Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L04
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 101 5e-22
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 99 3e-21
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 94 1e-19
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 93 2e-19
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 89 5e-18
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 86 3e-17
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 85 8e-17
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173... 74 1e-13
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 70 2e-12
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 67 1e-11
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 52 5e-07
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 48 9e-06
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 44 2e-04
05_04_0135 + 18322962-18323136,18323182-18323237,18323749-183238... 35 0.085
11_06_0754 - 26935647-26937780,26940890-26941827 29 5.6
06_02_0193 - 12874300-12874863 28 7.4
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 28 9.7
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 101 bits (243), Expect = 5e-22
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 116 LHY*CKTSTMVDHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGM 295
+ Y ++S + + L+EL +S N +CADC +PDP WAS N+G+FIC++C+ IHR +
Sbjct: 795 ISYVYESSMSLTDKMRKLKELLHKSENRICADCSSPDPKWASANIGVFICLKCSGIHRSL 854
Query: 296 GAHISKVKHLKLDRWEDSQVQRMKEV-GNITARNKYEERVP 415
G HISKV + LD W D ++ M EV GN A YE +P
Sbjct: 855 GTHISKVLSVTLDEWTDDEINSMLEVGGNSYANAIYEAFLP 895
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 167 LQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLDRWED 346
L+EL RS N +CADC PDP WAS N+G+FIC++C+ +HR +G HISKV + LD+W D
Sbjct: 14 LKELLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKVLSVTLDQWSD 73
Query: 347 SQVQRMKEV-GNITARNKYEERVP 415
+++ + EV GN A YE +P
Sbjct: 74 NEIDNVIEVGGNSHANAIYETFLP 97
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 94.3 bits (224), Expect = 1e-19
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +2
Query: 74 SSGDATYASGKRACLHY*CKTSTMVDHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLG 253
+SG + RA H+ +TS D K + L+K GNN+CADC +PDWAS NLG
Sbjct: 387 NSGSGYFDHSGRAIQHH--RTSMKPD---KPIDLLRKVVGNNICADCGAAEPDWASLNLG 441
Query: 254 IFICMRCASIHRGMGAHISKVKHLKLD--RWEDSQVQRMKEVGNITARNKYEERVP 415
I +C+ C+ +HR +G HISKV+ L LD WE S + + +GN A +E+ +P
Sbjct: 442 ILLCIECSGVHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLP 497
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +2
Query: 155 NQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLD 334
++K+L+ L + N CADC + P WAS NLGIFICM+C+ IHR +G HISKV+ LD
Sbjct: 15 HKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLD 74
Query: 335 RWEDSQVQRMKEVGNITARNKYEERVPP 418
W QV ++ +GN + + +E +PP
Sbjct: 75 TWLPEQVAFIQSMGNEKSNSYWEAELPP 102
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 88.6 bits (210), Expect = 5e-18
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 167 LQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLDRWED 346
L+ L + N +CADC PDP W S G+FIC++C+ HR +G HISKV +KLD W D
Sbjct: 53 LEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLDEWTD 112
Query: 347 SQVQRMKEVGNITARNK-YEERVP 415
QV + + G A N YE +P
Sbjct: 113 EQVDILADSGGNAAVNMIYEAFIP 136
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +2
Query: 164 LLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLD--R 337
+ L+ GN+ CA+C +PDPDWAS NLGI IC+ C+ HR +G HISKV+ L+LD
Sbjct: 355 IFNHLRNIPGNDSCAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVRSLRLDVKV 414
Query: 338 WEDSQVQRMKEVGNITARNKYEERVP 415
WE + E+GN + +E +P
Sbjct: 415 WEPVIMDLFHELGNDYTNSIWEAMLP 440
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 84.6 bits (200), Expect = 8e-17
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = +2
Query: 167 LQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLDRWED 346
L+ELQ ++GN C DC +P WAS + G+F+C+ C+ HRG+G HIS V+ + +D W +
Sbjct: 9 LRELQGQAGNKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWTE 68
Query: 347 SQVQRMKEVGN 379
+Q+++M+ GN
Sbjct: 69 AQLRKMEAGGN 79
>10_08_1021 -
22315487-22315493,22317051-22317154,22317227-22317328,
22317623-22317745,22318038-22318094,22318498-22318758,
22318948-22319377,22320168-22320286,22320515-22320595
Length = 427
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/91 (34%), Positives = 54/91 (59%)
Frame = +2
Query: 134 TSTMVDHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISK 313
+S D N + ++L+ +S N +C DC +P WAS G+F+C+ C+++HR +G H+S
Sbjct: 7 SSAAADKNT-VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSF 65
Query: 314 VKHLKLDRWEDSQVQRMKEVGNITARNKYEE 406
V+ LD W Q++ M GN A+ +++
Sbjct: 66 VRSTNLDSWTPEQLKMMVYGGNNRAQAFFKQ 96
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 70.1 bits (164), Expect = 2e-12
Identities = 28/81 (34%), Positives = 47/81 (58%)
Frame = +2
Query: 164 LLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLKLDRWE 343
+ + L+ + N +C DC +P WAS GIF+C+ C+++HR +G HI+ V+ LD W
Sbjct: 12 VFRRLKAKPENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWT 71
Query: 344 DSQVQRMKEVGNITARNKYEE 406
Q++ M GN A +++
Sbjct: 72 PDQLKMMAFGGNNRAHAFFKQ 92
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 67.3 bits (157), Expect = 1e-11
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2
Query: 158 QKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKV 316
+K + L+K GN +C DC + +PDWAS NLG +C+ C+ +HR +G HISK+
Sbjct: 450 EKPIDLLRKVDGNIICVDCGSMEPDWASLNLGALLCIECSGVHRNLGVHISKL 502
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/84 (29%), Positives = 46/84 (54%)
Frame = +2
Query: 149 DHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLK 328
+ N+K+++ L K N C +C + P + N FIC+ C+ IHR H +VK +
Sbjct: 8 ERNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF-TH--RVKSVS 64
Query: 329 LDRWEDSQVQRMKEVGNITARNKY 400
+ ++ +V+ +++ GN AR+ Y
Sbjct: 65 MAKFTTQEVRSLEQGGNQRARDIY 88
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +2
Query: 149 DHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLK 328
+ N++ ++ L K GN C +C + P + + F+C+ C+ IHR H +VK +
Sbjct: 9 ERNERAIRALLKLPGNRRCINCNSLGPQYVCTSFSTFVCVSCSGIHREF-TH--RVKSIS 65
Query: 329 LDRWEDSQVQRMKEVGNITARNKY 400
+ ++ +V ++E GN + Y
Sbjct: 66 MAKFTSQEVSALQEGGNERGKEIY 89
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/84 (25%), Positives = 42/84 (50%)
Frame = +2
Query: 149 DHNQKLLQELQKRSGNNVCADCLNPDPDWASYNLGIFICMRCASIHRGMGAHISKVKHLK 328
+ N+++++ L K N C +C P + + F+C+ C+ IHR H +VK +
Sbjct: 11 ERNERVVRGLLKLPPNRRCINCNGLGPQYVCTSFWTFVCISCSGIHREF-TH--RVKSVS 67
Query: 329 LDRWEDSQVQRMKEVGNITARNKY 400
+ + +V+ ++ GN AR +
Sbjct: 68 MSTFTTQEVEALQNGGNQRARESF 91
>05_04_0135 +
18322962-18323136,18323182-18323237,18323749-18323885,
18324679-18324865,18324958-18325080,18325828-18326112
Length = 320
Score = 34.7 bits (76), Expect = 0.085
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 167 LQELQKRSGNNVCADCLNPDPDWA 238
L+ L K+ N CADC PDP WA
Sbjct: 100 LEHLLKQPANKFCADCGTPDPKWA 123
>11_06_0754 - 26935647-26937780,26940890-26941827
Length = 1023
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 109 TLAASVRRVATRKSNSSNERGLWHTARXRER 17
T AS AT ++SS+ WHT R RER
Sbjct: 173 TSTASSSTAATGDASSSSSTICWHTTRFRER 203
>06_02_0193 - 12874300-12874863
Length = 187
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 254 IFICMRCASIHRG---MGAHISKVKHLKLDRWEDSQVQRMK 367
++IC+ C+ +HR M AH H++ D E V+ +K
Sbjct: 42 VYICVECSEVHRNQQTMAAHCR--SHIRSDGMEKGTVRHIK 80
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 314 VKHLKLDRWEDSQVQRMKEV-GNITARNKYEERVP 415
V + LD W DS + M E+ GN A + YE +P
Sbjct: 3 VLSVTLDDWSDSDIDSMLEIGGNSYANSIYESFLP 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,929,052
Number of Sequences: 37544
Number of extensions: 377122
Number of successful extensions: 750
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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