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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_K23
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   300   1e-81
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   297   7e-81
01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847...    31   1.2  
11_01_0710 - 5830475-5830595,5831498-5834124                           30   2.8  
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    29   3.7  
05_04_0324 - 20273797-20274261                                         29   4.9  
04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748...    28   8.6  
01_05_0125 - 18382402-18382761,18382863-18383036                       28   8.6  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  300 bits (736), Expect = 1e-81
 Identities = 141/246 (57%), Positives = 180/246 (73%), Gaps = 2/246 (0%)
 Frame = +3

Query: 42  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
           F+HP HGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGMTH+VRE ++PGS
Sbjct: 6   FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGS 65

Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
           K++KKE  EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYKNW   
Sbjct: 66  KLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKS 125

Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAHIMEIQ 578
                      +  + G+K I+   +KM +Y S+VRVIAHTQ++ +K  +QKKAH+MEIQ
Sbjct: 126 KKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQ 185

Query: 579 LNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK-VSLLVGXKXXTP*T 755
           +NGGTI DKV +     EK IPVD+VF +DEMID IGV + K  + V    G       T
Sbjct: 186 INGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245

Query: 756 HKGLXK 773
           H+GL K
Sbjct: 246 HRGLRK 251


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  297 bits (729), Expect = 7e-81
 Identities = 140/246 (56%), Positives = 179/246 (72%), Gaps = 2/246 (0%)
 Frame = +3

Query: 42  FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 221
           F+HP HGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGMTH+VRE ++PGS
Sbjct: 6   FEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGS 65

Query: 222 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 401
           K++KKE  EAVTIIETPP+V VG+V Y++TP GLR+L +VWA+H+SE+ RRRFYKNW   
Sbjct: 66  KLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKS 125

Query: 402 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAHIMEIQ 578
                      +  + G+K I+   +KM +Y SVVRVI HTQ++ +K  +QKKAH+MEIQ
Sbjct: 126 KKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQ 185

Query: 579 LNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMIDCIGVPRAKDTK-VSLLVGXKXXTP*T 755
           +NGGTI DKV +     EK IPVD+VF +DEMID IGV + K  + V    G       T
Sbjct: 186 INGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245

Query: 756 HKGLXK 773
           H+GL K
Sbjct: 246 HRGLRK 251


>01_06_0083 +
           26283492-26283756,26284255-26284467,26284620-26284771,
           26284884-26285157,26285277-26285485
          Length = 370

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 461 NRKRFQEDDPLL*CCKSHCPHSNEAVKTATKEGSHYGNP 577
           N +RF  +DPLL CC  H P+   A  T  +  + +G+P
Sbjct: 297 NPRRFGINDPLLACCGGHGPYHTGA--TCDRTATVWGDP 333


>11_01_0710 - 5830475-5830595,5831498-5834124
          Length = 915

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 682 QSIISSWANTESTGIGFSRCXLAHFTLSSMVPPLSWISIM 563
           +S+ISSW  +  TG   S C + +  +     PLS  S++
Sbjct: 650 ESVISSWGGSVHTGTSSSSCSVTNLVVKFCTLPLSQWSLL 689


>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 534  LLKQRQKKAHIMEIQLNGGTIEDKVKWARXHLEKPIPVDSVFAQDEMI 677
            L  Q  K+  ++E +++  ++ D+V      L KP PV   F  DE++
Sbjct: 2664 LTSQHGKRIAVIENEVHDFSMPDRVNAINPGLAKPGPVIETFCSDELV 2711


>05_04_0324 - 20273797-20274261
          Length = 154

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 120 FPKDDPSKPVHLTAFIGYKAGMTHVVRE--PDRPGSKINKKEIVEAVTIIETPPMVCVGV 293
           FP D+P K VH+    G  + +T ++ E  P +    +N     EA   +  P   CVGV
Sbjct: 60  FPPDNPQKFVHVHRVFG-ASNVTKLLNELHPYQREDAVNSL-AYEADMRLRDPVYGCVGV 117

Query: 294 VGYIETPHGLRAL 332
           +  ++  H LR L
Sbjct: 118 ISVLQ--HQLRQL 128


>04_04_1477 +
           33873976-33874080,33874433-33874544,33874777-33874874,
           33875548-33876261,33876348-33876518,33876955-33877011,
           33877096-33878718
          Length = 959

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +3

Query: 561 HIMEIQLNGGTIEDKVKWARXHLEKPIPVDS 653
           H++E + N  ++++K+K    H E  +P+DS
Sbjct: 460 HLLEDRENNESVDEKIKGDAQHEENTLPLDS 490


>01_05_0125 - 18382402-18382761,18382863-18383036
          Length = 177

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 375 DVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSE 271
           ++ +L    PPR ST R+V E   C+ + R + +E
Sbjct: 47  ELGALLPNLPPRASTTRIVEEAIACVGELRARTAE 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,100,594
Number of Sequences: 37544
Number of extensions: 494736
Number of successful extensions: 1071
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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