Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L03
(861 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 62 7e-12
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 60 2e-11
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 59 4e-11
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 56 3e-10
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 56 3e-10
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 38 1e-04
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.33
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 24 1.3
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.2
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.5
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.5
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 61.7 bits (143), Expect = 7e-12
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ LTL + ++ E + A L + W D L WN E+G
Sbjct: 19 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKD 77
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PDV++ N+A G + V +NGS ++ + M + +P
Sbjct: 78 LRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPF 137
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 138 DDQHCDMKFGSWTYDGNQLD 157
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 60.1 bits (139), Expect = 2e-11
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ LTL + ++ E + A L + W D L WN E+G
Sbjct: 19 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKD 77
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PDV++ N+A G + V +NGS ++ + + + +P
Sbjct: 78 LRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPF 137
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 138 DDQHCDMKFGSWTYDGNQLD 157
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 59.3 bits (137), Expect = 4e-11
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ LTL + ++ E + A L + W D L WN E+G
Sbjct: 19 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKD 77
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PDV++ N+A G + V + GS ++ + M + +P
Sbjct: 78 LRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPF 137
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 138 DDQHCDMKFGSWTYDGNQLD 157
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 56.4 bits (130), Expect = 3e-10
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ LTL + ++ E + L + W D L WN E+G
Sbjct: 19 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKD 77
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PDV++ N+A G + V + GS ++ + M + +P
Sbjct: 78 LRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPF 137
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 138 DDQHCDMKFGSWTYDGNQLD 157
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 56.4 bits (130), Expect = 3e-10
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ LTL + ++ E + L + W D L WN E+G
Sbjct: 19 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGGVKD 77
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PDV++ N+A G + V + GS ++ + M + +P
Sbjct: 78 LRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPF 137
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 138 DDQHCDMKFGSWTYDGNQLD 157
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 37.9 bits (84), Expect = 1e-04
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Frame = +1
Query: 151 GTPPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 327
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 61 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYGKRP-GVETLSVG 115
Query: 328 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 480
SE +W PD +N ATT+ ++ RV ++GS++ RL I+ M L
Sbjct: 116 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSITRSIRLTITASCPMNLQ 172
Query: 481 NWPNDMQTCTFKFGS 525
P D Q C + S
Sbjct: 173 YLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 394 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 597 LPDSNILYILLSIXEIHFVTIVHPRTELERASLHVVGPIV 478
+ D N+L ++++I E +T P+T + +L VV +V
Sbjct: 1 MTDHNLLRLIVTIGEFFAMTPSRPKTRAKIYALCVVTALV 40
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 441 LYPG-DGAVIRYTGAESVVPGGGC 373
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 293 QGSGAAALGWCPRN 334
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 95 AFCRTSYSTSEEKR*QNNIS 36
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,268
Number of Sequences: 336
Number of extensions: 3780
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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