Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K24
(953 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 32 0.022
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 32 0.029
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 31 0.068
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 30 0.090
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 29 0.16
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 29 0.27
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 27 0.63
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 27 1.1
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 27 1.1
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.6
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.6
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 25 3.4
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 24 7.8
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 32.3 bits (70), Expect = 0.022
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 207 LRHANIRESXSTVRIQADLQMNWIDKRLSWNAGEWG 314
+ H I E ST+ + ++ +W D +L+WN +G
Sbjct: 71 ITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASYG 106
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 31.9 bits (69), Expect = 0.029
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIW 118
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 30.7 bits (66), Expect = 0.068
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTL-------HLRHANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 288 LSWNAGEW-GCSTWLVSSERLW 350
L WN ++ G T V SE +W
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIW 106
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 30.3 bits (65), Expect = 0.090
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDS------KIVXNLTLHLRHANIRESXSTVRIQADLQMNWIDKRL 290
++++LLATY+ P + ++ LTL + ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNL 85
Query: 291 SWNAGEWGCSTWL-VSSERLWE 353
WN E+G L ++ +LW+
Sbjct: 86 RWNDSEYGGVRDLRITPNKLWK 107
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 29.5 bits (63), Expect = 0.16
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Frame = +3
Query: 87 ASAAECENATSLSLMIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTV 245
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 246 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 350
+ ++ W D +L W E+G L V S+ +W
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIW 106
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 28.7 bits (61), Expect = 0.27
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTL-------HLRHANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P LT+ L ++R T + ++ W D +
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLW--VKQKWFDYK 90
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W+ E+G L V SE++W
Sbjct: 91 LRWDPEEYGGVEMLYVPSEQIW 112
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 27.5 bits (58), Expect = 0.63
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDS------KIVXNLTLHLRHANIRESXSTVRIQADLQMNWIDKRL 290
++++LLATY+ P + ++ LTL + ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQ-QIIDVDEKNQLLITNIWLSLEWNDYNL 85
Query: 291 SWNAGEWGCSTWL-VSSERLWE 353
WN E+G L ++ +LW+
Sbjct: 86 RWNDSEYGGVRDLRITPNKLWK 107
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 26.6 bits (56), Expect = 1.1
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWE 353
L++ W D + WN+ E+G L + RLW+
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWK 90
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 26.6 bits (56), Expect = 1.1
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWE 353
L++ W D L WN E+G L + R+W+
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWK 122
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.4 bits (53), Expect = 2.6
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP--DSKIVXNLTLHLR-----HANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y++ P ++ V + + L+ N++ T + ++ +W D +
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 88
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W E+G L V S+ +W
Sbjct: 89 LRWEPKEYGGVQMLHVPSDHIW 110
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.4 bits (53), Expect = 2.6
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPP--DSKIVXNLTLHLR-----HANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y++ P ++ V + + L+ N++ T + ++ +W D +
Sbjct: 31 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 88
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W E+G L V S+ +W
Sbjct: 89 LRWEPKEYGGVQMLHVPSDHIW 110
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 25.0 bits (52), Expect = 3.4
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +3
Query: 219 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWG 314
N+ E ++ L++ W D +L W+ ++G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYG 96
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 23.8 bits (49), Expect = 7.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 336 RTPAKCCSPTPLRSNSVV 283
R P CC+PT L SV+
Sbjct: 400 RVPKPCCAPTKLNPISVL 417
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,619
Number of Sequences: 2352
Number of extensions: 8032
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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