
SL S+++GQ + RN+ N+ TI H AK +H FRN+ +N
Sbjct: 665 SLPSLVVGQPIRRKSRNILNNT------TILEHLSAKLIKHIFRNISTIN 708
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +3
Query: 378 VPKMLPPSLIASLSPTGRGPNLLRGSRA*GCAVCVRLNDLQVLRAVRGPKDFRAHPLNDS 557
+P +P +I S P G+ P G R + + L + G +D P N
Sbjct: 536 IPPFVPGLIIPSRRP-GKRPGPRPGIRPGRGGRIPKPAVVYPLNGITGARDVTRRPNNGR 594
Query: 558 PGTLTPDVRSPPR 596
PG L PD R P R
Sbjct: 595 PGVLRPD-RGPDR 606
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 595 GQNPDEVRGLPRSTLQPDSAAHPKDAQPTELSRRIEGSETXAVSVRQSVRPPXQCRW 765
GQ P E++ +P A PK Q EL +EGS T + V S +P W
Sbjct: 2942 GQEPVEMQFQVPFETEPTDEAGPKFLQRLELKEVVEGSRTD-LEVEVSGKPKPVVEW 2997
>SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08)
Length = 857
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 628 RSTLQPDSAAHPK-DAQPTELSRRIEGSETXAVSVRQSVRPPXQCR 762
R T++ + +H K A+PT R GS + A S+ SVR P R
Sbjct: 232 RETVKKQTMSHQKPSAKPTPEPNRTMGSSSLANSMNLSVRKPTSAR 277
>SB_20802| Best HMM Match : Phage_integr_N (HMM E-Value=1.2)
Length = 566
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = -2
Query: 604 GSDLGGDRTSGVRVPGESFSGWALKSLGPRTALNTCRSLS----LTHTAHPYAREPR 446
G++LG RT G +P E S G T NTC SL+ L HT+ PR
Sbjct: 259 GAELGNKRTGGALMPSEG-------SRGGSTRSNTCSSLANSDILPHTSEMLIDHPR 308
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 534 RAHPLND--SPGTLTPDVRSPPRSEPR*GKGVTAVNTTTRQRGSPQGRP 674
R HP +PGT+T D R R P G NT R P P
Sbjct: 404 RRHPAPSPLTPGTITADTRHHHRRHPAPTPGTITANTRHHHRRHPAPSP 452
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.1 bits (62), Expect = 4.6
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Frame = +1
Query: 406 SPL*APQAVGRTSYEVPAHKGARCV*DSTICRC*EQFAVP-RILGPTH*TT--PLALLHP 576
SP P+ + S A + TI R ++F +P P +T PLA P
Sbjct: 50 SPPTPPEGISPLSSSSSASSSSAASPFHTIPR--DEFGIPLEFPSPPSLSTLSPLAASPP 107
Query: 577 TCDPLRGQNPDEVRGLPRSTLQPDSAAHPKDAQPTELSRRIEGSETXAVSVRQSVRPPXQ 756
P R Q PRS++ + PK + +SRR GS ++ ++ PP +
Sbjct: 108 VSTP-RQQRRTPSSFTPRSSISRRRSDTPKKRRRISVSRRRAGSALGRLTTKKKT-PPRR 165
Query: 757 CRWCPEYPXDXNXPAGS 807
+ PAGS
Sbjct: 166 TNLLEAFRAATCTPAGS 182
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +3
Query: 516 RGPKDFRAHPLNDSPGTLTPDVRSPPRSEPR*GKGVTAVNTTT-----RQRGSPQGRPAD 680
R K+ H L G P SE + + +A NTTT RQ+ + G+PA
Sbjct: 653 RAEKEHEEHMLTKVRGLSELSSTKSPNSETKKPRSTSAANTTTAPTQTRQKKTSAGKPAA 712
Query: 681 G 683
G
Sbjct: 713 G 713
>SB_17836| Best HMM Match : rve (HMM E-Value=7.3e-14)
Length = 713
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 197 TCQWKFDGRTSEKIYVTVSASSTGLGTNMVTGG 295
T + KF G K+ + ASSTGLGT ++ G
Sbjct: 106 TTEVKFLGHVVTKLVIQCDASSTGLGTVLLQEG 138
>SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16)
Length = 848
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 414 LSPTGRGPNLLRGSRA*GCAVCVRLNDLQVLRA 512
+SP+G P+ L G+ + G V + ND ++L A
Sbjct: 629 ISPSGASPDRLPGATSEGWVVTRKFNDFKILHA 661
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 282 WSLADTNADGKLDLKEF 332
W AD N DGK+D+ EF
Sbjct: 1425 WKKADVNQDGKIDVTEF 1441
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 582 RSPPRSEPR*GKGVTAVNTTTRQRGSPQGRPADG 683
R PPR P G+G RG P+G P G
Sbjct: 76 RGPPRGHPMRGRGAPYGRGGPPSRGPPRGPPLPG 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,058,874
Number of Sequences: 59808
Number of extensions: 593896
Number of successful extensions: 2098
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -