Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K24
(953 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA... 44 0.004
UniRef50_A7RFJ5 Cluster: Predicted protein; n=2; Nematostella ve... 42 0.023
UniRef50_A0EIZ9 Cluster: Nicotinic acetylcholine receptor beta2 ... 39 0.16
UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;... 37 0.66
UniRef50_Q7PTU5 Cluster: ENSANGP00000015420; n=2; Anopheles gamb... 37 0.66
UniRef50_O44497 Cluster: Putative uncharacterized protein; n=2; ... 37 0.66
UniRef50_Q67X94 Cluster: Putative uncharacterized protein lgc-2;... 37 0.87
UniRef50_Q19351 Cluster: Ligand-gated ion channel protein 3; n=3... 36 1.2
UniRef50_Q60KR8 Cluster: Putative uncharacterized protein CBG239... 36 2.0
UniRef50_Q7PJX0 Cluster: ENSANGP00000022703; n=1; Anopheles gamb... 35 2.7
UniRef50_Q2XWK6 Cluster: Nicotinic acetylcholine receptor subuni... 35 2.7
UniRef50_Q0GQR6 Cluster: GABA-gated ion channel; n=2; Apis melli... 35 2.7
UniRef50_Q93323 Cluster: Putative uncharacterized protein lgc-21... 35 3.5
UniRef50_Q17BK7 Cluster: Nicotinic acetylcholine receptor, beta-... 35 3.5
UniRef50_UPI00015B5C4C Cluster: PREDICTED: similar to GABA-gated... 34 4.6
UniRef50_Q9N4M3 Cluster: Acetylcholine receptor protein 6; n=1; ... 34 4.6
UniRef50_Q2XWK8 Cluster: Nicotinic acetylcholine receptor subuni... 34 4.6
UniRef50_A3RK74 Cluster: Fox family transcription factor FoxO1a.... 34 6.1
UniRef50_Q4W520 Cluster: Putative uncharacterized protein; n=1; ... 34 6.1
UniRef50_Q22085 Cluster: Putative uncharacterized protein lgc-17... 34 6.1
UniRef50_P48182 Cluster: Acetylcholine receptor subunit beta-typ... 34 6.1
UniRef50_Q8TA51 Cluster: Putative uncharacterized protein; n=3; ... 33 8.1
UniRef50_Q24352 Cluster: Gamma-aminobutyric acid receptor alpha-... 33 8.1
UniRef50_Q23022 Cluster: Acetylcholine receptor subunit alpha-ty... 33 8.1
>UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11822-PA, isoform A - Tribolium castaneum
Length = 438
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRDSPP-----DSKIVXNLTLHLRHANIRESXSTVRIQADLQMN 272
N+T + LL YD+ + P +K+V LT+ RH + E ST+ + + ++++
Sbjct: 36 NSTVTDKLRQDLLLNYDKFARPAQHYNTTKVVFGLTI--RHIELNEFKSTLVVHSWIRLS 93
Query: 273 WIDKRLSWNAGEW-GCSTWLVSSERLWE 353
W D++L WN+ + G T ++ +W+
Sbjct: 94 WKDEKLQWNSTNYGGLETLNLADHEIWQ 121
>UniRef50_A7RFJ5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 328
Score = 41.9 bits (94), Expect = 0.023
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 126 LMIDSLLATYDRDSPP--DSKIVXNLTLHL-RHANIRESXSTVRIQADLQMNWIDKRLSW 296
+++ L YDRD P ++ +V L R A + E + V L+ W++ LSW
Sbjct: 8 ILLRYLFTNYDRDIHPGGNNPVVVTFGAKLGRIAAVDEKNNVVLAHWYLKQKWVNPSLSW 67
Query: 297 NAGEW-GCSTWLVSSERLW 350
NA E+ G +T V +RLW
Sbjct: 68 NASEFGGVNTLHVEPDRLW 86
>UniRef50_A0EIZ9 Cluster: Nicotinic acetylcholine receptor beta2
subunit; n=1; Apis mellifera|Rep: Nicotinic
acetylcholine receptor beta2 subunit - Apis mellifera
(Honeybee)
Length = 427
Score = 39.1 bits (87), Expect = 0.16
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +3
Query: 102 CENATSLSLMIDS---LLATYDRDSPPDSKIVXNLT--LHLRHANIRESXSTVRIQADLQ 266
C++ TS S + L YDRD P+ K + L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 267 MNWIDKRLSWNAGEW-GCSTWLVSSERLW 350
+ W L+W + E+ ++ V S +W
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIW 116
>UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lev-8 - Caenorhabditis elegans
Length = 531
Score = 37.1 bits (82), Expect = 0.66
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 120 LSLMIDSLLATYDRDSPPDSKIVXNLTLHL-----RHANIRESXSTVRIQADLQMNWIDK 284
+S ++++LL Y++ P L + R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 285 RLSWNAGEWGCSTWL-VSSERLW 350
+L+WN +WG ++ + S+++W
Sbjct: 89 KLTWNPTDWGGVEYIHIPSDQIW 111
>UniRef50_Q7PTU5 Cluster: ENSANGP00000015420; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015420 - Anopheles gambiae
str. PEST
Length = 238
Score = 37.1 bits (82), Expect = 0.66
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 219 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 350
+I E S + Q + M W D L+WNA +W T L ++++ +W
Sbjct: 72 DISEYRSVMSFQVNYYMRWQDSSLAWNASDWSNITTLNINNDEIW 116
>UniRef50_O44497 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 445
Score = 37.1 bits (82), Expect = 0.66
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +3
Query: 90 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVXNLTLHLRHANIRESXSTVRIQADLQM 269
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 270 NWIDKRLSWNAGEWGCSTWL 329
+W D +SW+ +WG S WL
Sbjct: 114 SWNDTMVSWDKEQWGLS-WL 132
>UniRef50_Q67X94 Cluster: Putative uncharacterized protein lgc-2;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein lgc-2 - Caenorhabditis elegans
Length = 509
Score = 36.7 bits (81), Expect = 0.87
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTLHLRHA-NIRESXSTVRIQADLQMNWIDKRLSWNAG 305
+ + LL+ ++ ++PPD + L L H I E T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 306 EWG--CSTWLVSSERLW 350
+G TW + +++W
Sbjct: 130 LFGGITKTW-IPLDKIW 145
>UniRef50_Q19351 Cluster: Ligand-gated ion channel protein 3; n=3;
Caenorhabditis|Rep: Ligand-gated ion channel protein 3 -
Caenorhabditis elegans
Length = 355
Score = 36.3 bits (80), Expect = 1.2
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +3
Query: 75 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVXNLTLHLRHA-NIRESXSTVRI 251
T +A +E +S S + LL +++ SPPD ++ + + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 252 QADLQMNWIDKRLSWNAGEW-GCS-TWL 329
+ W D LSW E+ G TWL
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKHTWL 142
>UniRef50_Q60KR8 Cluster: Putative uncharacterized protein CBG23934;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG23934 - Caenorhabditis
briggsae
Length = 551
Score = 35.5 bits (78), Expect = 2.0
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +3
Query: 90 SAAECENATSLSLMIDSLLATYDRDS-PPDSKIVXNLTLHLRH-----ANIRESXSTVRI 251
S + + T+ + ++LL+ Y+R + PP K +L + + ++ E + +
Sbjct: 10 SLFKLNDCTAYKNLFETLLSRYNRIAFPPGEKHNNSLKIEFKLRLDQIVDVHEKDQVITL 69
Query: 252 QADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 350
+ L W D RLSWN E+G T + E +W
Sbjct: 70 KGILVHRWHDIRLSWNPQEFGDITLMHFPGEMIW 103
>UniRef50_Q7PJX0 Cluster: ENSANGP00000022703; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000022703 - Anopheles gambiae
str. PEST
Length = 223
Score = 35.1 bits (77), Expect = 2.7
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 228 ESXSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 350
ES + +++ +++ W D+ L WN+ EW G + SE +W
Sbjct: 84 ESDNLLQLGVWMELQWTDEYLRWNSTEWSGIERLAIGSEEIW 125
>UniRef50_Q2XWK6 Cluster: Nicotinic acetylcholine receptor subunit
type G; n=1; Lymnaea stagnalis|Rep: Nicotinic
acetylcholine receptor subunit type G - Lymnaea
stagnalis (Great pond snail)
Length = 618
Score = 35.1 bits (77), Expect = 2.7
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +3
Query: 126 LMIDSLLATYDRDSPP------DSKIVXNLTLHLRHANIRESXSTVRIQADLQMNWIDKR 287
L+++ LLA Y R S P ++ LTL ++ +++ E + I L+ W+D+R
Sbjct: 90 LLMERLLARYHRYSRPVMNASLSVQVKFGLTL-VQISDMDEVNQVLTINVWLEQEWVDER 148
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L+W+ E+ L + E+LW
Sbjct: 149 LTWSPKEYNNLHILRIPCEKLW 170
>UniRef50_Q0GQR6 Cluster: GABA-gated ion channel; n=2; Apis
mellifera|Rep: GABA-gated ion channel - Apis mellifera
(Honeybee)
Length = 463
Score = 35.1 bits (77), Expect = 2.7
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQMNW 275
N +++S ++D+LL YD PD + + +R I E T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 276 IDKRLSWNAGEWGCSTWLVSSERLWEACTW 365
+D+RL++ G+ + + R+W+ T+
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTY 91
>UniRef50_Q93323 Cluster: Putative uncharacterized protein lgc-21;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lgc-21 - Caenorhabditis elegans
Length = 409
Score = 34.7 bits (76), Expect = 3.5
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 207 LRHANIRESXSTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSS-ERLW 350
L+H + E + I L+++W D RL WN W + +V S +W
Sbjct: 69 LQHFELNEHLKDISIHGYLELSWHDDRLMWNQDTWKKNKLVVHSFHHIW 117
>UniRef50_Q17BK7 Cluster: Nicotinic acetylcholine receptor, beta-2
subunit, putative; n=1; Aedes aegypti|Rep: Nicotinic
acetylcholine receptor, beta-2 subunit, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 434
Score = 34.7 bits (76), Expect = 3.5
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +3
Query: 141 LLATYDRDSPP--DSKIVXNLTLHLRHANIRESXSTVRIQADL--QMNWIDKRLSWNAGE 308
L +YD + P D K N+++ + ST + A++ M WID+ L W++ E
Sbjct: 41 LCNSYDANQRPVKDIKFAVNVSVLPVLMSFEYDESTNALNANMLVTMEWIDENLKWDSKE 100
Query: 309 WGCSTWL-VSSERLW 350
+ T + +SS+++W
Sbjct: 101 YNNQTTIAISSDQIW 115
>UniRef50_UPI00015B5C4C Cluster: PREDICTED: similar to GABA-gated
ion channel; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to GABA-gated ion channel - Nasonia vitripennis
Length = 442
Score = 34.3 bits (75), Expect = 4.6
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 ECENATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQ 266
+ N ++S ++D+LL YD P+ V + + +R I E T + +
Sbjct: 43 QSNNHGNISELLDNLLRGYDNSVRPNFGGPPAVVEVDIMVRSMGPISEVDMTYSMDCYFR 102
Query: 267 MNWIDKRLSWNAGEWGCSTWLVSSERLWEACTW 365
+W+D+RL++ +G+ + + R+W+ T+
Sbjct: 103 QSWVDRRLAFQSGKETLALSISMLARIWKPDTY 135
>UniRef50_Q9N4M3 Cluster: Acetylcholine receptor protein 6; n=1;
Caenorhabditis elegans|Rep: Acetylcholine receptor
protein 6 - Caenorhabditis elegans
Length = 562
Score = 34.3 bits (75), Expect = 4.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 219 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 350
++ E + ++ L +W+D RLSWN E+G T + E LW
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLW 88
>UniRef50_Q2XWK8 Cluster: Nicotinic acetylcholine receptor subunit
type E; n=16; Protostomia|Rep: Nicotinic acetylcholine
receptor subunit type E - Lymnaea stagnalis (Great pond
snail)
Length = 538
Score = 34.3 bits (75), Expect = 4.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 180 KIVXNLTLHLRHA-NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 350
K+V + + L +I E + L+ W DK+L+W A E+G L V SE +W
Sbjct: 56 KLVVKMGIRLSQLIDIDEKNQIMTTNVWLRQEWTDKKLTWQASEYGGVDHLYVPSEHIW 114
>UniRef50_A3RK74 Cluster: Fox family transcription factor FoxO1a.1;
n=5; Clupeocephala|Rep: Fox family transcription factor
FoxO1a.1 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 652
Score = 33.9 bits (74), Expect = 6.1
Identities = 26/78 (33%), Positives = 34/78 (43%)
Frame = -1
Query: 398 PGXGSXXX*QSPRAGLPQAFRGHQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGXGLTNV 219
PG GS QS + L QA G+ P ++ L V Q+ D + CLY G G +
Sbjct: 371 PGSGSN---QSSPSSLMQASPGYSPYSSPGLSAVSQQTQQD---FRKCLYGQAGMGSMSP 424
Query: 218 SMSQMQGQVXYDFGVGGG 165
Q + FG GGG
Sbjct: 425 MPMQPLPESKPSFGPGGG 442
>UniRef50_Q4W520 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 397
Score = 33.9 bits (74), Expect = 6.1
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 201 LHLRHAN-IRESXSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWEACTW 365
LH+ H + I++ +++ W+D+RL WN + G T+ + +W W
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWRKKFW 118
>UniRef50_Q22085 Cluster: Putative uncharacterized protein lgc-17;
n=12; Caenorhabditis|Rep: Putative uncharacterized
protein lgc-17 - Caenorhabditis elegans
Length = 401
Score = 33.9 bits (74), Expect = 6.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 195 LTLHLRHANIRESXSTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 350
L +L+ ++E V + +L W D RLSWN+ + T V E++W
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVW 131
>UniRef50_P48182 Cluster: Acetylcholine receptor subunit beta-type
acr-2 precursor; n=3; Rhabditida|Rep: Acetylcholine
receptor subunit beta-type acr-2 precursor -
Caenorhabditis elegans
Length = 575
Score = 33.9 bits (74), Expect = 6.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 219 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLW 350
N+ E ++ L M W D +L+WN E+G S V S+R+W
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVW 143
>UniRef50_Q8TA51 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 428
Score = 33.5 bits (73), Expect = 8.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 222 IRESXSTVRIQADLQMNWIDKRLSWNAGEWGCSTW-LVSSERLW 350
+ E + I L+++W D+RL WN EW L S RLW
Sbjct: 94 MNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLW 137
>UniRef50_Q24352 Cluster: Gamma-aminobutyric acid receptor
alpha-like precursor (GABA(A) receptor alpha-like and
glycine receptor-like subunit of Drosophila); n=3;
Diptera|Rep: Gamma-aminobutyric acid receptor alpha-like
precursor (GABA(A) receptor alpha-like and glycine
receptor-like subunit of Drosophila) - Drosophila
melanogaster (Fruit fly)
Length = 686
Score = 33.5 bits (73), Expect = 8.1
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 ECENATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQ 266
+ N ++S ++D+LL YD PD + + +R I E T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 267 MNWIDKRLSWNAGEWGCSTWLVSSERLWEACTW 365
+W+DKRL++ + + + R+W+ T+
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPDTY 194
>UniRef50_Q23022 Cluster: Acetylcholine receptor subunit alpha-type
unc-38 precursor; n=9; Chromadorea|Rep: Acetylcholine
receptor subunit alpha-type unc-38 precursor -
Caenorhabditis elegans
Length = 511
Score = 33.5 bits (73), Expect = 8.1
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +3
Query: 129 MIDSLLATYDR----DSPPDSKIVXNLTLHLRHA-NIRESXSTVRIQADLQMNWIDKRLS 293
+ D L+ Y+R + P+ + L L L ++ E + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 294 WNAGEW-GCSTWLVSSERLW 350
W+ + G + V E +W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIW 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,952,271
Number of Sequences: 1657284
Number of extensions: 8070033
Number of successful extensions: 25250
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25229
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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