Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K24
(953 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 33 0.44
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 33 0.44
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 31 1.8
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 31 1.8
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 31 1.8
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 31 1.8
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 31 1.8
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 31 2.3
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 31 3.1
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 31 3.1
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 29 7.1
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 29 7.1
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 29 7.1
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 33.5 bits (73), Expect = 0.44
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 ECENATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQ 266
+ N ++S ++D+LL YD PD + + +R I E T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 267 MNWIDKRLSWNAGEWGCSTWLVSSERLWEACTW 365
+W+DKRL++ + + + R+W+ T+
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPDTY 194
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 33.5 bits (73), Expect = 0.44
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 ECENATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQ 266
+ N ++S ++D+LL YD PD + + +R I E T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 267 MNWIDKRLSWNAGEWGCSTWLVSSERLWEACTW 365
+W+DKRL++ + + + R+W+ T+
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPDTY 194
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIW 127
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIW 127
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIW 127
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIW 127
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P S ++ L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
W+ E+G T L V SE +W
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIW 127
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 366 STCR--PPTSVPRTPAKCCSPTPLRSNSVVCRSNSFEDLPVF 247
++CR PP P+TP+ C P+P +N+ +C + LP +
Sbjct: 20366 TSCRVLPPPPPPKTPSDPCQPSPCGANA-LCNNGQCSCLPEY 20406
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTL-------HLRHANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 288 LSWNAGEW-GCSTWLVSSERLW 350
L WN ++ G T V SE +W
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIW 107
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTL-------HLRHANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 288 LSWNAGEW-GCSTWLVSSERLW 350
L WN ++ G T V SE +W
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIW 107
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 29.5 bits (63), Expect = 7.1
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 10 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 67
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W E+G L V S+ +W
Sbjct: 68 LKWEPKEYGGVEMLHVPSDHIW 89
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 29.5 bits (63), Expect = 7.1
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W E+G L V S+ +W
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIW 108
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 29.5 bits (63), Expect = 7.1
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +3
Query: 129 MIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTVRIQADLQMNWIDKR 287
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 288 LSWNAGEWGCSTWL-VSSERLW 350
L W E+G L V S+ +W
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIW 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,037,750
Number of Sequences: 53049
Number of extensions: 402895
Number of successful extensions: 1194
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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