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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L06
         (909 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)         43   4e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)           42   5e-04
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               42   0.001
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)     40   0.004
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)         40   0.004
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)             38   0.011
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.011
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)           38   0.015
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               36   0.045
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               36   0.060
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)           36   0.060
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.14 
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               33   0.32 
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)                 33   0.42 
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)         32   0.74 
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)             31   1.3  
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               30   2.2  
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)             30   2.2  
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               29   3.9  
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)         29   3.9  
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)         29   5.2  
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)         28   9.1  
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               28   9.1  
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)         28   9.1  

>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
          Length = 373

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
 Frame = +1

Query: 133 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 297
           L  TY+++  P    D  + V L L L    ++ +   T+ ++  ++  W D RL WN  
Sbjct: 20  LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79

Query: 298 EW-GCSTWLVSSERLWRPDVVLLN 366
            + G    ++ + RLW PD+ L N
Sbjct: 80  AYDGVDNIVIKASRLWLPDITLYN 103


>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
          Length = 478

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +1

Query: 259 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 366
           + W++  LSWNA E+G  +T  V  +RLW PD+VL N
Sbjct: 77  VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYN 113


>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 541

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
           ++  LL  Y +++ P    +  + + L + LR   ++ E +  + I   ++  W D  L 
Sbjct: 35  LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94

Query: 286 WNAGEWG-CSTWLVSSERLWRPDVVLLNAXAT 378
           WN  ++G   +  ++ +R+W+PDV+L N  +T
Sbjct: 95  WNPDDFGGIKSINIAPDRVWKPDVLLYNRAST 126



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
           +++ L   Y +++ P    D  + + L + LR   ++ E E  +     ++  W D  L 
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512

Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLN 366
           WN  ++ G  + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540


>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
          Length = 342

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 187 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 363
           LTL+  H    ++E  ++    L+  W D RL+WN  E+ G     + S+ +W PD+ +L
Sbjct: 22  LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80

Query: 364 NA 369
           N+
Sbjct: 81  NS 82


>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
          Length = 445

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 238 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 369
           +++  + + W +  LSWNA E+ G S   VS +R W PD++L N+
Sbjct: 16  KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60


>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
          Length = 79

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 232 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 366
           T+R+    ++ W D +L W+  ++G    +V  ER  +W PDVVLLN
Sbjct: 32  TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78


>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 724

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 232 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 366
           T+R+    ++ W D +L W+  ++G    +V  ER  +W PDVVLLN
Sbjct: 32  TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78


>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
          Length = 123

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +1

Query: 97  ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 261
           ++   L L+ D     Y++   P  D  + V +   + +  + +     ++L     ++M
Sbjct: 27  QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86

Query: 262 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
           NW +  L WNA E+G    L +S   +W PD+VL N
Sbjct: 87  NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122


>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 716

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = +1

Query: 265 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NAXATTAGD-YALRAR 408
           W +  LSWNA E+ G S   +  ++LW+PD+ L  NA ++  G  Y  +A+
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAK 169


>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 548

 Score = 35.5 bits (78), Expect = 0.060
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +1

Query: 196 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 369
           HLR     +    V +   ++  W +  L+WN  ++ G  +  ++  ++W PD++L  NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165

Query: 370 XATTAG 387
             T AG
Sbjct: 166 DETYAG 171


>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
          Length = 362

 Score = 35.5 bits (78), Expect = 0.060
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 366
           + + W D RL WN  ++G   +++  S +LW PD+ L N
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYN 314


>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 686

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 205 HANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 366
           H  +  +  TV     L   W D  L+WN  ++ G  +  V    +W PD+VL N
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYN 253


>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 422

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAXAT 378
           +++ W D  L+WN  ++G   +  V    +W+PD++L N  +T
Sbjct: 26  IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPAST 68


>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 930

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
           L+M W D  L WN  ++G  T + + +  +W P V++ N
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYN 585


>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
          Length = 191

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 172 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 348
           K +V   LH + A +  S S VR+   +++ W +  L WN  ++G   T  V+   +W P
Sbjct: 69  KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126

Query: 349 DVVLLN 366
           D+VL N
Sbjct: 127 DIVLYN 132


>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
           + + W +  L+W+   +G  T + V   R+WRPD++L N
Sbjct: 75  IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYN 113


>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
          Length = 88

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 294
           +++ LL  YDR   P  +    V +TL L          T+  + D+   W +  L+WN 
Sbjct: 15  LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62

Query: 295 GEWG-CSTWLVSSERLWRPDVVL 360
            E+G   T  VS   +W PD+VL
Sbjct: 63  TEYGGLKTINVSPTIIWLPDIVL 85


>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 434

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 256 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
           +  W D  L W+  + G  T + V    LW+PD+VL N
Sbjct: 88  RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYN 125


>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
          Length = 156

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 265 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 366
           W ++ L+W+  E+G  ST  V+ +++W PD+ L N
Sbjct: 2   WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36


>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 705

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 360
           + + W++  L+W+   +G  T + V+   +W+PD+VL
Sbjct: 64  INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVL 100


>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 275

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
           + + W +  ++WN  E+G    + +    LW+PD+ L N
Sbjct: 44  MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYN 82


>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 648

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 265 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
           W D  L W+  ++       S + +W PDV L+N
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLIN 437


>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 137

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +1

Query: 145 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 309
           YD+   P  D+   V L + +   N   I E    V +   ++ NW D RL+ N  +   
Sbjct: 14  YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72

Query: 310 STWLVSSERLWRPDVVLLNAXA 375
           +      E++WRPD    NA A
Sbjct: 73  TFTRGDIEKVWRPDTYCSNAHA 94


>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
          Length = 137

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +1

Query: 145 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 309
           YD+   P  D+   V L + +   N   I E    V +   ++ NW D RL+ N  +   
Sbjct: 14  YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72

Query: 310 STWLVSSERLWRPDVVLLNAXA 375
           +      E++WRPD    NA A
Sbjct: 73  TFTRGDIEKVWRPDTYCSNAHA 94


>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
          Length = 428

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = +1

Query: 253 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 366
           +   W D  L WN     G     V    +W PD+ L+N
Sbjct: 28  IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66


>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
          Length = 479

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 265 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAXATTAG 387
           W +  L WN   +G    + VS  ++W PD+VL  NA A+T G
Sbjct: 40  WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDG 82


>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1758

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 244  LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
            + DLQ  W +  L+W+  ++G    + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506


>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 506

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 235 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 369
           + I+  + + W ++ L+W+   + G  T  + ++ +W PD+VL ++
Sbjct: 39  MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDS 84


>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
          Length = 229

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
 Frame = +1

Query: 100 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 267
           NA +LS+ I+  LA+YDR+  P+   + V + +  +  +  E  E+ +    D  L+  W
Sbjct: 15  NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74

Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
            D R   N  E   +     ++  W PD    N
Sbjct: 75  YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,528,633
Number of Sequences: 59808
Number of extensions: 333614
Number of successful extensions: 901
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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