Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L02
(823 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 270 3e-71
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 80 8e-14
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 71 5e-11
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 62 2e-08
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 57 5e-07
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 55 2e-06
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 49 1e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 47 7e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 47 7e-04
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 47 7e-04
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 45 0.003
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 44 0.006
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 42 0.014
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 42 0.014
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 40 0.075
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.6
UniRef50_UPI0000F21F11 Cluster: PREDICTED: hypothetical protein,... 35 2.1
UniRef50_UPI0000DD78E5 Cluster: PREDICTED: hypothetical protein;... 35 2.8
UniRef50_Q108X2 Cluster: Expressed protein; n=2; Oryza sativa (j... 34 3.7
UniRef50_Q4RVQ9 Cluster: Chromosome 9 SCAF14991, whole genome sh... 34 4.9
UniRef50_Q9SZ15 Cluster: Putative uncharacterized protein F10M23... 33 8.6
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 270 bits (662), Expect = 3e-71
Identities = 139/175 (79%), Positives = 141/175 (80%)
Frame = +1
Query: 19 MEXIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXX 198
ME IVPL VSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAP 60
Query: 199 XXXXXXXXXXXXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 378
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE
Sbjct: 61 PPPLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 120
Query: 379 AVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLP 543
AVVFPSAPSLKIPVTVDLCWTTADVTVEG NVLATPSS+RIT+GGLALMHQATLP
Sbjct: 121 AVVFPSAPSLKIPVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLP 175
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/48 (64%), Positives = 33/48 (68%)
Frame = +3
Query: 585 IPYTNHPRLNIHFHQSPERRTXREFAPGLKPPVVIRGSISVSHPSSLG 728
IPYTNHPRLNIHFHQS + G+K VVIRGSISVSHP G
Sbjct: 189 IPYTNHPRLNIHFHQSAD-AVLEGVRAGVKASVVIRGSISVSHPLVTG 235
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/64 (48%), Positives = 34/64 (53%)
Frame = +2
Query: 542 PGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKGVRAGVKASGCHQRLHQRISPLV 721
P DLGYINPIIKSP P+ F +GVRAGVKAS + PLV
Sbjct: 175 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSA-DAVLEGVRAGVKASVVIRGSISVSHPLV 233
Query: 722 TGHG 733
TGHG
Sbjct: 234 TGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 79.8 bits (188), Expect = 8e-14
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLP 543
DLCWT VT +L+ + RI G + LP
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLP 166
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 70.5 bits (165), Expect = 5e-11
Identities = 33/89 (37%), Positives = 51/89 (57%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGG 513
D W ++ V++ G +L+T +R+T GG
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGG 159
Score = 34.3 bits (75), Expect = 3.7
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Frame = +3
Query: 405 PQNTSHS*PLLDYC*RHS*RSQCAGHPFILSHYYWR---SRPYASSHPPLAISATSTRSS 575
P+N S++ P+ HS G + ++ R P SS+P I RS+
Sbjct: 119 PKNPSYTYPMSFDAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNP--IILPADLRST 176
Query: 576 NP----RIPYTNHPRLNIHFHQSPERRTXREFAPGLKPPVVIRGSISVS 710
NP + Y N P+L + FH++ + P + +VIRG + S
Sbjct: 177 NPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 421 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 513
DL W ++ + +L T +R T+GG
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGG 121
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/94 (31%), Positives = 49/94 (52%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMH 528
DL W+T +V + +L +R IGG L H
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSH 1912
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGG 513
L W A T +L T +I++GG
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGG 132
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 537
WT A ++ + + T+GG LM T
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTT 2129
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/89 (33%), Positives = 42/89 (47%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGG 513
L W + T ++L IGG
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGG 124
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +1
Query: 280 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 459
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 460 EGVNVLATPSSSRITIGG 513
++L S T GG
Sbjct: 104 SPTDILKIYGGSSYTFGG 121
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 46.8 bits (106), Expect = 7e-04
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGG 513
+CW A+ V + T IGG
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGG 120
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +1
Query: 304 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 483
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 484 PSSSRITIGG 513
R IGG
Sbjct: 112 YGGQRFLIGG 121
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/97 (26%), Positives = 40/97 (41%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 537
WT A + L +T+GG LM T
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVT 2004
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 42.3 bits (95), Expect = 0.014
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 421 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 513
+V L W + T +L +GG
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGG 120
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 42.3 bits (95), Expect = 0.014
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +1
Query: 241 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 415 PVTVDLCWTTAD--VTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPEF 588
P+TV L W A+ T + L +GG A+ T+ L + + +
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGG-AISAAKTIEVPLNLDSVNRMLKDS 147
Query: 589 HTPT-TPDLTSISINPLN 639
T T TP L + S P N
Sbjct: 148 VTYTDTPKLLAYSRAPTN 165
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 39.9 bits (89), Expect = 0.075
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +1
Query: 271 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 450
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 451 VTVEGVNVLATPSSSRITIGGLALMHQA---TLPWRSRLHQPDHQIPEFHTPTTPDLTSI 621
+T T + + +T ALM A T+P + L P + PT DLT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETATALTVPTATDLTVP--TATDLTVPTATDLTVP 632
Query: 622 SINPL 636
++ L
Sbjct: 633 TVTDL 637
Score = 37.5 bits (83), Expect = 0.40
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Frame = +1
Query: 295 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 474
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 475 LATPSSSRITIGGLALMHQA---TLPWRSRLHQP---DHQIPEFHTPTTPDLTSISINPL 636
+ T ++ + ALM A T+P + L P D +P T P T++++
Sbjct: 722 METATALTVPT-ATALMETATALTVPTATALMVPTATDLTVPTATALTVPTATALTVPTA 780
Query: 637 NAV 645
A+
Sbjct: 781 TAL 783
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 325 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRI 501
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_UPI0000F21F11 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 370
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 519 PYASSHPPLAISAT---STRSSNPRIPY----TNHPRLNIHFHQSPERRTXRE-FAPGLK 674
P + PPL + + ++R+S P Y TN P NI HQ+P T E P
Sbjct: 83 PVHGAQPPLTLKNSMVQASRTSKPSATYFPSSTNAPSCNISIHQTPSSGTTSEPQCPSGP 142
Query: 675 PPVVIRGSISVSH 713
P ++ S+S +H
Sbjct: 143 PAAELKPSVSCTH 155
>UniRef50_UPI0000DD78E5 Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 270
Score = 34.7 bits (76), Expect = 2.8
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +3
Query: 483 PFILSHYYWRSRPYASSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTXREFA 662
P L H + + P PPL ++ TST PR P P+ + F +P R A
Sbjct: 74 PVPLQHLFPLALP---QQPPLLLNPTST--PRPR-PLRLSPQ-QLQFPSAPPLHLPRSPA 126
Query: 663 PGLKPPVVIRGSISVSHPSSL 725
PG P + R + +SHP L
Sbjct: 127 PGAPPQPLPRSQLLLSHPQQL 147
>UniRef50_Q108X2 Cluster: Expressed protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 122
Score = 34.3 bits (75), Expect = 3.7
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2
Query: 524 CIKPPSPGDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXKGVRAGVKASGCH 688
C PP+PG G + I + N PP+ +P P IP PY + R A GC+
Sbjct: 64 CDAPPAPGRAGAADAIGR--NGALNPPR--YPVPRIPGEPYTRPGRGCTVAYGCY 114
>UniRef50_Q4RVQ9 Cluster: Chromosome 9 SCAF14991, whole genome shotgun
sequence; n=2; Tetraodon nigroviridis|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1677
Score = 33.9 bits (74), Expect = 4.9
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 519 PYASSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSPERRTXREFAPGLKPP--VVIR 692
P A PP A +A S S P+ P+ HP + P + A G+ PP
Sbjct: 958 PSAPPLPPSAAAAASHPSGPPQPPFATHPFSAVLPAAGPPPSSSGSMA-GVPPPSSSAPS 1016
Query: 693 GSISVSHPSSLGMAKXGFA-PLFQVNDE 773
SIS+ P+S+G A G A P + +E
Sbjct: 1017 SSISMPLPASVGCAGPGPALPPIHIKEE 1044
>UniRef50_Q9SZ15 Cluster: Putative uncharacterized protein
F10M23.90; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F10M23.90 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 421
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 483 PFILSHYYWRSRPYASSHPPLAISATSTRSSNPRIPYTNHPRLNI 617
P SHY Y+S H A S+TS S+ P PY+++ R+NI
Sbjct: 308 PHYPSHYQNPEPYYSSPHSAPAPSSTSFSSAPPPPPYSSNGRINI 352
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,357,100
Number of Sequences: 1657284
Number of extensions: 16039912
Number of successful extensions: 44678
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44618
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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