Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K22
(918 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 6e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 3e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 44 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 41 1e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 40 3e-05
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.0
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.4 bits (120), Expect = 6e-09
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Frame = +2
Query: 137 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 304
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 305 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 475
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 476 KRLDISTPISMQLDNXPNDMXNLXVQ 553
RL I M L+N P D +Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 113 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 271
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 272 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 445
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 446 VSNNGSVSW 472
+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +2
Query: 158 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 322
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 323 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 475
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +2
Query: 158 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 322
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 323 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 475
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 2e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 289
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 290 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 463
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 464 VSW 472
V W
Sbjct: 137 VEW 139
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.6 bits (108), Expect = 2e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +2
Query: 101 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 259
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 260 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 436
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 437 ----RARVSNNGSVSW 472
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.8 bits (106), Expect = 3e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +2
Query: 158 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 322
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 323 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 472
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 4e-07
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Frame = +2
Query: 92 LFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESE 265
++ L+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVN 69
Query: 266 STVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYA 433
+I+ ++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y
Sbjct: 70 LKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYE 126
Query: 434 L----RARVSNNGSVSWIKRLDISTPISMQLDNXPNDMXNLXVQL 556
+ +A V +G V W + S+ ++ P D+ ++L
Sbjct: 127 VTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 4e-07
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Frame = +2
Query: 92 LFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESE 265
++ L+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 VWFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVN 69
Query: 266 STVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDY 430
+I+ ++ +W D +L W E+G L V S+ +WRPD+VL NA
Sbjct: 70 LKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTL 129
Query: 431 ALRARVSNNGSVSW 472
A +A + + G V W
Sbjct: 130 ATKATIYHQGLVEW 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 131 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 295
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 296 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 397
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 248 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 421
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 422 GDYALRARVSNNGSVSWI 475
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +2
Query: 89 YLFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 253
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 254 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 427
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 428 YALRARVSNNGSVSWI 475
Y V NNG+ ++
Sbjct: 124 YPTNVVVKNNGTCLYV 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Frame = +2
Query: 212 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 388
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 389 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNXPND 532
+L N A + VS+ G V W+ + + ++ P D
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.6 bits (98), Expect = 3e-06
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Frame = +2
Query: 146 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 310
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 311 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 481
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 482 LDISTPISMQLDNXPND 532
L I M+L N P D
Sbjct: 156 LTIKAKCPMELRNFPMD 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 209 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 382
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 383 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 475
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.1 bits (92), Expect = 1e-05
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Frame = +2
Query: 137 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 304
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 305 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 457
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 458 GSVSWIKRLDISTPISMQLDNXPNDMXNLXVQLRXY 565
GS++ RL I+ M L P D +++ +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 159
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.9 bits (89), Expect = 3e-05
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Frame = +2
Query: 137 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 304
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 305 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 457
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 458 GSVSWIKRLDISTPISMQLDNXPNDMXNLXVQLRXY 565
GS++ RL I+ M L P D +++ +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESF 159
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 154 GQ*CCVFAFCRTSYSTSEEKQVTR 83
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 355 PSAAAPFPCVPTQS 314
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,644
Number of Sequences: 438
Number of extensions: 5465
Number of successful extensions: 58
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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