Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L03
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 2e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 59 6e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 1e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 3e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 6e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.004
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.032
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.90
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 64.9 bits (151), Expect = 9e-13
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 KFGSRMHNSDEM 549
KFGS N D++
Sbjct: 168 KFGSWTFNGDQV 179
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +1
Query: 124 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 303
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 304 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 477
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 478 DNWPNDMQTCTFKFGSRMHNSDEMD 552
+P D Q C KFGS ++ +++D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +1
Query: 124 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 303
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 304 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 477
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 478 DNWPNDMQTCTFKFGSRMHNSDEMD 552
+P D Q C KFGS ++ +++D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L ++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 315
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 316 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 552
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 345
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 346 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 523 SRMHNSDEMD 552
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 417
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 552
G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 315
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 316 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 315
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 316 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 315
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 316 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPF 120
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ +++D
Sbjct: 121 DDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.5 bits (140), Expect = 2e-11
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = +1
Query: 175 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 342
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 343 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 519
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 520 GSRMHNSDEMDFGD*QKNI 576
GS ++ ++D +N+
Sbjct: 164 GSWTYDGIQIDLKHINQNM 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 345
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 346 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 514 KFGSRMHNSDEMD 552
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.8 bits (136), Expect = 6e-11
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 318
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 319 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 493 DMQTCTFKFGSRMHNSDEMD 552
D Q C KFGS ++ ++D
Sbjct: 158 DDQRCEMKFGSWTYDGFQLD 177
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.4 bits (130), Expect = 3e-10
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Frame = +1
Query: 157 PPPDSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 327
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 328 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 499 QTCTFKFGSRMHNSDEMD 552
C FGS +H+ +E++
Sbjct: 181 HRCRINFGSWVHSGEEVN 198
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 6e-10
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +1
Query: 142 RTIGTPPPDSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 315
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 316 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 483
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 484 WPNDMQTCTFKFGSRMHNSDEMD 552
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 526 RMHNSDEMD 552
++ +++
Sbjct: 152 WTYDGYQLE 160
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 578 CIFFCQSPKSISSLLCILEPNLNV 507
C+FF + S + +LC P+ N+
Sbjct: 434 CVFFLTTIVSTTVILCGSPPSANI 457
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 384
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +1
Query: 157 PPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 333
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 334 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQ 501
+W PD+V+ + + ++ V N+G++ + TP+ + D+ WP D+
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDIL 171
Query: 502 TCTFKFGSRMHNSDEM 549
CT S H S+E+
Sbjct: 172 NCTIHIASWSHGSNEI 187
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.0 bits (114), Expect = 3e-08
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
Frame = +1
Query: 142 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 312
R G D +V + L +R A I + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 483
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 484 WPNDMQTCTFKFGSRMHNSDEMDF 555
+P D Q C+ + S +D++ F
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 393
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 394 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+ R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Frame = +1
Query: 142 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 312
R G D VV + + +R + I + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 483
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 484 WPNDMQTCTFKFGSRMHNSDEMDF 555
+P D Q C+ + S +D++ F
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 393
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 394 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Frame = +1
Query: 124 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 297
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 298 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 471
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 472 QLDNWPNDMQTCTFKFGS 525
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.5 bits (88), Expect = 4e-05
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Frame = +1
Query: 124 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 297
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 298 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 471
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 472 QLDNWPNDMQTCTFKFGS 525
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.5 bits (88), Expect = 4e-05
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Frame = +1
Query: 124 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 297
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 298 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 471
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 472 QLDNWPNDMQTCTFKFGS 525
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Frame = +1
Query: 151 GTPPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 327
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 328 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 480
SE +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 481 NWPNDMQTCTFKFGS 525
+P D Q C + S
Sbjct: 144 YFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 384
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 385 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 555
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 502 TCTFKFGSRMHNSDEMDF 555
C + S H +DEM F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 175 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 348
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 349 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 522
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 523 S 525
S
Sbjct: 257 S 257
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 32.3 bits (70), Expect = 0.006
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = -1
Query: 726 GXRPPEXXXGXXPERHXGTXPGEXPPXHGPXXAPXWTXPSHPTLPDSNILYILLSIXEIH 547
G +P P+R P + PP GP AP PS + ++ ++ + + + H
Sbjct: 22 GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQLLQQH 81
Query: 546 FVTIVHPRTELERASLHV 493
++ ++ +++ SL++
Sbjct: 82 ILSPTQLQSFMQQHSLYL 99
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 318 PSAAAPLPCVPTQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 337 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 508 TFKFGSRMHNSDEM 549
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.032
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 336
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 501
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 502 TCTFKFGSRMHNSDEM 549
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 39 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 143
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,299
Number of Sequences: 438
Number of extensions: 4743
Number of successful extensions: 92
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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