Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L06
(909 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 44 5e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 41 5e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 41 5e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 39 2e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 38 6e-04
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 44.4 bits (100), Expect = 5e-06
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 279
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 280 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
W+ E+G T L V SE +W PD+VL N
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYN 126
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-06
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 133 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 303
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 304 G-CSTWLVSSERLWRPDVVLLN 366
G + +WRPDVVL N
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYN 127
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 43.2 bits (97), Expect = 1e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 279
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 280 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 366
L WN ++G T V SE +W PD+VL N
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 114
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 41.9 bits (94), Expect = 3e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +1
Query: 79 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 237
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 238 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
+ ++ W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 114
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 41.5 bits (93), Expect = 3e-05
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 369
WN E+G L ++ +LW+PDV++ N+
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 41.1 bits (92), Expect = 5e-05
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLN 366
W E+G L V S+ +WRPD+VL N
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYN 118
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 41.1 bits (92), Expect = 5e-05
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLN 366
W E+G L V S+ +WRPD+VL N
Sbjct: 91 WEPKEYGGVQMLHVPSDHIWRPDIVLYN 118
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 40.3 bits (90), Expect = 8e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLN 366
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 38.7 bits (86), Expect = 2e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 369
WN E+G L ++ +LW+PDV++ N+
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 37.5 bits (83), Expect = 6e-04
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAXATTAG 387
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN---NADG 121
Query: 388 DYALR 402
+Y +R
Sbjct: 122 NYEVR 126
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 37.5 bits (83), Expect = 6e-04
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 369
L++ W D + WN+ E+G L + RLW+PDV++ N+
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNS 98
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 37.5 bits (83), Expect = 6e-04
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 369
L++ W D L WN E+G L + R+W+PDV++ N+
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNS 130
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,837
Number of Sequences: 2352
Number of extensions: 10983
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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