Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K23
(889 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 345 9e-94
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 312 6e-84
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 246 6e-64
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 243 5e-63
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 210 4e-53
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 146 5e-34
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 107 4e-22
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 105 2e-21
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 100 4e-20
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 100 4e-20
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 95 2e-18
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 91 3e-17
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 91 3e-17
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 91 5e-17
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 88 2e-16
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 88 3e-16
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 85 3e-15
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 81 4e-14
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 79 1e-13
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 79 1e-13
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 75 2e-12
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 67 6e-10
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 60 7e-08
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 59 2e-07
UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le... 40 0.085
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 37 0.79
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742... 36 1.8
UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000... 34 5.6
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_A2YFM3 Cluster: Putative uncharacterized protein; n=3; ... 33 7.4
UniRef50_Q5K9V0 Cluster: Oxidoreductase, putative; n=2; Filobasi... 33 7.4
UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi... 33 9.7
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ... 33 9.7
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 345 bits (848), Expect = 9e-94
Identities = 157/245 (64%), Positives = 189/245 (77%), Gaps = 1/245 (0%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F P HGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
K+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW+
Sbjct: 66 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKS 125
Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 581
WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+
Sbjct: 126 KKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQV 185
Query: 582 NGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK-VSLLVGXKXXTP*TH 758
NGGT+ +K+ WAR LE+ +PV+ VF QDEMID IGV + K K V+ K TH
Sbjct: 186 NGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTH 245
Query: 759 KGLXK 773
+GL K
Sbjct: 246 RGLRK 250
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 312 bits (767), Expect = 6e-84
Identities = 145/245 (59%), Positives = 179/245 (73%), Gaps = 1/245 (0%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F P HG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE RPG
Sbjct: 6 FSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGL 65
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W+
Sbjct: 66 KISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKS 125
Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 581
W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIMEIQL
Sbjct: 126 KKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQL 185
Query: 582 NGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK-VSLLVGXKXXTP*TH 758
NGGT+ +KV WA+ LEK +PV SVF+Q E+ID I V + + K V+ K TH
Sbjct: 186 NGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTH 245
Query: 759 KGLXK 773
KGL K
Sbjct: 246 KGLRK 250
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 246 bits (602), Expect = 6e-64
Identities = 107/163 (65%), Positives = 127/163 (77%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 530
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 243 bits (594), Expect = 5e-63
Identities = 119/248 (47%), Positives = 159/248 (64%), Gaps = 4/248 (1%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F+HP HG +GF P+KRSR+ RG+ ++FPKDDPS+ HLT+F+ YKAGMTH+VR+ DRPGS
Sbjct: 57 FEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDVDRPGS 116
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
K+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRFYKNW
Sbjct: 117 KVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYKNWKQS 176
Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ---KKAHIME 572
+ GR + + K + ++RV+AHTQ++ L+ + KKAH+ E
Sbjct: 177 AQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKKAHVSE 236
Query: 573 IQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKD-TKVSLLVGXKXXTP 749
IQ+NGGTI K++ A+ LEK + +DSVF Q E D V + T V G
Sbjct: 237 IQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPR 296
Query: 750 *THKGLXK 773
TH+GL K
Sbjct: 297 KTHRGLRK 304
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 210 bits (513), Expect = 4e-53
Identities = 97/183 (53%), Positives = 127/183 (69%)
Frame = +3
Query: 39 NFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 218
NF P HGS+GF P+K S H GKVK FPKDD SKPVHLT F+ +KA MTH++++ DRP
Sbjct: 5 NFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKVDRPE 64
Query: 219 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 398
SK+NKKE+VE V I+ETPPMV +G+VGYIE P GL V+AEH+S ++ FYKNW+
Sbjct: 65 SKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYKNWHS 124
Query: 399 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 578
++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+MEIQ
Sbjct: 125 EKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHLMEIQ 178
Query: 579 LNG 587
+ G
Sbjct: 179 VMG 181
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 146 bits (355), Expect = 5e-34
Identities = 88/210 (41%), Positives = 120/210 (57%)
Frame = +3
Query: 84 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 263
K S +H+GKV FPKD SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 264 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 443
ET P + VG VG ET GL+ +V+A+H+S +C+R K Y W+
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117
Query: 444 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARX 623
G ++ TQM LL QKKAH+ E Q+N G + K+ WA
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155
Query: 624 HLEKPIPVDSVFAQDEMIDCIGVPRAKDTK 713
LE+ +PV+ +F + IG + K K
Sbjct: 156 KLEQQVPVNHIFRVRRLF-VIGTTKGKHYK 184
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 107 bits (257), Expect = 4e-22
Identities = 71/224 (31%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Frame = +3
Query: 39 NFQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 218
N P GS+ F P+KR++R +++++P++D V L AF YKAGM+H + D P
Sbjct: 4 NINRPRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPK 60
Query: 219 SKINKKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 392
S +E+ +TI+E PP+ VC + V G E + L L VWA+++ ++ R+
Sbjct: 61 SPNAGQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI---- 115
Query: 393 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIME 572
+ RK++E D + + VRV+ HT KL +KK I+E
Sbjct: 116 -------------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILE 161
Query: 573 IQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
I++ G IE+++ +A+ L K + + VF + E++D IGV + K
Sbjct: 162 IRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGK 205
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 105 bits (252), Expect = 2e-21
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 7/225 (3%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GSMGF P+KR+ R G++ ++P+ + S+ + + F G+KAGMTHV+ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 404
+EI +AVT++E PPM + V GY TP+G++ +WA+ S + RF
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 405 XXXXXXXXXXWQDELGRK--SIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 569
+ + + D + ++ VR+I TQ L+K K IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185
Query: 570 EIQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
E+ L GG K++WA L I +D V+ + +D +G+ + K
Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGK 230
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 100 bits (240), Expect = 4e-20
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GSMGF P+KR+ R G+VK++P+ D S V + F G+KAGMTHV+ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 410
E+ +AVT++E PPM + V GY TP+G + WA S D +
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122
Query: 411 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM-KLLKQRQKKAHIMEIQLNG 587
D+L + + VR+I +Q K+ K IME+ L G
Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171
Query: 588 GTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPR 698
G + ++ WA L + + ++ VF ID IGV +
Sbjct: 172 GDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTK 208
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 100 bits (240), Expect = 4e-20
Identities = 79/222 (35%), Positives = 115/222 (51%), Gaps = 4/222 (1%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS+GF P+KR+ R +VK +P+ D KPV L AF+GY+AGMTHV DRPG +
Sbjct: 9 PRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTS 67
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRRFYKNWYXXX 404
KEI VTI+ETPPM V Y P+ G +L WA+ E + +RR
Sbjct: 68 GKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI-------- 119
Query: 405 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLL-KQRQKKAHIMEIQL 581
+ + KS+E+ K VR+IA +Q KL +KK ++EI++
Sbjct: 120 -----STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKKPDLLEIKV 170
Query: 582 NGGTIEDKV-KWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
G + K+ +A+ L I V+ VF + +++D I V + K
Sbjct: 171 GGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGK 212
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 95.5 bits (227), Expect = 2e-18
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS+GF P+KR++ +++++PK+ V + F GYKAGMTH++ D PG N
Sbjct: 7 PRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG-LTN 62
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK----- 386
KEI VTIIETPP+ G+ Y GL V D + R K
Sbjct: 63 GKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKPKPKM 122
Query: 387 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKA 560
+Y + E+ + + + + MI+ + VR I TQ ++K + KK
Sbjct: 123 TFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK-KKP 180
Query: 561 HIMEIQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK 713
+ME + G ++E+K + + L K + V V + E++D I V + K T+
Sbjct: 181 EVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQ 231
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 91.1 bits (216), Expect = 3e-17
Identities = 66/218 (30%), Positives = 102/218 (46%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS +YP+KR+R +V+ +P++ F GYK GM HV+ S
Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 410
+E A T+IE PP+ V V Y +TP+G + L VWA+ + +D R F
Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112
Query: 411 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 590
+D+ + K +++ S VRV+A TQ +L +KK ++EI + GG
Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165
Query: 591 TIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
E + A L K + + VF + + ID I V + K
Sbjct: 166 PPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGK 203
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 91.1 bits (216), Expect = 3e-17
Identities = 62/218 (28%), Positives = 100/218 (45%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS+ F P+KR+ R +++++P ++ V + F GYKAGMTH + D P S
Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 410
+EI VTI++ PPM + Y TP G R + WAE E R +
Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123
Query: 411 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 590
+EL + I ++ +RVI TQ K +KK +ME ++ G
Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173
Query: 591 TIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
+ ++ ++A L + I VF + E++D + + K
Sbjct: 174 DVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGK 211
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 90.6 bits (215), Expect = 5e-17
Identities = 72/224 (32%), Positives = 101/224 (45%), Gaps = 3/224 (1%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GSMGF P+KR+ + ++P DD V L F GYKAGMTHVV D+ +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 410
E VT++ETPPM V Y +TP+G + L VWA+ E R
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL---------- 114
Query: 411 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 587
DEL IE + I + +RVI HT +K +ME ++ G
Sbjct: 115 -SVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166
Query: 588 GTIEDKVKWARXHLEK--PIPVDSVFAQDEMIDCIGVPRAKDTK 713
GT+ D++++A +E VF E D G+ + K T+
Sbjct: 167 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQ 210
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 88.2 bits (209), Expect = 2e-16
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 41/262 (15%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVHLTAFI 167
+ P HGS+G P+KR+ + +++++P K KPV L ++
Sbjct: 6 YSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV-LLGYV 64
Query: 168 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRALLTVW 344
YKAGM+H + DRP + + KEI VT+++ PP++ +G+ GY I HGL + VW
Sbjct: 65 AYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLSFGEVW 124
Query: 345 ---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRKSIEKD 473
E + E + + N + E G K +E +
Sbjct: 125 RSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFKFLENN 184
Query: 474 FKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARXHLEKP 638
+K+ + +RVIA T L +KK I+EI++ GGT+ +++ +A L
Sbjct: 185 WKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEKLLGNY 244
Query: 639 IPVDSVFAQDEMIDCIGVPRAK 704
+ VD VF + + ID IGV + K
Sbjct: 245 VTVDQVFREGQFIDIIGVTKGK 266
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 87.8 bits (208), Expect = 3e-16
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS G P+KRS + +P+ + P L F+GYK GMTHV D P S N
Sbjct: 9 PRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPNSPTN 67
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRRFYK-NWYX 398
KEI VT++E PP++ + + Y G ++T W+ + D RR + + +
Sbjct: 68 GKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHSISSFL 127
Query: 399 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKA-HIMEI 575
+ +L I+ + +++ + R++ TQ + + KKA ++EI
Sbjct: 128 KDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGKKAPDLVEI 181
Query: 576 QLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
Q+ GG + ++ +A L K I + VF + ++ID +GV + K
Sbjct: 182 QIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGK 224
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 84.6 bits (200), Expect = 3e-15
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS G P+KR+ +V+++P D KP+ AF+GYK GMTHV+ DR
Sbjct: 9 PRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMIDDREHVDTA 65
Query: 231 KKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW-------AEHMSEDCRRRFY 383
+EI VT+IETPPMV +G V GY + G AL VW E + E+ R++
Sbjct: 66 GQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVWRNPSDTIKEKLGEEVLRKYL 124
Query: 384 --KNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKK 557
+ ++ ++ K ++ D +K++ ++ I + K K
Sbjct: 125 LGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVVGVGLIMSSIPFLAGGVSK---KA 181
Query: 558 AHIMEIQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
I+E+++ G +E +++A+ L + + V+ V + +D IGV + K
Sbjct: 182 PDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGK 229
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 81.0 bits (191), Expect = 4e-14
Identities = 47/122 (38%), Positives = 64/122 (52%)
Frame = -3
Query: 695 GDTNAVNHFILGKHRIDRDRFLQMXSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVG 516
GD+N +NHFIL ++R++R+ F ++ GP +FV DGTTV LDF V V
Sbjct: 54 GDSNDINHFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVS 113
Query: 515 NDSYNTTVADHLLEIFFY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDS 336
DS N +V + F F + F F E LL F+PV VE++S F + PDS
Sbjct: 114 QDSDNRSVLLDSGQFSFNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDS 171
Query: 335 QQ 330
Q
Sbjct: 172 GQ 173
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 79.4 bits (187), Expect = 1e-13
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGSK 224
P GS+G+ P+ R+R + K++ + + D P + F+G+KAGM+H+V DRP S
Sbjct: 7 PRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHSA 62
Query: 225 INKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE-DCRRRFYKNWYXX 401
EI VTI+E P M G+ Y ++P+G + + W + + KN Y
Sbjct: 63 TEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKNGYK- 121
Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 581
DE K E K ++ V+ V +++ + +K +ME ++
Sbjct: 122 ------------TDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIP--KKVPELMENRI 167
Query: 582 NGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK 713
GG + + ++A+ + K + + VFA E++D + + T+
Sbjct: 168 AGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQ 211
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 79.0 bits (186), Expect = 1e-13
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GS+ + P+ R++ +++A+PK D +P + A G+KAG +V DR
Sbjct: 9 PRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSIDDREKVPNA 67
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-YKNWYXXXX 407
K++V T++ TPP++ +G+ GY + GL A V+AE + + + KN
Sbjct: 68 GKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISLKN------ 121
Query: 408 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNG 587
+ E + EK KK+ ++V I+ + L QKK +I E ++G
Sbjct: 122 ----------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPYIFEASVSG 167
Query: 588 GTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
G I + + L K I +D +F +D + + K
Sbjct: 168 GDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGK 206
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 74.9 bits (176), Expect = 2e-12
Identities = 54/218 (24%), Positives = 102/218 (46%)
Frame = +3
Query: 51 PXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 230
P GSMGF+P+KR+ R ++K +PK + KP+ AF YK GMTH + IN
Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNIN 58
Query: 231 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 410
+ + VT++E P ++ +G Y + L+ + +++ + + R+ K
Sbjct: 59 GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110
Query: 411 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 590
++++ ++ F V++I TQ +K + K I +I + G
Sbjct: 111 ---LKNYNFEEK------KEQFLSKADNADEVKIIVSTQPWKIKLK-KTPEIFDIPIGGS 160
Query: 591 TIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
+ K+++A L K + ++ VF + + +D I V + K
Sbjct: 161 DVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGK 198
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 66.9 bits (156), Expect = 6e-10
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Frame = +3
Query: 48 HPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 227
H GSM +YP+ R++ +++++P + S PV + F G+K GMTHV R S
Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63
Query: 228 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXX 407
+ I VT+IE PP+ +G+ Y E G + V E +++ + +K
Sbjct: 64 AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEG---NMVVVYEKWTQNLDKELFKK------ 114
Query: 408 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNG 587
E+ K + + Y V ++A + KK I E+++ G
Sbjct: 115 -------ITTFKEVKEKPVPE------TYADVRLIVATRNKDVPGIPSKKPEIFELRIGG 161
Query: 588 G-TIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAK 704
G +++++ ++A HL K I + + +D + V + K
Sbjct: 162 GNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGK 201
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 60.1 bits (139), Expect = 7e-08
Identities = 34/100 (34%), Positives = 52/100 (52%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F+HP GS+GF PKKRS R K + + +++ F K THV+R + S
Sbjct: 6 FEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRICNIVSS 65
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 341
K + I++ VT++E PP+ VG+ Y + L L T+
Sbjct: 66 KSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105
Score = 40.3 bits (90), Expect = 0.064
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +3
Query: 483 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK-WARXHLEKPIPVDSVF 659
+I++ + R + T +K +KK + E + GG+ + K++ W + + K I ++S+F
Sbjct: 136 IIKHSVIFRFLCCTFIKTNSMIKKK-YFFETDIIGGSPKMKLEFWLKLN-NKKIYINSIF 193
Query: 660 AQDEMIDCIGVPRAKDTK-VSLLVGXKXXTP*THKGLXK--CL-XWT 788
++++ID IG+ + TK V G TH+GL K C+ WT
Sbjct: 194 HENDIIDAIGITKGHGTKGVVSRWGITRLPRKTHRGLRKVACIGPWT 240
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/108 (28%), Positives = 56/108 (51%)
Frame = +3
Query: 42 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
F P GS+ + P+ R+R +++ +P+ +P L A G+KAG +V DR +
Sbjct: 6 FSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSIDDREHT 63
Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 365
K++V T++ TPP+ +G+ GY + +G V+AE + +
Sbjct: 64 PNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111
>UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1;
Mus musculus|Rep: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus
musculus (Mouse)
Length = 109
Score = 39.9 bits (89), Expect = 0.085
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 99 HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 236
HR + K FPK+D K HL F+ +A MT+ V E +R G K +K
Sbjct: 8 HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53
>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 253
Score = 36.7 bits (81), Expect = 0.79
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 447 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARXH 626
L RKSIE + + IR+ +V I +K++++++ + E +L GT + + A
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194
Query: 627 LEKPIPVDSVFAQDEMI 677
EKPI ++ + ++ I
Sbjct: 195 KEKPISLEEILDPEDRI 211
>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
OJ1742_G01.32; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
Length = 100
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 233 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWTTRSVD 337
E DRG CHH+ S GLCR C + P+ T V+
Sbjct: 36 EGDRGCCHHYLTGSPGLCRRCPLRAHPAATGFEVE 70
>UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1205
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 84 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 257
K +++ K+K +++ K + AFI A ++ +R DR ++N I + T
Sbjct: 19 KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78
Query: 258 IIETPPMVCVGVVG 299
+ETPP V + VVG
Sbjct: 79 AVETPPYV-IAVVG 91
>UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to
ENSANGP00000006197; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000006197 - Nasonia
vitripennis
Length = 1307
Score = 33.9 bits (74), Expect = 5.6
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2
Query: 411 PSSCICTSFCRSDVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSEESR 262
PS+ I T SD++ L P QS+ V+ +GS+ HR K SEE R
Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886
>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 135
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 435 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 590
WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G
Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79
>UniRef50_A2YFM3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 310
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 2 FSLRLSSSMSHRKFSAPRSWVYGILSQKE 88
FSL L+ S S+R+F P+SWV+G+ + ++
Sbjct: 165 FSLGLNLSTSNRQFVPPKSWVFGMAAMRK 193
>UniRef50_Q5K9V0 Cluster: Oxidoreductase, putative; n=2;
Filobasidiella neoformans|Rep: Oxidoreductase, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 490
Score = 33.5 bits (73), Expect = 7.4
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = -1
Query: 784 QXRHFXRPLXVYGVXXLXP-TRSDTFVSFALGTPMQSIISSWANTESTGIGFSRCXLAHF 608
+ RH ++G L P TR+ +V + P+ +I + + T + + +
Sbjct: 262 EPRHLKESARLFGSDLLEPFTRTQWWVVPMIWWPIAGLIGWLSMLQFTDSSITAKSILTY 321
Query: 607 TLSSMVPPLSWISIM*AFFCRCFNSFI*VWAMTLTTLQ*RIIFLKSFSIDLRPSSSCHFL 428
L S +P S+ ++ +F CF + +W + ++ + L + D R + + HF+
Sbjct: 322 PLPSSIPVPSFAAL--GYFSLCFAFGVFIWTILEYSMHRFLFHLDYYLPDTRWAITLHFM 379
Query: 427 L 425
L
Sbjct: 380 L 380
>UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis
invicta virus 1|Rep: Structural polyprotein - Solenopsis
invicta virus 1
Length = 1137
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 278 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 129
HRR + ++ D+ LVD T++ VG GLITD +S ++ A V
Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524
>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
Arabidopsis thaliana|Rep: Putative F-box protein
At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
Length = 518
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 652 ESTGIGFSRCXLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 527
E TG+ S+C +H +S + PL W+SI+ F + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,705,977
Number of Sequences: 1657284
Number of extensions: 17221237
Number of successful extensions: 39965
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 38373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39926
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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