Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K17
(902 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 302 7e-81
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 300 3e-80
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 288 1e-76
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 287 3e-76
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 215 1e-54
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 211 2e-53
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 205 1e-51
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 205 1e-51
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 203 6e-51
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 203 6e-51
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 202 7e-51
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 202 1e-50
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 202 1e-50
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 197 3e-49
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 196 6e-49
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 192 1e-47
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 165 1e-39
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 161 2e-38
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 154 3e-36
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 151 2e-35
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 150 4e-35
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 146 9e-34
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 144 3e-33
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 144 3e-33
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 144 4e-33
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 143 5e-33
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 143 6e-33
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 142 1e-32
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 142 1e-32
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 141 2e-32
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 141 2e-32
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 141 3e-32
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 140 3e-32
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 140 4e-32
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 139 1e-31
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 139 1e-31
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 138 1e-31
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 138 2e-31
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 138 2e-31
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 138 2e-31
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 137 4e-31
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 136 5e-31
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 136 7e-31
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 136 1e-30
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 135 1e-30
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 135 1e-30
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 134 4e-30
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 133 5e-30
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 133 7e-30
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 133 7e-30
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 132 9e-30
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 132 2e-29
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 131 2e-29
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 131 2e-29
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 131 2e-29
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 131 3e-29
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 130 4e-29
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 130 4e-29
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 130 5e-29
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 130 5e-29
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 130 5e-29
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 130 5e-29
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 130 6e-29
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 130 6e-29
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 129 8e-29
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 129 8e-29
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 129 1e-28
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 129 1e-28
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 129 1e-28
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 129 1e-28
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 128 1e-28
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 128 1e-28
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 128 2e-28
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 128 2e-28
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 128 3e-28
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 128 3e-28
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 128 3e-28
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 128 3e-28
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 128 3e-28
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 127 3e-28
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 127 3e-28
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 127 4e-28
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 127 4e-28
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 126 6e-28
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 126 6e-28
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 126 6e-28
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 126 6e-28
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 126 8e-28
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 126 8e-28
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 126 8e-28
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 126 1e-27
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 1e-27
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 126 1e-27
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 126 1e-27
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 125 1e-27
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 125 1e-27
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 125 1e-27
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 125 1e-27
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 125 2e-27
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 125 2e-27
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 124 2e-27
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 124 2e-27
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 124 3e-27
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 124 3e-27
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 124 3e-27
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 124 4e-27
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 124 4e-27
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 123 5e-27
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 123 5e-27
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 123 5e-27
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 123 5e-27
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 123 5e-27
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 123 5e-27
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 123 7e-27
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 123 7e-27
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 123 7e-27
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 123 7e-27
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 123 7e-27
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 123 7e-27
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 123 7e-27
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 122 1e-26
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 122 1e-26
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 122 1e-26
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 122 2e-26
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 122 2e-26
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 122 2e-26
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 122 2e-26
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 122 2e-26
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 121 2e-26
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 121 2e-26
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 121 2e-26
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 121 2e-26
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 121 3e-26
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 121 3e-26
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 121 3e-26
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 121 3e-26
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 120 4e-26
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 120 4e-26
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 120 4e-26
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 120 4e-26
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 120 4e-26
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 120 4e-26
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 120 4e-26
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 120 4e-26
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 120 5e-26
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 120 5e-26
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 120 7e-26
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 120 7e-26
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 120 7e-26
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 119 9e-26
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 119 9e-26
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 119 9e-26
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 119 9e-26
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 119 1e-25
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 119 1e-25
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 119 1e-25
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 119 1e-25
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 119 1e-25
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 118 2e-25
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 118 2e-25
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 118 2e-25
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 118 2e-25
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 118 2e-25
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 118 2e-25
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 118 2e-25
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 118 2e-25
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 118 3e-25
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 118 3e-25
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 118 3e-25
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 118 3e-25
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 117 4e-25
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 117 4e-25
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 117 4e-25
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 117 4e-25
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 117 5e-25
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 117 5e-25
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 117 5e-25
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 116 6e-25
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 116 6e-25
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 116 6e-25
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 116 8e-25
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 116 8e-25
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 116 8e-25
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 116 1e-24
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 116 1e-24
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 116 1e-24
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 116 1e-24
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 116 1e-24
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 116 1e-24
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 115 1e-24
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 115 1e-24
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 115 1e-24
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 115 1e-24
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 115 1e-24
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 115 1e-24
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 115 2e-24
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 115 2e-24
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 115 2e-24
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 114 3e-24
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 114 3e-24
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 114 3e-24
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 114 3e-24
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 114 3e-24
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 114 3e-24
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 114 3e-24
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 114 3e-24
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 114 3e-24
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 113 4e-24
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 113 4e-24
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 113 6e-24
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 113 6e-24
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 113 6e-24
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 113 8e-24
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 113 8e-24
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 113 8e-24
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 112 1e-23
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 112 1e-23
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 112 1e-23
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 112 1e-23
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 112 1e-23
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 111 2e-23
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 111 2e-23
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 111 2e-23
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 111 2e-23
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 111 2e-23
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 111 2e-23
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 111 2e-23
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 111 2e-23
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 111 2e-23
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 111 2e-23
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 111 2e-23
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 111 2e-23
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 111 3e-23
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 111 3e-23
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 111 3e-23
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 110 4e-23
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 110 4e-23
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 110 4e-23
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 110 4e-23
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 110 4e-23
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 110 4e-23
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 110 4e-23
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 110 5e-23
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 110 5e-23
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 110 5e-23
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 110 5e-23
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 110 5e-23
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 110 5e-23
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 109 7e-23
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 109 7e-23
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 109 7e-23
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 109 7e-23
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 109 9e-23
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 109 9e-23
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 109 9e-23
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 109 1e-22
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 109 1e-22
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 109 1e-22
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 109 1e-22
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 109 1e-22
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 109 1e-22
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 109 1e-22
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 109 1e-22
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 109 1e-22
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 109 1e-22
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 2e-22
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 108 2e-22
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 108 2e-22
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 108 2e-22
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 108 2e-22
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 108 2e-22
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 2e-22
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 108 2e-22
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 108 2e-22
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 108 2e-22
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 108 2e-22
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 108 2e-22
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 108 2e-22
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 108 2e-22
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 107 3e-22
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 107 3e-22
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 107 3e-22
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 107 3e-22
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 107 4e-22
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 107 4e-22
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 107 4e-22
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 107 4e-22
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 107 5e-22
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 107 5e-22
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 107 5e-22
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 107 5e-22
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 106 7e-22
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 106 7e-22
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 106 7e-22
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 106 7e-22
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 106 9e-22
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 106 9e-22
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 106 9e-22
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 106 9e-22
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 105 1e-21
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 105 1e-21
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 105 1e-21
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 105 1e-21
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 105 2e-21
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 105 2e-21
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 105 2e-21
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 105 2e-21
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 105 2e-21
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 105 2e-21
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 105 2e-21
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 105 2e-21
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 105 2e-21
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 105 2e-21
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 104 3e-21
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 104 3e-21
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 104 3e-21
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 104 3e-21
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 104 3e-21
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 104 3e-21
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 104 3e-21
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 104 3e-21
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 104 4e-21
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 104 4e-21
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 104 4e-21
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 104 4e-21
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 104 4e-21
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 104 4e-21
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 104 4e-21
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 104 4e-21
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 103 5e-21
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 103 5e-21
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 103 5e-21
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 103 5e-21
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 103 5e-21
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 103 5e-21
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 103 5e-21
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 103 6e-21
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 103 6e-21
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 103 6e-21
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 103 6e-21
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 103 6e-21
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 103 6e-21
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 103 6e-21
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 103 6e-21
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 103 6e-21
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 103 8e-21
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 103 8e-21
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 103 8e-21
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 103 8e-21
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 103 8e-21
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 103 8e-21
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 102 1e-20
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 102 1e-20
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 102 1e-20
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 102 1e-20
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 102 1e-20
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 102 1e-20
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 102 1e-20
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 102 1e-20
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 102 1e-20
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 102 1e-20
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 101 2e-20
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 101 2e-20
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 101 2e-20
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 101 2e-20
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 101 2e-20
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 101 2e-20
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 101 2e-20
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 101 3e-20
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 101 3e-20
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 101 3e-20
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 101 3e-20
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 101 3e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 101 3e-20
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 101 3e-20
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 101 3e-20
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 101 3e-20
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 101 3e-20
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 101 3e-20
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 101 3e-20
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 101 3e-20
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 101 3e-20
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 101 3e-20
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 101 3e-20
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 101 3e-20
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 101 3e-20
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 101 3e-20
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 101 3e-20
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 101 3e-20
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 101 3e-20
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 101 3e-20
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 100 4e-20
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 100 4e-20
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 100 4e-20
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 100 4e-20
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 100 4e-20
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 100 6e-20
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 100 6e-20
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 100 6e-20
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 100 6e-20
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 100 6e-20
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 100 6e-20
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 100 6e-20
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 100 6e-20
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 100 6e-20
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 99 8e-20
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 99 8e-20
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 99 8e-20
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 99 8e-20
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 100 1e-19
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 100 1e-19
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 100 1e-19
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 99 1e-19
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 99 1e-19
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 99 1e-19
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 99 1e-19
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 99 1e-19
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 99 2e-19
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 99 2e-19
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 99 2e-19
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 99 2e-19
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 99 2e-19
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 2e-19
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 98 2e-19
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 98 2e-19
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 98 2e-19
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 98 2e-19
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 98 2e-19
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 98 3e-19
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 98 3e-19
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 98 3e-19
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 98 3e-19
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 98 3e-19
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 97 4e-19
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 97 4e-19
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 97 5e-19
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 97 5e-19
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 97 5e-19
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 97 7e-19
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 97 7e-19
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 97 7e-19
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 97 7e-19
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 97 7e-19
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 97 7e-19
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 96 9e-19
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 96 9e-19
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 96 9e-19
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 96 9e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 96 9e-19
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 96 1e-18
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 96 1e-18
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 96 1e-18
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 96 1e-18
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 96 1e-18
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 96 1e-18
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 95 2e-18
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 95 2e-18
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 95 2e-18
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 95 2e-18
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 95 2e-18
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 95 2e-18
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 95 2e-18
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 95 2e-18
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 95 3e-18
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 95 3e-18
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 95 3e-18
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 95 3e-18
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 95 3e-18
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 94 4e-18
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 94 4e-18
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 94 4e-18
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 94 4e-18
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 94 5e-18
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 94 5e-18
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 94 5e-18
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 5e-18
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 94 5e-18
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 94 5e-18
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 83 6e-18
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 93 7e-18
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 93 7e-18
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 93 7e-18
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 93 7e-18
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 93 7e-18
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 83 8e-18
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 93 9e-18
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 93 9e-18
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 93 9e-18
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 302 bits (742), Expect = 7e-81
Identities = 154/244 (63%), Positives = 183/244 (75%), Gaps = 3/244 (1%)
Frame = +1
Query: 25 FEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXX 204
FEE YD A+FYNMNLSRPL+KA+ S+NFV+PTPIQAATIP+AL+G+D+
Sbjct: 144 FEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTG 203
Query: 205 XXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXX 384
YMLP LERLLY+ G +TRVLVLVPTRELG QV+ VT+QL+QF
Sbjct: 204 KTAAYMLPTLERLLYRPLDG-AVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGG 262
Query: 385 XDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMK 564
DVK QESVLR+NPDIVIATPGRLIDH+ NTP+F L +IEVL+LDEADRMLDEYFAEQMK
Sbjct: 263 LDVKVQESVLRKNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMK 322
Query: 565 EIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE---AGVREDT 735
I+RQC+ RQT+LFSATM+EEVKDLAAVSL KPVK+FV+SN L +R++
Sbjct: 323 HIVRQCARTRQTILFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNLRQEFIRIRKER 382
Query: 736 QGXR 747
+G R
Sbjct: 383 EGDR 386
Score = 33.5 bits (73), Expect = 7.5
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 695 EVAFNLRQEFVRIXKXRECTR 757
+VAFNLRQEF+RI K RE R
Sbjct: 366 DVAFNLRQEFIRIRKEREGDR 386
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 300 bits (737), Expect = 3e-80
Identities = 153/237 (64%), Positives = 175/237 (73%), Gaps = 3/237 (1%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
++ SFY MNLSRPLM+AIG L +++PTPIQA+TIP+ALLG+D+ YML
Sbjct: 154 EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYML 213
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P LERLLY+ ITRVLVLVPTRELGAQV+ VT+QL QF DVK QE
Sbjct: 214 PTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQE 273
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+VLRQNPDIVIATPGRLIDHI+NTPSF L SIEVL+LDEADRMLDEYFAEQMKEII C
Sbjct: 274 AVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCC 333
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE---AGVREDTQGXR 747
RQTMLFSATMSE+VKDLAAVSL KP+K+FVN+N L +RED +G R
Sbjct: 334 KTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKEGDR 390
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 288 bits (707), Expect = 1e-76
Identities = 142/226 (62%), Positives = 170/226 (75%)
Frame = +1
Query: 13 DSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
+S F E+ YDE+ +F +MNLSRPL+KAI +++F PTPIQ A IP+ LLGKD+
Sbjct: 167 NSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAA 226
Query: 193 XXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXX 372
+MLP+LERL+YK + +TRVLVLVPTRELG QVHAVTRQLAQF
Sbjct: 227 TGTGKTAAFMLPVLERLIYKPREAP-VTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCL 285
Query: 373 XXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 552
DVK QE+ LR PD++IATPGRLIDH+ N PSF L+ IEVL+LDEADRMLDEYF
Sbjct: 286 AVGGLDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFE 345
Query: 553 EQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
EQMKEIIR CS +RQT+LFSATMSEEVKDLA+VSL+ PV++FVNSN
Sbjct: 346 EQMKEIIRLCSHQRQTLLFSATMSEEVKDLASVSLRNPVRIFVNSN 391
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 287 bits (704), Expect = 3e-76
Identities = 144/223 (64%), Positives = 166/223 (74%)
Frame = +1
Query: 22 FFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXX 201
FFE+ YDEN SF +MNLSRPL+KAI ++ F PTPIQ A IP+ LLGKD+
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGT 266
Query: 202 XXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXX 381
+ LP+LERL+YK + +TRVLVLVPTRELG QVH+VTRQLAQF
Sbjct: 267 GKTAAFALPVLERLIYKPRQAP-VTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVG 325
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
DVK QE+ LR PDI+IATPGRLIDH+ N PSF L SIEVL+LDEADRMLDEYF EQM
Sbjct: 326 GLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQM 385
Query: 562 KEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
KEIIR CS RQTMLFSATM++EVKDLA+VSLK PV++FVNSN
Sbjct: 386 KEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSN 428
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 215 bits (526), Expect = 1e-54
Identities = 118/244 (48%), Positives = 151/244 (61%), Gaps = 24/244 (9%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N SF MNLSR ++KA + PTPIQ A IP+AL GKD+ ++LPI
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
LER++Y+ KG TRVLVLVPTREL QV V R+L+ F D+K QE+
Sbjct: 207 LERMIYRPKGAS-CTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIE------------------------VLVLD 519
LR PD+V+ATPGRLIDH+ N+PSF L +IE VLVLD
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLD 325
Query: 520 EADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGG 699
EADRML+E F +QM E+IR C+ RQT+LFSATM+EE+ +LA++SL+KPVK+F+N N
Sbjct: 326 EADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENTDT 385
Query: 700 GLQL 711
L+L
Sbjct: 386 ALKL 389
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 211 bits (516), Expect = 2e-53
Identities = 104/212 (49%), Positives = 145/212 (68%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++SF +MNLSRP++K + +L F PT IQ TIP+ALLGKD+ +++PI
Sbjct: 258 HSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPI 317
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
LERLLY+ K TRVL+L PTREL Q H+V ++A F +K QE
Sbjct: 318 LERLLYRPKKVPT-TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQE 376
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
LR+ PDIVIATPGR IDH+RN+ F + +IE++V+DEADRML++ FA+++ EII+ C
Sbjct: 377 LRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKS 436
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
RQTMLFSATM+++V DL +SL +PV++FV++
Sbjct: 437 RQTMLFSATMTDKVDDLIRLSLNRPVRVFVDN 468
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 205 bits (501), Expect = 1e-51
Identities = 105/218 (48%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D +SF +LSRP+++A+ SL+F PTPIQ+ TIPIAL GKD+ +M+
Sbjct: 330 DAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMI 389
Query: 226 PILERLLYKAKGG---DRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
P +ERL ++AK + +RVL+L PTREL Q ++V + +A+F VK
Sbjct: 390 PTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVK 449
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
QE+ L+ P++VIATPGRLIDH+RN+ SF L IE+LV+DEADRML++ FA+++ EI++
Sbjct: 450 SQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVK 509
Query: 577 QCSPK--RQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
C PK RQTMLFSATM+++V+ L +SLK+PV+LFV+
Sbjct: 510 SC-PKGARQTMLFSATMTDDVEQLVRLSLKRPVRLFVD 546
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 205 bits (500), Expect = 1e-51
Identities = 116/248 (46%), Positives = 153/248 (61%), Gaps = 8/248 (3%)
Frame = +1
Query: 13 DSDFFEEPPPYDEN--ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXX 186
D+ F +P D +SF MNLSRPL++A+ SL F PTPIQA IP+ALLG+D+
Sbjct: 206 DAFFSSDPTTTDPTLPSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGS 265
Query: 187 XXXXXXXXXXYMLPILERLLYKAKG-GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXX 363
+M+PILERL Y+ +G G RVLVL PTREL Q AV + LA+
Sbjct: 266 AVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLD 325
Query: 364 XXXXXXXXDVKY--QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 537
+ Q LR PDI+IATPGRLIDH+ NTPSF L +++VLV+DEADRML
Sbjct: 326 VRFALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRML 385
Query: 538 DEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN--SNXGGGLQL 711
+ F ++++EII+ C RQTMLFSATM++ V +L +SL KP+++FV+ N GL
Sbjct: 386 EAGFTDELEEIIKACPRSRQTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTARGLTQ 445
Query: 712 E-AGVRED 732
E +R D
Sbjct: 446 EFVRIRSD 453
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 203 bits (495), Expect = 6e-51
Identities = 101/206 (49%), Positives = 134/206 (65%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++LSRPL +A +L + PTPIQAA IPIA+ G+DV +MLP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
R+L++ T VLVLVPTREL QVH +T LAQF Q + LR
Sbjct: 209 RMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALR 268
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
P+IV+ATPGR+IDH+RNT SFGL + L+LDEADR+L+ F E++KEI+RQC KRQ
Sbjct: 269 TRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQCPKKRQ 328
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
T+LFSAT++ V+ LA++S+K P +L
Sbjct: 329 TLLFSATLTAGVEALASLSMKNPARL 354
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 203 bits (495), Expect = 6e-51
Identities = 103/211 (48%), Positives = 147/211 (69%), Gaps = 2/211 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F +++LSRP++K + SL +V P+PIQ+ATIPIALLGKD+ +M+PI+E
Sbjct: 232 NFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIE 291
Query: 238 RLLYK-AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESV 411
RLLYK AK TRV+VL+PTREL QV V +Q+A+F +++ QE +
Sbjct: 292 RLLYKPAKIAS--TRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQM 349
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L+ PDIVIATPGR IDHIRN+ SF + S+E+LV+DEADRML+E F +++ EI+
Sbjct: 350 LKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSN 409
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
RQ +LFSATM+ ++K L ++SLKKPV++ ++
Sbjct: 410 RQNLLFSATMNSKIKSLVSLSLKKPVRIMID 440
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 202 bits (494), Expect = 7e-51
Identities = 104/219 (47%), Positives = 139/219 (63%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
+P E +SF M+LSRP+++ + S+ F PTPIQA TIPI+L+GKDV
Sbjct: 285 QPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKT 344
Query: 211 XXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
+++PILERLLY+ K TRV++L PTREL Q HAV +LA
Sbjct: 345 AAFVVPILERLLYRPKKVPT-TRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLS 403
Query: 391 VKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI 570
+K QE+ LR PD+VIATPGR IDH+RN+ SF + +IE+LVLDEADRML++ FA+++ EI
Sbjct: 404 LKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEI 463
Query: 571 IRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+ RQTMLFSATM+ V L L KPV++ +S
Sbjct: 464 LTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADS 502
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 202 bits (493), Expect = 1e-50
Identities = 102/206 (49%), Positives = 137/206 (66%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F +NLSRPL++A +L + PTPIQAA IP+AL G+D+ + LP LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RLL++ K TRVL+L PTREL Q+H++ + LAQF V+ QE VLR
Sbjct: 228 RLLFRPKRVFA-TRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
PDIV+ATPGR+IDH+RN+ S L + VL+LDEADR+L FA ++ E++R C +RQ
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQ 346
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
TMLFSATM+EEVK+L +SL KP++L
Sbjct: 347 TMLFSATMTEEVKELVKLSLNKPLRL 372
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 202 bits (493), Expect = 1e-50
Identities = 103/211 (48%), Positives = 136/211 (64%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
+SF M+LSRP+++ + S+ F PTPIQA TIPIAL+GKDV +++PIL
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
ERLLY+ K TRV+VL PTREL Q H+V +LA +K QE L
Sbjct: 336 ERLLYRPKKVPT-TRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R PD+VIATPGR IDH+RN+ SF + ++E+LVLDEADRML++ FA+++ EI+ R
Sbjct: 395 RLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSR 454
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
QTMLFSATM+ V L V L KP ++ V+S
Sbjct: 455 QTMLFSATMTSTVDKLIRVGLNKPARIMVDS 485
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 197 bits (481), Expect = 3e-49
Identities = 99/214 (46%), Positives = 139/214 (64%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E +F ++LSRPL+KA+ L F PTPIQA IP+AL GKD+ ++L
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+LERLL++ R RVL+L+PTREL Q +V LAQF K QE
Sbjct: 247 PVLERLLFR-DSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
LR++PD+VIATPGRLIDH+ N GL +E+L+LDEADR+LD F +++ +I+ C
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
RQTMLFSAT+++EVK LA +SL++P+++ V++
Sbjct: 366 TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDA 399
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 196 bits (478), Expect = 6e-49
Identities = 95/218 (43%), Positives = 142/218 (65%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF NLSRP+++ + ++NF +PTPIQ TIP+ALLGKD+ +++PILE
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 850
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RLL++ + +RV +L+PTREL Q + V +LA + ++ QE+VL+
Sbjct: 851 RLLFRPRKVPT-SRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLK 909
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ PD++IATPGR IDH+RN+ SF + ++E+LVLDEADRML++ FA+++ EI+ RQ
Sbjct: 910 KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQ 969
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQL 711
TMLFSATM++ V L V L +PV+L V++ + L
Sbjct: 970 TMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTL 1007
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 192 bits (468), Expect = 1e-47
Identities = 95/210 (45%), Positives = 137/210 (65%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF +LSRP+++ + S+ F PTPIQ TIP+ALLGKDV +++PILE
Sbjct: 306 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILE 365
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RLLY+ + +RV +L+PTREL Q + V +LA F ++ QE++L+
Sbjct: 366 RLLYRPRKVPT-SRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILK 424
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ PD++IATPGR IDH+RN+ SF + ++E+LVLDEADRML++ FA+++ EI+ RQ
Sbjct: 425 KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQ 484
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
TMLFSATM+ V L V L +PV+L V++
Sbjct: 485 TMLFSATMTNNVDKLIRVGLSRPVRLMVDA 514
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 165 bits (401), Expect = 1e-39
Identities = 89/222 (40%), Positives = 135/222 (60%), Gaps = 2/222 (0%)
Frame = +1
Query: 16 SDFFE-EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
+DFF+ E P ++ SF + LS +++A+ +NF PTP+Q TIPIAL G+DV
Sbjct: 2 TDFFDTETPLPNDVESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAV 61
Query: 193 XXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXX 372
+++P +ERLL ++K + TR ++L PTREL AQ ++V Q+ QF
Sbjct: 62 TGSGKTAAFLIPTVERLL-RSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALL 120
Query: 373 XXXXX-DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYF 549
+VK +E L + PD ++ TPGR+IDHI+N F L ++ VLVLDE+DR+L E F
Sbjct: 121 LTGGSSNVKEEEERLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGF 180
Query: 550 AEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
Q++E+ + Q++L +ATM+ V LA +SLKKPV++
Sbjct: 181 YSQIEEVHKSLPETTQSILVTATMNSSVSRLAEMSLKKPVRI 222
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 161 bits (392), Expect = 2e-38
Identities = 88/210 (41%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
S+ ++LSR L +A+ L + PT +Q IPI L G+D + +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 238 RLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
R++ + G D T L+L PTREL AQ AV ++LA F D Q + L
Sbjct: 62 RMILR--GRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQL 119
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R PDI++ATPGRLID +RNT +F L +IEVLVLDE D+MLD F +++KEI C R
Sbjct: 120 RTEPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVAR 179
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
QT+LFSATM +EV + ++L+KP+++ ++
Sbjct: 180 QTLLFSATMEKEVLSFSLLALQKPLQVQID 209
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 154 bits (374), Expect = 3e-36
Identities = 75/209 (35%), Positives = 130/209 (62%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
++ ++ L +PL+KA+ + + PT IQ+ IP AL GKD+ +++PIL+
Sbjct: 191 TWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQ 250
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+ Y++ + ++ L++ PTREL Q++ V +L ++ ++ QE+ LR
Sbjct: 251 KF-YRSPFTN-YSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELR 308
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
NP+++IATPGRLIDH++N+ S L ++EVL+ DEAD++LD F + I+ C+ +RQ
Sbjct: 309 GNPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIVENCNRERQ 368
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
T+LFSAT++ EV L ++L+KP+++ N
Sbjct: 369 TLLFSATLTSEVNKLIDIALRKPIRIQAN 397
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 151 bits (366), Expect = 2e-35
Identities = 88/216 (40%), Positives = 123/216 (56%), Gaps = 13/216 (6%)
Frame = +1
Query: 67 NMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLL 246
++ LSRPL+KA+ LNFV T IQ IP+AL G+D+ ++LP LERLL
Sbjct: 34 SLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALERLL 93
Query: 247 YKAK------------GGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX- 387
GG T+VLVL+P+REL Q V L ++
Sbjct: 94 RSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTGGM 153
Query: 388 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
+++ QE +L+ P IVIATPGR++D + NT S L +E+++LDEADR+LD F ++ E
Sbjct: 154 NIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQECLE 213
Query: 568 IIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
I++ S RQTMLFSAT+S V DLA ++L P K+
Sbjct: 214 ILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKV 249
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 150 bits (364), Expect = 4e-35
Identities = 82/210 (39%), Positives = 119/210 (56%), Gaps = 1/210 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F L L+KA+ L FV PTP+QAA IP+AL G+D+ ++LP+L R
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L+ KG R L+L+PTREL Q + +QF D K Q ++LR+
Sbjct: 244 LV-DLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRK 302
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
PD++I TPGRL++ + N + L ++V++LDEADRMLD FAE M+ + ++C + QT
Sbjct: 303 VPDVLIGTPGRLLEQL-NAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCKECENREQT 361
Query: 601 MLFSATM-SEEVKDLAAVSLKKPVKLFVNS 687
+LFSAT ++D+ LK P L +NS
Sbjct: 362 LLFSATTGGAALRDIIGKVLKDPEHLMLNS 391
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 146 bits (353), Expect = 9e-34
Identities = 88/208 (42%), Positives = 113/208 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++LS + A+ F HPTPIQA IP AL GKDV ++LP+++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL K G TR LVL PTREL Q+ + + Q LR
Sbjct: 65 RLA--GKPG---TRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALR 119
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
Q +IVIATPGRL+DH+ + L IE LVLDEADRMLD F Q+ I+R+ +RQ
Sbjct: 120 QKREIVIATPGRLVDHLEQGNA-RLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
T+LFSATM+ EV D A L+ PV++ V
Sbjct: 179 TLLFSATMAGEVADFARAHLRDPVRVEV 206
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 144 bits (349), Expect = 3e-33
Identities = 79/214 (36%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Frame = +1
Query: 46 DEN-ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
DEN +F ++N+++P++ A+ + HPTPIQA IP AL G+D+ ++
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 223 LPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQ-FXXXXXXXXXXXXDVKY 399
+P+L+RL +A D++T+ L+L PTREL QVH R ++
Sbjct: 100 IPVLDRLS-RATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNG 158
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q + L++ +++ATPGRL+DHI N L S+E+LVLDEADRMLD FA+ + +I+R
Sbjct: 159 QITALKKGVQVIVATPGRLLDHI-NAGRVDLSSLEILVLDEADRMLDMGFADDISDILRA 217
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT++ SAT V +AA K P ++ +
Sbjct: 218 APIDRQTIMCSATWDGPVGKIAASFTKNPERVSI 251
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 144 bits (349), Expect = 3e-33
Identities = 75/218 (34%), Positives = 128/218 (58%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ F+ + L++ L+KA + HPT +QA IPI + GKDV ++LPI
Sbjct: 115 DTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPI 174
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++R + + ++ L+++PTREL Q + +L ++ ++ QE+
Sbjct: 175 MQR--FGNLKNLQYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETE 232
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
LR+ PDI+IATPGR +D + N+ S + +IE+LV DEADR+++ F +++++I++ S
Sbjct: 233 LRKYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKD 292
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGL 705
RQT+L SAT++ VK L+ ++L P+K VN + GGL
Sbjct: 293 RQTVLISATLNATVKQLSLLALNNPIK--VNVDFVGGL 328
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 144 bits (348), Expect = 4e-33
Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 3/212 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE- 237
+ ++NLS + KA+ + T IQA +IP+ L+GKD+ +++PI+E
Sbjct: 83 YKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEI 142
Query: 238 --RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++ ++ + G T +++ PTREL Q V ++ K +E
Sbjct: 143 LNKIHFQTRNG---TGAIIISPTRELAIQTFDVLEKILAHSERTRTLIIGGSSKKKEEEA 199
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L++ IV+ATPGRL+DHI NT F +++ LV+DEADR+++ F E+M++I+ +
Sbjct: 200 LKKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKN 259
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
RQTMLFSAT SE+V D+A +SLK+PV + V S
Sbjct: 260 RQTMLFSATQSEKVDDIANISLKQPVVINVES 291
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 143 bits (347), Expect = 5e-33
Identities = 78/206 (37%), Positives = 116/206 (56%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF +L L++A+ + FV+PTPIQ +P AL G+D+ ++LP+L
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLH 116
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RLL + + R LV+ PTREL AQ+H + LA+F + Q LR
Sbjct: 117 RLLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQLR 176
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
DIV+A PGRL+DH+R + L +++LVLDEAD M D F ++EI+ ++Q
Sbjct: 177 TGVDIVLACPGRLLDHVRRGHA-DLSHVDMLVLDEADMMFDMGFLSDVREILHCTRVRKQ 235
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
TMLFSATM +++LA L++PV++
Sbjct: 236 TMLFSATMPAPLRELAEECLRQPVRI 261
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 143 bits (346), Expect = 6e-33
Identities = 87/233 (37%), Positives = 126/233 (54%), Gaps = 3/233 (1%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F +M LS P+ K I + PTPIQ TIP+ L GKDV ++LP
Sbjct: 94 KSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLP 153
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+ ERL K R L+L PTREL Q T++L +F ++ Q +
Sbjct: 154 MFERL--KTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFA 211
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L +NPDI+IATPGRL+ H+ S L S+E +V DEADR+ + FAEQ++EII +
Sbjct: 212 ALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPG 270
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAG---VREDTQ 738
QT+LFSAT+ + + + A L +PV + ++ + QL+ VREDT+
Sbjct: 271 GHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTK 323
>UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 15 - Plasmodium
falciparum
Length = 717
Score = 142 bits (344), Expect = 1e-32
Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 9/217 (4%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D N + ++ +SRP +K + F +PT IQ IP+AL GK + ++L
Sbjct: 84 DMNCLWSDLYISRPFLKVLYEQKFSNPTYIQRDVIPLALEGKSILANSETGSGKTLAFVL 143
Query: 226 PILERLLYKA---------KGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXX 378
PILERLL KG IT+ L+L+PTREL Q + V R L ++
Sbjct: 144 PILERLLQSVNIKMRRNNMKGSYNITKALILLPTRELSLQCYDVIRSLTKYVTITYSLFC 203
Query: 379 XXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQ 558
D+K QE ++ DI + TPGR++D + N+ S ++ +E++V DEAD++L+ F E+
Sbjct: 204 GGIDIKQQEYEFKKRNDIFVCTPGRILDLLLNSSSDFINYLEIVVFDEADKLLELGFKEE 263
Query: 559 MKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
+I+ C K+Q + FSAT++ ++K LA SLK PV
Sbjct: 264 CLKILDVCKFKKQILFFSATLTSDIKQLANFSLKNPV 300
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 142 bits (343), Expect = 1e-32
Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 1/212 (0%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N +F +++LS K+I + F T IQA IP ++G+DV +++P
Sbjct: 153 NKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA 212
Query: 232 LERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+E LLY+ K R T VLV+ PTREL Q + V ++L ++ K +
Sbjct: 213 VE-LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAE 271
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
+L + ++++ATPGRL+DH+ NT F +++ LV+DEADR+L++ F E +K+I+
Sbjct: 272 ILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPK 331
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
RQT LFSAT S +V+DLA VSL PV + V+
Sbjct: 332 TRQTSLFSATQSAKVEDLARVSLTSPVYIDVD 363
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 141 bits (342), Expect = 2e-32
Identities = 82/223 (36%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F +M LS P+ K + + PTPIQ TIP+ L GKDV +++P
Sbjct: 35 KSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIP 94
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+ ERL KA R L+L PTREL Q T++L +F + Q +
Sbjct: 95 MFERL--KAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFA 152
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L +NPDI+I TPGRL+ H+ + L ++E +V DEADR+ + FAEQ++EIIR+
Sbjct: 153 ALHENPDIIIGTPGRLM-HVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPE 211
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPV--KLFVNSNXGGGLQL 711
RQT+LFSAT+ + + + A L +PV +L V+S ++L
Sbjct: 212 TRQTLLFSATLPKVIVEFARAGLTEPVLIRLDVDSKLSDQIKL 254
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 141 bits (342), Expect = 2e-32
Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 1/209 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + L+ P+ +A+ N+V PTPIQA TIP AL G+DV + LPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 238 RLL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
RLL ++ K + TRVLVL PTREL Q+ + + Q L
Sbjct: 77 RLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSL 136
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
Q ++++ATPGRL+D +++ L S+E LVLDEADRMLD F +++I+ + KR
Sbjct: 137 MQGVEVLVATPGRLLDLVQSN-GLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKR 195
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
QT+ FSATM +++ +LA L+ P ++ V
Sbjct: 196 QTLFFSATMPKDIAELADSMLRDPARVAV 224
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 141 bits (341), Expect = 3e-32
Identities = 80/205 (39%), Positives = 110/205 (53%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L L++ + ++ +V PTP+Q IP+ L G+D+ + LP+L R
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L GG R VLVL PTRELGAQV R +F Q S LR
Sbjct: 63 LGGHRPGGPR---VLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRA 119
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
DIVIAT GRL+D I+ L S+EVL+LDE DRMLD F +K I+ C +RQT
Sbjct: 120 GTDIVIATVGRLMDFIKEK-EIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQT 178
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKL 675
+ FSAT+ E++D+A +L+ P ++
Sbjct: 179 LFFSATIPPEIEDVARFALQNPERI 203
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 140 bits (340), Expect = 3e-32
Identities = 78/210 (37%), Positives = 125/210 (59%), Gaps = 2/210 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS+P +KAI + F T +QA TIP L G+DV +++P +E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE- 102
Query: 241 LLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL+ K R T ++V+ PTREL Q+ V R+L +F + + + L
Sbjct: 103 LLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLM 162
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKR 594
+ +++IATPGRL+DH++NT F +++ L++DEADR+L+ F ++M++II+ + R
Sbjct: 163 KGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDR 222
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
Q+MLFSAT + +V+DLA +SL +P LF+N
Sbjct: 223 QSMLFSATQTTKVEDLARISL-RPGPLFIN 251
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 140 bits (339), Expect = 4e-32
Identities = 81/218 (37%), Positives = 128/218 (58%), Gaps = 12/218 (5%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ ++ ++ LSR L+KA+ + + P+ IQ+ IP+AL GKD+ +++P
Sbjct: 124 DTNWSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSGKSAAFLIPT 183
Query: 232 LERLL----YKAK-------GGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXX 375
L+RL+ K K G R+ T+ L+L+PTREL AQ + V L Q
Sbjct: 184 LQRLITAGVIKQKDVDLTRGGNQRVGTKALILLPTRELAAQCYDVFLALTQNLTQNGVLI 243
Query: 376 XXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAE 555
VK QE+ LR+ P IV ATPG+++D + N+ + +IE++VLDEADR+LD F +
Sbjct: 244 TGGVPVKEQEAKLRRMPYIVFATPGKVLDIMLNSNCIHMDAIEIVVLDEADRLLDLGFKD 303
Query: 556 QMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
++ I++ C+ +RQTMLFSAT++E K+L V+L P+
Sbjct: 304 ELAHILQLCNKERQTMLFSATLTEATKELVPVALVNPI 341
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 139 bits (336), Expect = 1e-31
Identities = 80/209 (38%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+A+F L+ ++KAI + PTPIQA IP+ L G+DV + LPI
Sbjct: 10 DATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPI 69
Query: 232 LERLLYKAKGGD----RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
++RLL +A R L+L PTREL QV A A+ D+
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q + LR+ +I+IATPGRL+DH++ + L +++LVLDEADRMLD F ++ I+
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQKTA-NLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKP 666
+RQT+LFSAT S E+K LA+ L+ P
Sbjct: 189 LPKERQTLLFSATFSPEIKKLASTYLRNP 217
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 139 bits (336), Expect = 1e-31
Identities = 80/208 (38%), Positives = 112/208 (53%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +++L L+KA+ L F PTPIQA IP A+ G+DV ++LPIL +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L+ + +G TR LV+ PTREL AQ+ LA ++ QE R+
Sbjct: 63 LIDRPRG---TTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRR 119
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
D++I TPGRL+DH R P L +E LVLDEADRMLD F ++ I++ +RQT
Sbjct: 120 GVDVLIGTPGRLLDHFR-APYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQT 178
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+ FSATM + LA L+ P + +N
Sbjct: 179 LFFSATMPAPIGVLAREMLRNPATVNIN 206
>UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2;
Theileria|Rep: DEAD-box family helicase, putative -
Theileria annulata
Length = 570
Score = 138 bits (335), Expect = 1e-31
Identities = 79/225 (35%), Positives = 130/225 (57%), Gaps = 14/225 (6%)
Frame = +1
Query: 52 NASFYNMNLSRPLMK---AIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
N ++ + L R +M+ AI + + +PT IQ+ IP+AL GKD+ ++
Sbjct: 74 NLNWSDFGLCRSIMRVGIAISEMGYQNPTIIQSKVIPLALEGKDLLIMMIQGSGKTASFL 133
Query: 223 LPILERL--------LYKAKGGDRI---TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXX 369
+P L+RL L K K T+ LV++PTREL AQ V + L+++
Sbjct: 134 IPTLQRLVVSGVLKQLTKEKQAYNTRFGTKALVILPTRELAAQCFQVFKSLSKYLSSKAI 193
Query: 370 XXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYF 549
+K QE+ LRQ P+ +I TPGR +D + N+ S + +IEV+++DEAD++L+ F
Sbjct: 194 LLTGGIPIKEQENRLRQFPETIICTPGRALDMLINSSSINVENIEVVIMDEADKLLELGF 253
Query: 550 AEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
++ ++++ C+ RQTMLFSAT++EE K+L ++SL PV + V+
Sbjct: 254 RDECLQVLKYCNRNRQTMLFSATLTEETKELVSLSLVNPVYVKVD 298
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 138 bits (334), Expect = 2e-31
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
Frame = +1
Query: 43 YDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
Y ++ F +M LS P++K I + PTPIQ TIP+AL G+D+ ++
Sbjct: 32 YKKSGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFL 91
Query: 223 LPILERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+P+ E+L + +AK G R L+L PTREL Q ++L +F +++
Sbjct: 92 IPLFEKLKIRQAKVG---ARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMEN 148
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q S + NPDI+IATPGR + HI L++IE +V DEADR+ + F EQ+ EII +
Sbjct: 149 QFSAIHGNPDILIATPGRFL-HICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINR 207
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
RQT+LFSAT+ + + D A + L PV L
Sbjct: 208 LPESRQTLLFSATLPKLLVDFAKIGLNDPVLL 239
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 138 bits (334), Expect = 2e-31
Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 2/210 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + + L+ +I L F T +Q A IP+ L G D+ Y LPIL+R
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQR 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+L + + R R ++L PTREL QVHA + L ++QE +LR+
Sbjct: 63 MLKQRRFEHRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLLRK 122
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKRQ 597
NP+++IATPGRL+DHIR S L +E LVLDEADRMLD F + + I + KRQ
Sbjct: 123 NPEVLIATPGRLLDHIRE-KSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAPNVKRQ 181
Query: 598 TMLFSATMSE-EVKDLAAVSLKKPVKLFVN 684
TMLFSAT+ +V ++ L+ P ++ +N
Sbjct: 182 TMLFSATLEHVDVANICNQVLRAPERIEIN 211
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 138 bits (333), Expect = 2e-31
Identities = 81/210 (38%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS P+ KA+ + P+PIQA IP L GKDV + LP+LE
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 238 RLLY--KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
L KAK G R LVL PTREL AQV ++ + Q
Sbjct: 62 LLSKGNKAKAGQ--IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
LR D+++ATPGRL+D + + + +EVLVLDEADRMLD F +K+I+ K
Sbjct: 120 LRHGVDVLVATPGRLLD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAK 178
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQ ++FSAT S+E+++LA + +PV++ V
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNQPVEISV 208
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 137 bits (331), Expect = 4e-31
Identities = 77/210 (36%), Positives = 117/210 (55%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+FY+M L L++ I F PTPIQ +IPIA+ G D+ + +PIL
Sbjct: 5 NFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILN 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
R++ K +G + LVL PTREL QV L++ ++ Q LR
Sbjct: 65 RVI-KGEG----LQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLR 119
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+NP+I++ TPGRL+DH+ N + L ++ +VLDEAD MLD F +++I+ QC +RQ
Sbjct: 120 RNPEIIVGTPGRLMDHM-NRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
T LFSAT+ +EV++L +K+P + + S
Sbjct: 179 TFLFSATLPDEVRELGTKFMKQPEIILIES 208
>UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4;
Plasmodium|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 737
Score = 136 bits (330), Expect = 5e-31
Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 8/216 (3%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D N + ++ +SRP +K + F +PT IQ IP+AL GK + ++L
Sbjct: 101 DRNTLWSDLYISRPFLKVLYEGKFNNPTFIQRDVIPLALEGKSILANSETGSGKTLAFVL 160
Query: 226 PILERLLYKAKGGDR--------ITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXX 381
PILERLL+ R +T+ L+L+PTREL Q + V + + ++
Sbjct: 161 PILERLLHSPNIKMRSYNPRSVCVTKSLILLPTRELALQCYDVVKSMTKYVSITYSLFCG 220
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
DVK QE ++ DI I TPGR++D + N+ S ++ +EV+V DEAD++L+ F E+
Sbjct: 221 GIDVKQQEYEYKKKKDIFICTPGRILDLLLNSSSDFINYLEVVVFDEADKLLELGFKEEC 280
Query: 562 KEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
+++ C K+Q + FSAT++ ++K+LA SLK P+
Sbjct: 281 LKVLDVCKFKKQILFFSATLTRDIKELANFSLKNPI 316
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 136 bits (329), Expect = 7e-31
Identities = 82/211 (38%), Positives = 115/211 (54%), Gaps = 3/211 (1%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS P+ KA+ + P+PIQA IP L GKDV + LP+LE
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 238 RLLY--KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
L KAK G R LVL PTREL AQV ++ + Q
Sbjct: 62 LLSKGNKAKAGQ--IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 412 LRQNPDIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
LR D+++ATPGRL+D + +N F + +E+LVLDEADRMLD F +K+I+
Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNVVKF--NQLEILVLDEADRMLDMGFIRDIKKILALLPA 177
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
KRQ ++FSAT S+E+++LA + +PV++ V
Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNQPVEISV 208
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 136 bits (328), Expect = 1e-30
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Frame = +1
Query: 49 ENASFYNMN--LSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
E+ SF ++ +S +K + L F H T IQ TI L G+DV ++
Sbjct: 57 EDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFL 116
Query: 223 LPILERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+P +E L+YK K R T V++L PTREL Q + V ++L +
Sbjct: 117 IPCIE-LIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVHTYGLIMGGSNRSA 175
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
+ L +I++ATPGRL+DH++NTP F +++ L++DEADR+L+ F E++K+II+
Sbjct: 176 EAQKLANGINILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKL 235
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKK 663
+RQTMLFSAT + V+DLA +SLKK
Sbjct: 236 LPKRRQTMLFSATQTRRVEDLARISLKK 263
>UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 642
Score = 135 bits (327), Expect = 1e-30
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 1/212 (0%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N F ++ + +P A+ + F + T IQ+ TIP L G+DV +++P
Sbjct: 150 NDLFDDLEVCKPTKDALKQMKFTNMTHIQSRTIPHLLKGRDVLGAAKTGSGKTLAFLIPA 209
Query: 232 LERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+E +LYK + T ++V+ PTREL Q++ V +QL F + K +
Sbjct: 210 IE-MLYKTNFVQSMGTGIIVITPTRELATQIYDVAKQLMFFHSKTLGLLIGGANRKAEAI 268
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L+ +++IATPGRL+DH++NT F H++ L++DEAD +L F E++ EI++
Sbjct: 269 KLKTGVNMIIATPGRLLDHLQNTAGFAYHNLLGLIIDEADAILRIGFQEELTEILKLLPI 328
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
RQT+LFSAT ++++ DLA +SLK+P+ + V+
Sbjct: 329 DRQTVLFSATQNKKIDDLARLSLKQPIYIGVD 360
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 135 bits (327), Expect = 1e-30
Identities = 76/213 (35%), Positives = 112/213 (52%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L + L KA+ L F PT +Q TIP L GKD+ ++LP+L +
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L + TR L+L+PTREL Q Q A + K+Q + +R+
Sbjct: 63 FLNDPRPNTS-TRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRK 121
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
NP++++ATPGRL++HI+N + +E LVLDE+DRMLD F E M I C+ +RQ
Sbjct: 122 NPEVLVATPGRLVEHIKN-GNVDFSDLEFLVLDESDRMLDMGFQENMLAIAAVCNEERQN 180
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGG 699
+LFSAT+ + L+ PV++ V+S G
Sbjct: 181 LLFSATLKHKGIGGITGLLQDPVRIQVDSAKEG 213
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 134 bits (325), Expect = 2e-30
Identities = 79/215 (36%), Positives = 113/215 (52%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
E PP D +F + L+ L A+ + + PTPIQA +P L G+DV
Sbjct: 127 EIPPQD--TAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKT 184
Query: 211 XXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
+ LPIL +L +R R LVL PTREL QV ++ +++
Sbjct: 185 AAFALPILHKL----GAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVG 240
Query: 391 VKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI 570
Q L++ D+V ATPGRL+DHI + L +E+LVLDE DRMLD F +K I
Sbjct: 241 YGKQREDLQRGVDVVAATPGRLLDHIEQG-TMTLADVEILVLDEVDRMLDMGFLPDVKRI 299
Query: 571 IRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
++QC RQT+ FSAT+ E+ LA+ +L+ PV++
Sbjct: 300 VQQCPQARQTLFFSATLPPELAQLASWALRDPVEI 334
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 134 bits (325), Expect = 2e-30
Identities = 80/219 (36%), Positives = 109/219 (49%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + LS P++KAI + P+ IQA IP L G+DV + LP+LE
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L R LVL PTREL AQV + Q + Q LR
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DI+IATPGR++D + N + +EVLVLDEADRMLD F +K+I+ KRQ
Sbjct: 126 RGADILIATPGRMMD-LYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQ 184
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
+LFSAT S E++ LA + P+++ V + +E
Sbjct: 185 NLLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVSVE 223
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 134 bits (323), Expect = 4e-30
Identities = 76/216 (35%), Positives = 115/216 (53%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXX 213
P D+ F ++ LS P+ +AI + ++HPTPIQA IP+ L+G+DV
Sbjct: 216 PEEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTA 275
Query: 214 XYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
+ LP+++ +L + R+ R L+L PTREL QV + Q+ +
Sbjct: 276 SFTLPMMD-ILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESM 334
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q VL + D++IATPGRLID + + L +LV+DEADRMLD F ++ I+
Sbjct: 335 NDQRDVLSKGVDVLIATPGRLID-LFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIV 393
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+ FSATM+ E++ LA L+ P ++ V
Sbjct: 394 SLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITV 429
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 133 bits (322), Expect = 5e-30
Identities = 76/211 (36%), Positives = 113/211 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS +K + + PT IQ TI + L GKD+ +++PILE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL K LV+ PTREL Q+ R++ + D+K++ + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRMD 171
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
Q +IVI TPGR++ H+ P F ++E+LVLDEADR LD F + M I+ KRQ
Sbjct: 172 QC-NIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPAKRQ 230
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
T+LFSAT ++ V+DLA +SLK P + V+ +
Sbjct: 231 TLLFSATQTKSVRDLARLSLKNPAYVSVHEH 261
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 133 bits (321), Expect = 7e-30
Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 6/214 (2%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS L++AI + + PTP+Q IP L G+D+ + LPILE
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 238 RLL------YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
RL + G R RVLVL PTREL AQVH + A+ +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q + + D+++A PGRL+D + S L +E+LVLDEADRMLD F +K+++ +
Sbjct: 122 QVQAMAKGVDVLVACPGRLLD-LAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR 180
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
KRQ +LFSAT S+++ DLA L P ++ V
Sbjct: 181 LPAKRQNLLFSATFSKDITDLADKLLHNPERIEV 214
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 133 bits (321), Expect = 7e-30
Identities = 81/214 (37%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N +F + L + KAI + + PTPIQA IP+ + G DV + LPI
Sbjct: 19 NVTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPI 78
Query: 232 LERLLYKAKGGD----RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
L RL+ A R L+L PTREL QV A A+F D+
Sbjct: 79 LNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINP 138
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q LR+ ++VIATPGRL+DH++ S L ++VLVLDEADRMLD F ++ II
Sbjct: 139 QIQTLRRGVELVIATPGRLLDHVQQK-SINLGQVQVLVLDEADRMLDMGFLPDLQRIINL 197
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQ +LFSAT S E++ LA + P + V
Sbjct: 198 LPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV 231
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 132 bits (320), Expect = 9e-30
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 2/215 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D+ SF ++ L++P+++A+ NF +PT +QA TIP L G+D+ +++
Sbjct: 4 DKIISFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLI 63
Query: 226 PILERLL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
PI+++LL ++ G + L++ PTREL Q+ AV LA + Q
Sbjct: 64 PIVQKLLTFRGLPGPK---ALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQ 120
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+L PDI+I TPGR ID I N L ++ VLDEADR+L + F Q+ I+ Q
Sbjct: 121 RELLTPAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQL 180
Query: 583 SPKRQTMLFSATMSEEVKDLAA-VSLKKPVKLFVN 684
K QT+LF+AT++++V LA + K K+ +N
Sbjct: 181 PEKHQTLLFTATLNDQVAKLATKIQKKSSEKISIN 215
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 132 bits (318), Expect = 2e-29
Identities = 78/214 (36%), Positives = 114/214 (53%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E +F ++ ++ L +A L + PT IQ IP+AL G+D+ + L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
PIL LL + R+ LVL PTREL Q+ L D Q
Sbjct: 81 PILNALLETPQ---RLF-ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQS 136
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
L + P I+IATPGRLIDH+ NT F L +++ LV+DEADR+L+ F ++ +I++
Sbjct: 137 LALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
R+T LFSATM+++V+ L +LK PVK V+S
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSS 230
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 131 bits (317), Expect = 2e-29
Identities = 71/197 (36%), Positives = 109/197 (55%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + LS +++A+ L PTPIQ +IP + G+D+ ++LP+L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++ + G R R LVL PTREL Q+H + A++ D QE L+
Sbjct: 62 KIAEGRRHGIR-NRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLK 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+N DIV+ATPGRL+DH+R + L + ++++DEADRMLD F + I+RQ RQ
Sbjct: 121 RNWDIVVATPGRLLDHVRRN-NLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQ 179
Query: 598 TMLFSATMSEEVKDLAA 648
++LFSAT +++LAA
Sbjct: 180 SLLFSATCPPRIQELAA 196
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 131 bits (317), Expect = 2e-29
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE- 237
F ++ +S AI +N+ H T IQA +IP +LG DV +++P +E
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 238 --RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
RL + + G T V+VL PTREL Q H V ++L ++ D++ +
Sbjct: 148 LCRLRFSPRNG---TGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQ 204
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L + ++++ATPGRL+DH++ T SF ++ L++DEADR+L++ F EQMK+I + +
Sbjct: 205 LAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQ 264
Query: 592 -RQTMLFSATMSEEVKDLAAVS 654
RQT+LFSAT +E+V+D A ++
Sbjct: 265 GRQTVLFSATQTEKVEDFAKLT 286
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 131 bits (317), Expect = 2e-29
Identities = 70/203 (34%), Positives = 112/203 (55%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ F ++ +S P+ +AI + F H T IQ IP L +D+ +++P+
Sbjct: 49 SGKFEDLPISEPVKRAIKDMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPV 108
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
+E +L T +++ PTREL Q + V +L QF + + +
Sbjct: 109 VELMLSLGLQPRNGTGAIIISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQN 168
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L + I++ATPGRL+DH+ NT F H+++ LV+DEADR+LD F +M++II+
Sbjct: 169 LEKGVTILVATPGRLLDHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTV 228
Query: 592 RQTMLFSATMSEEVKDLAAVSLK 660
RQTMLFSAT++E+ K+LA +LK
Sbjct: 229 RQTMLFSATLNEKTKNLANAALK 251
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 131 bits (316), Expect = 3e-29
Identities = 74/208 (35%), Positives = 114/208 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ LS ++KA+ + F P+PIQA IP L GKDV + +PI+E
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL+ G R + LVL PTREL QV ++ + ++ Q LR
Sbjct: 67 RLV----PGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLR 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
D+VI TPGR++DH+ + + L + ++VLDEAD MLD F E +++I++ +RQ
Sbjct: 123 FGVDVVIGTPGRILDHLGRS-TLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQ 181
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
T+LFSATM E++ LA ++ P+ + V
Sbjct: 182 TLLFSATMPPEIRRLAGRYMRDPITISV 209
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 130 bits (315), Expect = 4e-29
Identities = 77/210 (36%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ L PL++ + LN+ PTP+QA IP L GKDV + LP+L+
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 238 RLLYKAKG-GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
RL+ RVLVLVPTREL QV + + Q L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R+ D+++ATPGRL+D R + ++ LVLDEADRMLD FA ++ + +R
Sbjct: 122 RKGVDVLVATPGRLLDLNRQN-AVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQR 180
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
QT+LFSAT S++++ +AA L+ PV + V+
Sbjct: 181 QTLLFSATFSDDIRAMAATILRGPVNISVS 210
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 130 bits (315), Expect = 4e-29
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 2/215 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F +MNL P+ KAI + F PTPIQ IP+ L G+DV +++P
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 229 ILERLLYKAKGGDRIT--RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
++ +L + RI R L++VPTREL Q+ +V + +F ++ Q
Sbjct: 357 LINKL----QNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQ 412
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L NPDI+IATPGRL I T L+ +E L+ DE D + + FA+QMK I+++
Sbjct: 413 FESLASNPDIIIATPGRLSQLIDET-DLSLNKVEFLIFDECDYLFEMGFADQMKTILKKV 471
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
S +RQT++FSAT+ EE+ A LK+ V + ++S
Sbjct: 472 SQQRQTLMFSATIPEELSSFARAGLKEYVFVKLDS 506
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 130 bits (314), Expect = 5e-29
Identities = 77/224 (34%), Positives = 117/224 (52%), Gaps = 2/224 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+++ F +M LS+ +++ I + PTPIQ TIPIAL G+DV +++
Sbjct: 35 NKSGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLI 94
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+ E+L K + R L+L PTREL Q +++ +F + Q
Sbjct: 95 PMFEKL--KTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQF 152
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
S + NPDI++ATPGR + HI L SIE ++ DEADR+ + F EQ+ EI +
Sbjct: 153 SAIHGNPDIIVATPGRFL-HICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLP 211
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQL 711
RQT+LFSAT+ + + + A L+ P V+L V S L+L
Sbjct: 212 KNRQTLLFSATLPKVLVEFATAGLRNPVLVRLDVESKLPDELKL 255
>UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=1;
uncultured gamma proteobacterium|Rep: Probable
ATP-dependent RNA helicase - uncultured gamma
proteobacterium
Length = 505
Score = 130 bits (314), Expect = 5e-29
Identities = 77/208 (37%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++L R L + +L T +Q +P AL G+D+ Y++P+ ++
Sbjct: 60 FEELDLDRQLRLGLDALELGDATEVQKLAVPAALAGRDLLVSAETGSGKTLAYLIPLAQK 119
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+L G + T+ L+LVPTREL QV RQL D KYQ+S LRQ
Sbjct: 120 ILAAPAGTTQGTQALILVPTRELARQVLKHIRQLLAKSPLKAQAITGGADFKYQKSQLRQ 179
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+P+I++ TPGRL++H R S L ++ LVLDEADRMLD F E + I C RQ
Sbjct: 180 DPEIIVGTPGRLLEHCRKL-STDLGRLQTLVLDEADRMLDMGFREDVLAIADFCPASRQM 238
Query: 601 MLFSATMSEE-VKDLAAVSLKKPVKLFV 681
+L SAT+S V D+AA P + V
Sbjct: 239 LLLSATLSHRGVGDIAATLRLNPQSIAV 266
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 130 bits (314), Expect = 5e-29
Identities = 72/188 (38%), Positives = 107/188 (56%)
Frame = +1
Query: 121 HPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPT 300
HPTPIQ A IP AL G+DV + +P+L LL + RI V VL P+
Sbjct: 54 HPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQ---RIYCV-VLAPS 109
Query: 301 RELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTP 480
REL Q+ R L+ D+ +Q S L + P +++A+PGRL DH+ NT
Sbjct: 110 RELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTK 169
Query: 481 SFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLK 660
F L +++ LV+DEADR+L + F E++ +II +RQT LFSATM++++ L ++LK
Sbjct: 170 GFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKLQKMALK 229
Query: 661 KPVKLFVN 684
P+ + V+
Sbjct: 230 DPISVQVD 237
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 130 bits (314), Expect = 5e-29
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS +++A+ + PTPIQ IP L G+D+ + LP+L+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 238 RLLYKAKG--GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
L+ + G R R L+L PTREL AQ+ R +++ + Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
LR D+++ATPGRL+D + + + L +E+LVLDEADRMLD F ++ ++ + K
Sbjct: 122 LRGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQ +LFSAT S+++K LA L P+++ V
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEV 210
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 130 bits (313), Expect = 6e-29
Identities = 79/208 (37%), Positives = 109/208 (52%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F N+NL P++KA+ + PTPIQ +IPI L GKD+ + +PIL+
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L YK I + LVL PTREL Q+ ++ K Q LR
Sbjct: 62 KL-YKTDHRKGI-KALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALR 119
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
I++ATPGRL+D I + L S++ VLDEADRMLD F +K I++ +RQ
Sbjct: 120 SGIQILVATPGRLLDLI-SQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
T+ FSATM E++ LA L KP K+ V
Sbjct: 179 TLFFSATMPPEIETLANSMLTKPEKVEV 206
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 130 bits (313), Expect = 6e-29
Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 2/212 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L L ++ +L + PT IQ+ +P AL G+D+ + LPIL+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RLL + + L+L PTREL Q+ + D Q L
Sbjct: 112 RLLQRTQR----FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALA 167
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SP-K 591
+ P +V+ +PGR++DH++ T F L S++VLVLDEADR+L F ++ ++ SP +
Sbjct: 168 KKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAE 227
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
RQTMLFSATM+ +V L SLKKPVKL VNS
Sbjct: 228 RQTMLFSATMTTKVSKLQKASLKKPVKLEVNS 259
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 129 bits (312), Expect = 8e-29
Identities = 74/206 (35%), Positives = 111/206 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L PL++A+ +L + PTPIQ A +P L GKD+ + LP+L+
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
R+ A + LVLVPTREL QV + Q + Q VL+
Sbjct: 97 RITPGAHAPFTAS-ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLK 155
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D+V+ATPGR +DH++ + L + V+VLDEAD MLD FAE ++ I+ KRQ
Sbjct: 156 RGVDVVVATPGRALDHLQRK-TLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQ 214
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
T LFSAT+ + +A L++PV++
Sbjct: 215 TALFSATLPPRIASIAERHLREPVRV 240
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 129 bits (312), Expect = 8e-29
Identities = 79/220 (35%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
++F +M L++ L++AI F PTPIQ TIP+ L G+DV +++P++
Sbjct: 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
E L K+ + TR L+L P REL Q V + ++ ++ Q S+L
Sbjct: 129 EHL--KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLL 186
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
PDIV+ATPGR + H++ L SIE +V DEADR+ + FA Q+ EI+ R
Sbjct: 187 SGKPDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSR 245
Query: 595 QTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQ 708
QT+LFSAT+ + D A L+ P V+L V S LQ
Sbjct: 246 QTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQ 285
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 129 bits (311), Expect = 1e-28
Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ +F + LS ++ A+ +V+PTPIQA IP L GKDV + LP+
Sbjct: 4 DVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPL 63
Query: 232 LERLLYKAKGG----DRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
L RL A R L++ PTREL Q+ R+ ++ +++
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEP 123
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q + L+ +I++ATPGRL+D + + E+LVLDEADRMLD F +K ++
Sbjct: 124 QIAALQAGVEILVATPGRLLDLVEQK-AVNFSKTEILVLDEADRMLDMGFLPDIKRVMAL 182
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
SP+RQ+++FSAT S E++ LA LK+PV++
Sbjct: 183 LSPQRQSLMFSATFSGEIRKLADSLLKQPVRI 214
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 129 bits (311), Expect = 1e-28
Identities = 76/208 (36%), Positives = 111/208 (53%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS P+M+AI L + HPTPIQA IP L G DV + LP+L++
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L ++ R+ R L+L PTREL QV + ++ + Q VL +
Sbjct: 353 LA-GSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNR 411
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
D++IATPGRL+D + L LV+DEADRMLD F +++I+ RQT
Sbjct: 412 GVDVLIATPGRLLD-LFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQT 470
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+ FSATM+ E++ LA L+ PV++ V+
Sbjct: 471 LFFSATMAPEIRRLADAFLRHPVEITVS 498
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 129 bits (311), Expect = 1e-28
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + +L + ++K I +L F T +Q TIP AL +D+ +++P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
LL K + TR L+LVPTREL Q+ + LA+F + K+Q ++ R+
Sbjct: 62 LLTH-KAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRK 120
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS--PKR 594
NP+I+IATPGRLIDH++ + +E +LDEADRMLD F E + I CS K
Sbjct: 121 NPEIIIATPGRLIDHLKQKKDL-MEDVEYFILDEADRMLDMGFEEDVLTIANACSGKAKP 179
Query: 595 QTMLFSATMSEE-VKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
QT+LFSAT+ + +K + P ++ V+S G +E
Sbjct: 180 QTLLFSATLQQRGLKHVIKQIQNDPEEIVVDSFRGEHSNIE 220
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 129 bits (311), Expect = 1e-28
Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L L++A+ F PT IQAA IP AL G+DV Y+LP L+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL + R+L+L PTREL QV R+LA+ V
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+N DIV+AT GRL+ +I+ +F ++E L+LDEADRMLD FA+ ++ I + ++Q
Sbjct: 125 ENQDIVVATTGRLLQYIKE-ENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQ 183
Query: 598 TMLFSATM-SEEVKDLAAVSLKKPVKLFVN 684
T+LFSAT+ + ++D A L+ PV++ N
Sbjct: 184 TLLFSATLEGDAIQDFAERLLEDPVEVSAN 213
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 128 bits (310), Expect = 1e-28
Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L L + L F PTPIQ IP L G+DV Y LP+++
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 238 RLLYKAKG--GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
L +++ + R L+L PTREL QV +Q AQ ++ Q+
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L + DI+IATPGRL+DH+ T L+ +++LVLDEADRMLD F ++ I+++ +
Sbjct: 124 LAKGVDILIATPGRLLDHLF-TKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEE 182
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+LFSAT VK LA +K+PV++ V
Sbjct: 183 RQTLLFSATFETRVKALAYRLMKEPVEVQV 212
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 128 bits (310), Expect = 1e-28
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Frame = +1
Query: 49 ENASFYNM-NL-SRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
E+ SF ++ NL + +KAI + F + T IQ +I L G+D+ ++
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFL 234
Query: 223 LPILERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+P +E L+ K + R T VL+L PTREL Q V ++L +
Sbjct: 235 IPAVE-LIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSA 293
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
+ L +I++ATPGRL+DH++NTP F +++ LV+DEADR+LD F E++K+II+
Sbjct: 294 EAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL 353
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKK 663
+RQTMLFSAT + +V+DLA +SLKK
Sbjct: 354 LPTRRQTMLFSATQTRKVEDLARISLKK 381
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 128 bits (309), Expect = 2e-28
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 3/210 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + + + K I F TPIQ +P+AL GKDV +++ I +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 241 LLYKAK-GGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL +AK GG+ R L+L PTREL Q+ + L ++ D Q L+
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP--K 591
DIVI TPGRLID+++ + + +E LV+DEADRM D F ++ I+R+ P K
Sbjct: 123 AGADIVIGTPGRLIDYLKQ-KVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPYDK 181
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQ +LFSAT++ V +LA + P K+ V
Sbjct: 182 RQNLLFSATLNTRVMELAYEFMNMPEKVSV 211
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 128 bits (309), Expect = 2e-28
Identities = 71/203 (34%), Positives = 107/203 (52%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F LS+ KA+ FVHPT +Q +I AL GKDV +++P+LE
Sbjct: 74 FAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEH 133
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L +++ PTREL Q+ +++ + ++K++ + + Q
Sbjct: 134 LFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ 193
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I+I TPGRL+ H+ P F ++E+LVLDEADR LD F + + II P RQT
Sbjct: 194 C-NILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQT 252
Query: 601 MLFSATMSEEVKDLAAVSLKKPV 669
+LFSAT + V+DLA ++LK PV
Sbjct: 253 LLFSATQTNTVQDLARLNLKDPV 275
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 128 bits (309), Expect = 2e-28
Identities = 76/213 (35%), Positives = 114/213 (53%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E F + LS+ +K + + T IQ TI +AL GKDV +++
Sbjct: 66 NEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLV 125
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+LE L VL++ PTREL Q V R++ + D+K++
Sbjct: 126 PVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEA 185
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ N +I++ TPGRL+ H+ T SF +++LVLDEADR+LD FA+ M +I
Sbjct: 186 ERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLP 244
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
KRQT+LFSAT ++ VKDLA +SLK P ++V+
Sbjct: 245 KKRQTLLFSATQTKSVKDLARLSLKNPEYVWVH 277
>UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE48840p - Nasonia vitripennis
Length = 1378
Score = 128 bits (308), Expect = 3e-28
Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
Frame = +1
Query: 91 MKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 270
+KAI + F T IQA +IP L G+D+ +++P +E L+YK K R
Sbjct: 219 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVE-LIYKLKFMPR 277
Query: 271 I-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
T +++ PTREL Q V ++L ++ + + L + +IV+ATP
Sbjct: 278 NGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVATP 337
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRL+DH++NTP F +++ L++DEADR+LD F E++K+II +RQTMLFSAT ++
Sbjct: 338 GRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRRQTMLFSATQTK 397
Query: 628 EVKDLAAVSLKK-PVKLFVN 684
+ + L +++KK PV + V+
Sbjct: 398 KTEALTTLAVKKEPVYVGVD 417
>UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to RE48840p -
Nasonia vitripennis
Length = 1134
Score = 128 bits (308), Expect = 3e-28
Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
Frame = +1
Query: 91 MKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 270
+KAI + F T IQA +IP L G+D+ +++P +E L+YK K R
Sbjct: 644 LKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVE-LIYKLKFMPR 702
Query: 271 I-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
T +++ PTREL Q V ++L ++ + + L + +IV+ATP
Sbjct: 703 NGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGASRQTEAQKLSKGVNIVVATP 762
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRL+DH++NTP F +++ L++DEADR+LD F E++K+II +RQTMLFSAT ++
Sbjct: 763 GRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRRQTMLFSATQTK 822
Query: 628 EVKDLAAVSLKK-PVKLFVN 684
+ + L +++KK PV + V+
Sbjct: 823 KTEALTTLAVKKEPVYVGVD 842
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 128 bits (308), Expect = 3e-28
Identities = 72/216 (33%), Positives = 114/216 (52%)
Frame = +1
Query: 67 NMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLL 246
N NLS L+ A+ ++N PT IQ +IP+A+ G D+ Y+LP+++ +
Sbjct: 7 NFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFI 66
Query: 247 YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNP 426
K K T L+LVPTREL Q+H+ ++ + Q L++NP
Sbjct: 67 -KNK-----TTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNP 120
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTML 606
++I TPGR+IDH+ N S + I + VLDE DRMLD EQ++EI + KRQ ++
Sbjct: 121 KVIIGTPGRIIDHL-NRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLM 179
Query: 607 FSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
FSATM + + ++ L PV++ V + +++
Sbjct: 180 FSATMPKHIIAVSQKYLNNPVRITVGATNKAAAEIK 215
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 128 bits (308), Expect = 3e-28
Identities = 76/206 (36%), Positives = 107/206 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L +++I ++ PTPIQA TIP L GKD+ ++LPI+E
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L + K LVL PTREL AQV A + ++ ++ Q L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
DI++ATPGRL+D I N +++VLVLDEADRMLD F +K++I RQ
Sbjct: 145 GGVDILVATPGRLLDLI-NQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQ 203
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
M+FSAT S +K LA L PV++
Sbjct: 204 NMMFSATFSTPIKKLALGLLNDPVEI 229
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 128 bits (308), Expect = 3e-28
Identities = 79/218 (36%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + +LS +++A+ LN+ PT IQ IP + GKD+ + LPILE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 241 LLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L K + R TRVLVLVPTREL QV + A+ Q L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
DIV+ATPGRL+D + + L I+ LV DEADRM D F +K+I++ KRQ
Sbjct: 123 SGIDIVVATPGRLLD-LALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQ 181
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQL 711
+LFSAT EV L LK P+++ + L +
Sbjct: 182 NLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNI 219
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 127 bits (307), Expect = 3e-28
Identities = 72/205 (35%), Positives = 107/205 (52%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS ++A+ + TPIQAA IP+AL G+DV + LP++++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L+ + R+ R LV+ PTREL QV + + A+ QE L +
Sbjct: 64 LM-NGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDR 122
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
D++IATPGRL+DH + ++ LV+DEADRMLD F ++ I + PK+QT
Sbjct: 123 GVDVLIATPGRLLDHFERGKLL-MTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQT 181
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKL 675
+ FSATM E+ L LK PV++
Sbjct: 182 LFFSATMPPEITRLTKQFLKDPVRI 206
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 127 bits (307), Expect = 3e-28
Identities = 72/213 (33%), Positives = 109/213 (51%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F ++ + +++A ++ F HPTPIQ IP AL +DV + +P
Sbjct: 102 KKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIP 161
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
IL+ L K VL PTREL Q+ L D+ Q
Sbjct: 162 ILQALWDNPKP----FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSI 217
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L + P +++ATPGRL DH+ NT F L ++ LV+DEADR+LD F + ++++
Sbjct: 218 ALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPR 277
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+R+TMLFSATM+ +V L SLK PV++ V++
Sbjct: 278 ERRTMLFSATMTTKVAKLQRASLKNPVRVEVDT 310
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 127 bits (306), Expect = 4e-28
Identities = 75/208 (36%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L++PL+KA+ + PTPIQA IP+ + G+D+ + LPIL R
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 241 LLYKAKGGDRIT-RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L K R R LVL PTREL Q+ R + Q L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
D+V+ATPGRL+DH+ S L+ +E+ VLDEAD+MLD F +++I Q +RQ
Sbjct: 187 AGVDVVVATPGRLMDHL-GEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQ 245
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+ FSATM E+ LA LK P ++ +
Sbjct: 246 NLFFSATMPSEIGKLAGELLKNPAQVAI 273
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 127 bits (306), Expect = 4e-28
Identities = 73/220 (33%), Positives = 115/220 (52%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E+ D+ +F ++ + L +A L + PT IQ IPIAL GKD+
Sbjct: 32 EDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGK 91
Query: 208 XXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX 387
+ +PIL++LL K + R+ L+L PTREL Q+ L
Sbjct: 92 TAAFTIPILQKLLEKPQ---RLFS-LILAPTRELSLQIKEQLISLGSEIGLDVCLILGGL 147
Query: 388 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
D+ Q L + P I++ +PGR+ DH++NT F L +I+ LVLDEAD++L F + + +
Sbjct: 148 DMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNK 207
Query: 568 IIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
II + T L+SATM+ ++ L V+L KP+++ VN+
Sbjct: 208 IITSLPKDKVTYLYSATMTSKITKLQKVTLMKPIQINVNT 247
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 126 bits (305), Expect = 6e-28
Identities = 72/211 (34%), Positives = 114/211 (54%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ +F ++ + + L++ + ++N V PTP+Q +IP L GKD+ + LPI
Sbjct: 6 SVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPI 65
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++ + K + G L+LVPTREL QV Q A+ + Q++
Sbjct: 66 IQAVQQKKRNGT--PHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNK 123
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L + DI+IATPGRL+DH+ N + + VLVLDEADRMLD F ++ I+R+
Sbjct: 124 LEEGADILIATPGRLLDHLFNG-NVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPND 182
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+Q MLFSAT + +K +A + PV++ V+
Sbjct: 183 KQIMLFSATFEKRIKTIAYKLMDSPVEVEVS 213
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 126 bits (305), Expect = 6e-28
Identities = 78/219 (35%), Positives = 111/219 (50%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
+SF + L L + +L + PTPIQ+ IP+ L G D+ + LPI+
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
E+L G R R LVL PTREL QV T + + V+ Q L
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
++ DI++ATPGRL+D +R + L +E LVLDEADRMLD F + +++I+ + R
Sbjct: 124 KRGTDILVATPGRLLDLLRQ-KAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDR 182
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQL 711
QT+LF+AT E V+ LA L P K+ V Q+
Sbjct: 183 QTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQI 221
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 126 bits (305), Expect = 6e-28
Identities = 72/218 (33%), Positives = 110/218 (50%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L L+KA+ L + PTPIQ IP L GK+V ++LP+L R
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
K + R ++L PTREL QV Q A++ D Q+ L +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
D+++ATPGRL+D + + + VLVLDEADRMLD F E + II + +RQ
Sbjct: 123 GVDLLVATPGRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQN 181
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
+LFSAT+S++VK LA ++ +++ ++ ++
Sbjct: 182 LLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHID 219
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 126 bits (305), Expect = 6e-28
Identities = 76/209 (36%), Positives = 109/209 (52%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L + L A + HPT IQA+TI + G+D+ Y LP++
Sbjct: 54 TFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVN 113
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL + K VLV+VPTREL QV A L + D+ Q L
Sbjct: 114 WLLAQRK--TPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELS 171
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ P +V+ TPGR+ DH+ NT F L + LVLDEAD+MLD + +++ I+ Q R+
Sbjct: 172 KRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMNYEKEIDAILEQLPQNRR 231
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
TMLFSAT+S ++ L SL+ PV L V+
Sbjct: 232 TMLFSATLSTKIDRLQKASLRDPVLLQVH 260
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 126 bits (304), Expect = 8e-28
Identities = 71/203 (34%), Positives = 109/203 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + + +PL+ AI L + PT IQ IP+ L DV + L +L+
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL + R R LV+ PTREL Q++ + A+ D++ Q+ +L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DIVIATPGR+++H+ L +E+ VLDEADRMLD F ++++ I + Q
Sbjct: 122 EGVDIVIATPGRVLEHV--DKGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
T+LFSAT S++V+ L+ + L KP
Sbjct: 180 TLLFSATFSDKVRKLSKLILTKP 202
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 126 bits (304), Expect = 8e-28
Identities = 76/213 (35%), Positives = 114/213 (53%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E F + LS+ +K + + T IQ TI +AL GKDV +++
Sbjct: 66 NEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLV 125
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+LE L VL++ PTREL Q V R++ + D+K++
Sbjct: 126 PVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEA 185
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ N +I++ TPGRL+ H+ T F ++++LVLDEADR+LD FA+ M II
Sbjct: 186 ERIN-NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLP 244
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
KRQT+LFSAT ++ VKDLA +SLK P ++V+
Sbjct: 245 KKRQTLLFSATQTKSVKDLARLSLKDPEYVWVH 277
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 126 bits (304), Expect = 8e-28
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ SF + LS+ ++K I F PTPIQ TIP+ L GKDV ++LP+
Sbjct: 101 SGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPM 160
Query: 232 LERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
LE+L ++ AK G R ++L P+REL Q V + + ++ Q
Sbjct: 161 LEKLKVHSAKVG---ARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFK 217
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ NPDI+IATPGR + H++ L S+E + DEADR+ + F EQM E++
Sbjct: 218 MMMSNPDIIIATPGRFL-HLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASLPS 276
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPV 669
RQT+LFSAT+ + + + A L P+
Sbjct: 277 NRQTLLFSATLPKTLVEFAKAGLHDPI 303
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 126 bits (303), Expect = 1e-27
Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
ASF + + PL + L + PTPIQAATIP L G+DV + +P+L
Sbjct: 9 ASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLL 68
Query: 235 ERLLYKAKGGDRIT---RVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXX-DVKY 399
+RL ++AK ++ R LVLVPTREL QV + + F V
Sbjct: 69 QRL-FEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q LR D+++ATPGRL+D + + + L+ + LVLDEADRML F +++ +++
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASN-ALKLNRVLALVLDEADRMLSLGFTDELNQVLEA 186
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
K+QT+L+SAT EEV+ L A L +P++ + S
Sbjct: 187 LPAKKQTLLYSATFPEEVRALTAKLLHQPLEYHLQS 222
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 126 bits (303), Expect = 1e-27
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Frame = +1
Query: 13 DSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
D D + + F M LS P++KAI + + PTPIQ TIP+ L G+DV
Sbjct: 24 DDDVSGKKGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAK 83
Query: 193 XXXXXXXXYMLPILERLLYKA-KGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXX 369
+++P+ E+L + K G R LVL PTREL Q +QL +F
Sbjct: 84 TGSGKTGCFLIPLFEKLKQREIKSG---ARALVLTPTRELAIQTFKFIKQLGKFTDLKTI 140
Query: 370 XXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYF 549
+ Q + + PDI++ATPGR + H+ L S++ V DEADR+ + F
Sbjct: 141 LVLGGDSMDSQFAAIHTLPDIIVATPGRFL-HLCVEMDLKLSSVQYCVFDEADRLFEMGF 199
Query: 550 AEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQLE 714
EQ+ E +R+ RQ +LFSAT+ + + D A L P ++L V S L L+
Sbjct: 200 GEQLTETLRRLPEARQMVLFSATLPKLMVDFAKAGLSDPTLIRLDVESKIPEALDLK 256
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 126 bits (303), Expect = 1e-27
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F ++NL + AI + PTPIQ T+P+ L G DV +++P
Sbjct: 26 KSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIP 85
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+LE+L G R L+L PTR+L Q T++L +F ++ Q
Sbjct: 86 MLEKLKQHVPQGG--VRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFE 143
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L + PD++IATPGRL+ + L ++E +V DEAD + FAEQ+ +I+ Q S
Sbjct: 144 ELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSE 203
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQL 711
RQT+LFSAT+ + + A L++P V+L V + L+L
Sbjct: 204 NRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKL 246
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 126 bits (303), Expect = 1e-27
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 1/203 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS + + + T IQA ++ ++L GKDV +++P+LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLE- 118
Query: 241 LLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+LY+ K G LV+ PTREL Q+ V R++ + DVK ++ L
Sbjct: 119 ILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRLS 178
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ +I+IATPGRL+ H+ T F +++VLVLDEADR+LD F+ + I+ RQ
Sbjct: 179 RI-NILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQ 237
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
TMLFSAT ++ VKDLA +SL+ P
Sbjct: 238 TMLFSATQTKRVKDLARLSLQDP 260
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 125 bits (302), Expect = 1e-27
Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +NL ++ + ++NF+ TP+QAATIP L G+DV Y+LPIL+R
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV---KYQESV 411
L D + +++ PTREL Q+ + F D + Q
Sbjct: 63 LSAGEFASD-VVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRG 121
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
+ DIVIATPGRLI H+ N S L + VLDEADRMLD F + + +I +Q
Sbjct: 122 MAMGADIVIATPGRLISHL-NLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSS 180
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKL 675
QT++FSATM +++ LAA L+ P+++
Sbjct: 181 CQTVMFSATMPPKIRKLAASILRDPIEV 208
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 125 bits (302), Expect = 1e-27
Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
+ +F L+ PL +A+ L PTPIQ IP AL G+D+ + LP+
Sbjct: 3 STTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPL 62
Query: 232 LERLL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
L L+ K R T+ L+L PTREL Q+ L++ V+ Q
Sbjct: 63 LHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQ 122
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L + DI++ATPGRL+D + + L L+LDEADRMLD F + +I+ +C
Sbjct: 123 ALARGVDILVATPGRLLD-LMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPD 181
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQ+M+FSATM + ++DL+ L P K+ V
Sbjct: 182 DRQSMMFSATMPKPIEDLSKKILTNPQKVSV 212
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 125 bits (302), Expect = 1e-27
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 4/217 (1%)
Frame = +1
Query: 46 DENA---SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXX 216
DE+A F + L+ PL++AI ++ PTPIQA +IP+ L G D+
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 217 YMLPILERLLY-KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
++LPIL R+ +A+ R R LVL PTREL Q+ R +F
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q + D+++ATPGRL+DH+ L ++E +VLDEAD+MLD F +++I+
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVA-AGVIRLDAVETVVLDEADQMLDLGFIPAIRQIM 229
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+ +RQ ++FSATM + ++ LA L+ P ++ V+
Sbjct: 230 AKLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAVS 266
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 125 bits (302), Expect = 1e-27
Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF +NL L++A +LN+ PTPIQ+ IP AL G D+ + +PIL
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL + + +L PTREL Q+ L ++ Q L
Sbjct: 142 RLWHDQEP----YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLM 197
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKR 594
+ P I+IATPGRL+DH+ NT F L ++ LV+DEADR+LD F + I++ + +R
Sbjct: 198 RKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQER 257
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
T LFSATM+ ++ L SL PVK V++
Sbjct: 258 TTYLFSATMTSKIDKLQRASLTNPVKCAVSN 288
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 125 bits (302), Expect = 1e-27
Identities = 70/206 (33%), Positives = 109/206 (52%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F M L+ L++AI F PTPIQ TIP+ L +DV +++P
Sbjct: 84 KSGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIP 143
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
++ERL KA R +++ P+REL Q V ++L + ++ Q
Sbjct: 144 MIERL--KAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFG 201
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ NPDI+IATPGR + H++ S L S+ +V DEADR+ + FA Q+ EI+ P
Sbjct: 202 LMAANPDIIIATPGRFL-HLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPP 260
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKP 666
RQT+LFSAT+ + + A L++P
Sbjct: 261 SRQTLLFSATLPSSLVEFARAGLQEP 286
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 125 bits (301), Expect = 2e-27
Identities = 72/212 (33%), Positives = 108/212 (50%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P ++ A F + L L++++ +L + PTPIQ +P + G+D+ +
Sbjct: 52 PAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAF 111
Query: 220 MLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
LP+L RL + GD + LVLVPTREL QV + + +
Sbjct: 112 ALPLLHRLT-DDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGR 170
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q L Q D+V+ATPGR +DH+ + L + +VLDEAD MLD FAE + I+ Q
Sbjct: 171 QVRALVQGVDVVVATPGRALDHM-GRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQ 229
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
KRQT+LFSAT+ + +A L+ PV++
Sbjct: 230 APQKRQTVLFSATLPPRMDQIARRHLRDPVRI 261
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 125 bits (301), Expect = 2e-27
Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 1/207 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF +L L+++I SL + PTPIQAA IP AL GKD+ + +PIL+
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L A+ LVL PTREL Q+ L + Q L
Sbjct: 159 TLYTAAQP----YYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLM 214
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKR 594
+ P ++IATPGRLIDH+ +T F L ++ LV+DE DRM+D +A+ + +I++Q S +R
Sbjct: 215 RKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQR 274
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKL 675
T L++ATMS E++ SL PV++
Sbjct: 275 ITYLYTATMSREIEKFKR-SLNSPVQV 300
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 124 bits (300), Expect = 2e-27
Identities = 76/210 (36%), Positives = 109/210 (51%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS P++ AI ++ T +Q IP+AL GKD+ + LP+LE+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L K + R LV+ PTREL QV A ++ +QF ++ Q + Q
Sbjct: 84 LS-KQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 142
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
DI++ATPGRL D I L S+ LV+DEADRMLD F ++++ R + + QT
Sbjct: 143 GVDILVATPGRLFDIIGQF-HLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQT 201
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
MLFSAT S+ VK L+ L +P + V N
Sbjct: 202 MLFSATYSDAVKQLSHKMLNQPEWVNVAEN 231
>UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7;
cellular organisms|Rep: DEAD/DEAH box helicase, putative
- Ostreococcus tauri
Length = 1423
Score = 124 bits (300), Expect = 2e-27
Identities = 76/208 (36%), Positives = 107/208 (51%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS A+ F T IQ AT+P AL G+DV Y++P++E
Sbjct: 704 FIHLPLSSSTKSALKECKFKEMTAIQRATLPHALCGRDVLGPPKTGSGKTLAYVIPLVEL 763
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L K G +V+ PTREL Q+ ++ DV +E+
Sbjct: 764 LWRKKWGRQDGVGGIVISPTRELAIQIFQCLTRVGARHSMSAGLLIGGKDVS-EEANRVN 822
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I++ TPGRL+ H+ TP F +++LVLDEADRMLD FA+ + II KRQT
Sbjct: 823 KMNILVCTPGRLLQHMDETPLFDCVGLQMLVLDEADRMLDLGFAKTLNAIIENLPKKRQT 882
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+LFSAT ++ VKDLA + LK P L V+
Sbjct: 883 LLFSATQTKSVKDLARLGLKDPEYLSVH 910
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 124 bits (300), Expect = 2e-27
Identities = 72/206 (34%), Positives = 109/206 (52%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E F + +S+ + + FV PT IQ IP+AL G+DV +++P
Sbjct: 48 EVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIP 107
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
I+E L + LV+ PTREL Q V ++ D+K ++
Sbjct: 108 IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQK 167
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
+ + +IV+ TPGRL+ H+ TP+F S+++LVLDEADR+LD FA + II
Sbjct: 168 RIMKT-NIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPS 226
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKP 666
+RQT+L+SAT + VKDLA +SL++P
Sbjct: 227 ERQTLLYSATQTRSVKDLARLSLQEP 252
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 124 bits (299), Expect = 3e-27
Identities = 72/212 (33%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS +K + ++ T IQ +I +AL G D+ +++P++E
Sbjct: 43 FTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVME- 101
Query: 241 LLYKAKGGDRITRV--LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+LY K R+ + L++ PTREL Q++ R++ ++ D+ +++ L
Sbjct: 102 ILY-CKQWTRLDGLGALIITPTRELAYQIYETLRKVGRYHDISAGLIIGGKDLHFEKKRL 160
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
Q +I+I TPGRL+ H+ P F ++++LVLDEADR LD F + M II +R
Sbjct: 161 DQC-NIIICTPGRLLQHMDENPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLER 219
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
QT+LFSAT ++ VKDLA +SLK P+ + V+ N
Sbjct: 220 QTLLFSATQTKTVKDLARLSLKDPLYISVHEN 251
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 124 bits (299), Expect = 3e-27
Identities = 69/203 (33%), Positives = 110/203 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + NLS LMKAI + F TPIQA TIP+ L KDV + +P++E
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++ ++ + +V+ PTREL QV ++ Q D+ Q L+
Sbjct: 64 KINPESPN----IQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALK 119
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+NP+I++ TPGRL+DHI N + L+++ +V+DEAD ML+ F + ++ I+ + Q
Sbjct: 120 KNPNIIVGTPGRLLDHI-NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
T+LFSATM +K +A + +P
Sbjct: 179 TLLFSATMPAPIKRIAERFMTEP 201
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 124 bits (299), Expect = 3e-27
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E P + F ++ +S P +K + +F+ T IQA +IP++L G DV
Sbjct: 32 EYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGK 91
Query: 208 XXXYMLPILERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXX 384
+++P++E+L Y+ K + L++ PTREL Q++ V ++
Sbjct: 92 TLAFLVPVIEKL-YREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGG 150
Query: 385 XDVKYQ-ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
DVK++ E + R N I+I TPGR++ H+ ++++LVLDEADR LD F + +
Sbjct: 151 KDVKFELERISRIN--ILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTL 208
Query: 562 KEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVREDTQ 738
I+ SP RQT+LFSAT S+ V DLA +SL + + G + EA E Q
Sbjct: 209 DAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 124 bits (298), Expect = 4e-27
Identities = 77/216 (35%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D++ +F ++ L +P++ A SL + +P PIQ TIP A+ KD+ YML
Sbjct: 3 DDSYTFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYML 62
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
PI + LV PTREL Q+ VTR + + D Q
Sbjct: 63 PIFHHMWENPHS----FFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQV 118
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPS-FGLHSIEVLVLDEADRMLDE-YFAEQMKEIIRQ 579
L+ P +V+ATPGRL IRN P L+ +E LV DEAD ML E F ++ I+ +
Sbjct: 119 KALKAQPHVVVATPGRLARLIRNNPKVIPLNKVECLVFDEADNMLREPSFQTDIQLILSK 178
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+ QT LFSATM EE++ LA ++ PV+L + S
Sbjct: 179 LNSTHQTYLFSATMPEEIEQLAKQTMSDPVRLSLTS 214
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 124 bits (298), Expect = 4e-27
Identities = 69/203 (33%), Positives = 110/203 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + LS+ +MKAI + F TPIQA TIP++L KDV + +PI+E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++ K + + LV+ PTREL QV ++ D++ Q L+
Sbjct: 63 KVNVK----NSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALK 118
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
++P +++ TPGR+IDHI N + L + +VLDEAD ML+ F E ++ I+ +RQ
Sbjct: 119 KHPHVIVGTPGRIIDHI-NRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQ 177
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
T+LFSATM + ++ +A + +P
Sbjct: 178 TLLFSATMPDPIRRIAERFMNEP 200
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 123 bits (297), Expect = 5e-27
Identities = 72/209 (34%), Positives = 113/209 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS+ L++A+ L + PTP+QAA IP L+ +D+ ++LP+++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L + R+ R L+L PTREL AQV + ++ + Q++ L
Sbjct: 62 -ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALE 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D++IATPGRL+D L S E+LV+DEADRMLD F ++ I + RQ
Sbjct: 121 KGVDVLIATPGRLLDLFERGKIL-LSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
T+LFSATM +K LA L P ++ ++
Sbjct: 180 TLLFSATMPPAIKKLADRFLSNPKQIEIS 208
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 123 bits (297), Expect = 5e-27
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D F + ++ ++ ++ + + +PTPIQ A IP +LG+D+ + L
Sbjct: 48 DNENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFAL 107
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
P++E+L A + +VLV+ PTREL QV + ++ D + Q
Sbjct: 108 PLIEKL---ADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQ 164
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L++ D+V+ TPGR++DHIR +F ++SI LVLDEAD ML+ F E ++ II Q
Sbjct: 165 IYALKRKVDVVVGTPGRIMDHIRQG-TFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQL 223
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+Q +LFSATM E++++A L P ++ + S
Sbjct: 224 PKNKQMVLFSATMPNEIRNIAKKYLNDPAEILIKS 258
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 123 bits (297), Expect = 5e-27
Identities = 76/210 (36%), Positives = 110/210 (52%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ LS + SL + PT IQ IP L G D+ ++LP+LE
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD--VKYQESV 411
+L G+ +T LVLVPTREL QV + ++ + Q
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L + DIV+ATPGRL+D +R + L ++ LVLDEADRMLD FA+++ +I+ Q
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKN-ALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGN 180
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
QT+LFSAT ++VK+L L+ PV++ V
Sbjct: 181 VQTLLFSATFPDKVKELTEELLRNPVEISV 210
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 123 bits (297), Expect = 5e-27
Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + LS ++KA+ + P PIQ IP L GKD+ ++LPIL+
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L K G +R LVLVPTREL QV V + + V +++
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 418 -QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
Q +I+IATPGRL+D + ++ + L +EVLVLDEAD+ML+ F E+M I + KR
Sbjct: 130 LQGVEILIATPGRLLDLV-DSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKL 675
Q +LFSAT+ ++V + L PVK+
Sbjct: 189 QNLLFSATLGKDVDTITEFLLHDPVKI 215
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 123 bits (297), Expect = 5e-27
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P + ++F + L ++KA+G L + PTPIQ+ IP L KD+ +
Sbjct: 98 PKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAF 157
Query: 220 MLPILERLLYKAKG-GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
LP++++LL R R ++L PTREL Q+H + ++
Sbjct: 158 ALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIR 217
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
Q L + DI++ATPGRL D + + L + LVLDEAD+MLD F +K II
Sbjct: 218 KQMRDLSKGVDILVATPGRLEDLV-DQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIIS 276
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+ + RQT+LFSATMS+E+K L L PV++ V
Sbjct: 277 KVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV 311
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 123 bits (297), Expect = 5e-27
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + + L+KA L + +P+ IQA +P AL GKDV + +PIL+
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 238 RLLY--------KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
LL K + D VL PTREL Q+ L D
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q L + P +++ATPGRL DH+ +T F L S++ LVLDEADR+L+E F + + +I+
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ +R+T LFSATM+++V+ L L+ PVK+
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKI 223
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 123 bits (296), Expect = 7e-27
Identities = 77/187 (41%), Positives = 101/187 (54%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + +L L AI + PT +Q A+IP AL GKD+ Y+LP L R
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+L + K I RVLV+VPTREL QV L Q + +YQ S+LR+
Sbjct: 62 VLSERKPKAGI-RVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLLRR 120
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
NP+IVIATPGR+ +H+ N S L +E LVLDE DRMLD F +++ I Q QT
Sbjct: 121 NPEIVIATPGRMTEHL-NKNSTDLLDVECLVLDECDRMLDMGFRDEVLAIAGQIRNDHQT 179
Query: 601 MLFSATM 621
+L SAT+
Sbjct: 180 LLLSATL 186
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 123 bits (296), Expect = 7e-27
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS+P+++A+ + PTPIQ IP L G+D+ +MLP ++R
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 241 LLYKAKGGDRIT----RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
L + +RI R+LVL PTREL +Q+ A + V +
Sbjct: 64 L---READNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRN 120
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L + DI+IATPGRL+D I + +F L S+EVLVLDEAD+MLD F ++ I +
Sbjct: 121 KLHRGTDILIATPGRLLDLI-DQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPK 179
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+RQT+ FSATM + +K+L + PV++ V
Sbjct: 180 ERQTLFFSATMPKAIKELVSGYCNNPVQVSV 210
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 123 bits (296), Expect = 7e-27
Identities = 76/208 (36%), Positives = 107/208 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++NL+ PL A+ LNF PTPIQ + G+DV Y+LP+L
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L Y + RI L++VPTREL QV +LA++ ++ Q L
Sbjct: 70 MLKYSEQKNPRI---LIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLM 126
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
Q DIV+ATP RL D + + L SI+ V+DE D MLD F Q+ II RQ
Sbjct: 127 QGLDIVVATPRRLYDLVLRR-AVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQ 185
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+++FSATM+E V+++ + K P K+ V
Sbjct: 186 SIMFSATMTETVEEMIDTNFKAPEKISV 213
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 123 bits (296), Expect = 7e-27
Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 2/235 (0%)
Frame = +1
Query: 16 SDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXX 195
+D + +++ F +M L L+K I + PTPIQ TIP+ L G+DV
Sbjct: 26 ADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKT 85
Query: 196 XXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXX 375
+++P+ E+L + + + R L+L PTREL Q + ++L +F
Sbjct: 86 GSGKTACFLIPLFEKL--QRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILV 143
Query: 376 XXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAE 555
+ Q S + PD+++ATPGR + H+ L+SIE +V DEADR+ + F E
Sbjct: 144 LGGDSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGE 202
Query: 556 QMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV--KLFVNSNXGGGLQLE 714
Q+ E + + RQT++FSAT+ + + + A L PV +L V S L L+
Sbjct: 203 QLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPVLIRLDVESKLPDALALK 257
>UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 648
Score = 123 bits (296), Expect = 7e-27
Identities = 81/241 (33%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
+ L + L++A+ L ++ PTP+QA IP AL G DV ++LP+ LL
Sbjct: 5 LGLCKALIRAVSHLGYISPTPVQAEAIPAALRGVDVCARAVTGSGKTAAFLLPLAHLLLT 64
Query: 250 K-------AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV-KYQE 405
+ R R +VL+PTRELG Q + QL QF QE
Sbjct: 65 RQPQKATALNSRRRFIRAVVLLPTRELGVQCQDMLAQLLQFTSGLTVALAIGGVAPAAQE 124
Query: 406 SVLRQNPDIVIATPGRLIDHI---RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
+ L PDI++ATPGRL+D+I +N L +EVLVLDE D+ML +Q+ +I++
Sbjct: 125 AALDAVPDILVATPGRLVDYIHNYKNGAGLDLTGVEVLVLDECDKMLTVTLQDQVLDILQ 184
Query: 577 QCSPK-RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVREDTQGXRVH 753
+ RQ ++FSATM++EV + A L KP+ + + G + L++ +R+ R
Sbjct: 185 HVPEETRQVLMFSATMTKEVDEFAKEHLFKPINVDI-----GHIALQSKLRQQFVRIRTT 239
Query: 754 P 756
P
Sbjct: 240 P 240
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 123 bits (296), Expect = 7e-27
Identities = 75/234 (32%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E + F ++++ L K + LNFV T IQA IP L GKD+
Sbjct: 137 ETKETFYSQTKFEDLDICEALKKGLKELNFVTLTEIQAKCIPHFLNGKDILGAAKTGSGK 196
Query: 208 XXXYMLP---ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXX 378
+++P IL + + K G T VL++ PTREL Q++ V + L ++
Sbjct: 197 TLAFLVPSINILYNIKFLPKNG---TGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIII 253
Query: 379 XXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQ 558
++ +I+IATPGRL+DH++NT F ++ L++DEADR+L F E+
Sbjct: 254 GGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLIIDEADRLLQIGFEEE 313
Query: 559 MKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAG 720
+ I+++ KRQT LFSAT + +V++L +SL+KP+ + V + +L+ G
Sbjct: 314 INLIVKRLPKKRQTALFSATQTTKVENLIRLSLQKPIFIEVTTKIATVERLQQG 367
>UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 32 - Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 123 bits (296), Expect = 7e-27
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
E P Y A F + LS + + + IQ A +P AL G+DV
Sbjct: 72 EHPEYGACARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKT 131
Query: 211 XXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
+++P+LE+L + G + +VL P ++L Q+ V +++ +
Sbjct: 132 LAFVIPVLEKLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLHGFSAACIVGNRK 191
Query: 391 VKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIE-VLVLDEADRMLDEYFAEQMKE 567
+E + N +I++ TPGRL+ H+ T +F I+ +LV+DEAD++LD+ F EQ+
Sbjct: 192 GLDEEKAVINNMNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDN 251
Query: 568 IIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
++ Q RQT+LFSAT ++ VKDLA VSLK P + V+
Sbjct: 252 VVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVH 290
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 122 bits (295), Expect = 1e-26
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +NLS + AI + F +PIQ+ IP+ L GKD+ + +P +E
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESVLR 417
L ++K + L+L PTREL QV R+L ++ +++ Q LR
Sbjct: 71 LEVESKH----LQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALR 126
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+NP IVIATPGR++DH+R S L I+++VLDEAD MLD F E M+ I++ RQ
Sbjct: 127 KNPQIVIATPGRMMDHMRRG-SIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQ 185
Query: 598 TMLFSATMSEEVKDL 642
T++FSATM+++V L
Sbjct: 186 TIMFSATMTDDVLTL 200
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 122 bits (295), Expect = 1e-26
Identities = 67/209 (32%), Positives = 110/209 (52%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + +S + + +V T +Q+A IP AL G+D+ +++PILE+
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L + + +++ PTREL AQ V ++ +F + E
Sbjct: 133 LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVH 192
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I++ PGRL+ H+ TP+F +++L+LDEADR+LD F Q+ II Q RQT
Sbjct: 193 EMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQT 252
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+LFSAT +++VKDLA +SL+ P + V++
Sbjct: 253 LLFSATQTKKVKDLARLSLRDPEYISVHA 281
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 122 bits (294), Expect = 1e-26
Identities = 67/213 (31%), Positives = 112/213 (52%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+N +F ++N+ ++++I L + PT IQ +P A L KD+ +++P
Sbjct: 154 QNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIP 213
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
IL+ L K + LV+ PTREL Q+ + L D+ Q
Sbjct: 214 ILQDL----KVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSL 269
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L + P+++++TPGR++DH+ NT F L +++ LV DEAD++L + F + +++ P
Sbjct: 270 NLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPP 329
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
R T LFSATM++ V L LK PVK+ V++
Sbjct: 330 NRITFLFSATMTKNVAKLKKACLKNPVKVEVSN 362
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 122 bits (293), Expect = 2e-26
Identities = 72/208 (34%), Positives = 111/208 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L+R L+ AI + PT IQ+ IP L G D+ Y LPIL
Sbjct: 6 NFEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILM 65
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++ Y A+G + R ++ PTREL Q+ +QLA++ K Q+ L+
Sbjct: 66 KIKY-AQGHN--PRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQ 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DI++ATPGR +D + L ++ +VLDEAD+M+D F Q+++++ KRQ
Sbjct: 123 KGVDIIVATPGRFLD-LYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKRQ 181
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+LFSATMSE V+ L L+ P+K+ V
Sbjct: 182 NLLFSATMSERVERLTEEFLEYPMKIEV 209
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 122 bits (293), Expect = 2e-26
Identities = 73/209 (34%), Positives = 107/209 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L++ ++KA+ L + P+PIQ IP AL G+DV + PIL+
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL G R R L+L PTREL Q+ + + Q L+
Sbjct: 62 RLGGDIPAG-RPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLK 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DI++ATPGRL+D ++ L +E+ VLDEADRMLD F ++ +++ +Q
Sbjct: 121 KGVDILVATPGRLLD-LQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
T+ FSATM EV DL LK PVK+ V+
Sbjct: 180 TLFFSATMPPEVMDLVNGLLKNPVKVAVD 208
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 122 bits (293), Expect = 2e-26
Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 2/210 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L++ + KAI F PT +Q TIP+ L K+V + LPI+
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 241 LLYK--AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
L K A+ G++ + LV+ PTREL Q+ + +++ ++ Q+ +L
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEIL 122
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+ DI++ATPGRLID ++ + L +E+ VLDEAD MLD F +K+I + C K+
Sbjct: 123 AKGVDILVATPGRLID-LQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKK 181
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
QT+LFSAT+ E++ +L+ +K K+ +N
Sbjct: 182 QTLLFSATIPEKIDELSKSIVKNATKVDIN 211
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 122 bits (293), Expect = 2e-26
Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L L+ A+ + + +PTPIQAA IP AL G D+ +MLP LER
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 241 LLYKAKGGD----RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
L A R+LVL PTREL Q+ + + ++ Q +
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
LR +IV+AT GRL+DH++ + L+ +E++VLDEADRMLD F + +++I++
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQK-NISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPK 209
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKP 666
+RQT+LFSAT S ++ LA + P
Sbjct: 210 QRQTLLFSATFSAPIRKLAQDFMNAP 235
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 122 bits (293), Expect = 2e-26
Identities = 80/230 (34%), Positives = 120/230 (52%), Gaps = 10/230 (4%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P E F + +S K + S +F++PTPIQ+ IP AL +D+ +
Sbjct: 55 PPSEITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAF 114
Query: 220 MLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
++P+LERL + G +V+ PTREL Q R + ++ +K
Sbjct: 115 LIPLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHNFSAGLVIGGKPLKE 174
Query: 400 -QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
QE + R N I+IATPGRL+ H+ +T F +++VLVLDEADR+LD F +K I+
Sbjct: 175 EQERLGRMN--ILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVS 232
Query: 577 QCS---------PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGG 699
S P RQT+LFSAT S+++ LA +SL +P L+++ N G
Sbjct: 233 HFSPVQTAPGSRPSRQTLLFSATQSKDLAALAKLSLYEP--LYISCNKPG 280
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 121 bits (292), Expect = 2e-26
Identities = 78/214 (36%), Positives = 114/214 (53%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E PP D SF ++LS + +A+ F P+PIQAA IP AL GKDV
Sbjct: 38 ETPPEMD---SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGK 94
Query: 208 XXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX 387
+ +PILE+L + R + +V+VPTREL QV A +LA+
Sbjct: 95 TAAFSIPILEQL--DSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGK 152
Query: 388 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
++ Q L +V+ TPGR+ DH++ + +++ +VLDEADRMLD F Q++
Sbjct: 153 NMNRQLRQLENGTQLVVGTPGRVHDHLQRG-TLRTNNVWCVVLDEADRMLDIGFRPQIER 211
Query: 568 IIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
I+R+C RQT+L SAT+ V+ LA + +PV
Sbjct: 212 IMRKCPRNRQTLLLSATLPPVVRRLAESYMHEPV 245
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 121 bits (292), Expect = 2e-26
Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F +M+L++ L+KAI F PTPIQ +IP+ L G D+ +++P
Sbjct: 228 KTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIP 287
Query: 229 ILERLLYKAKGGDRIT----RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
++++L GD T R ++L PTREL Q V + +Q ++
Sbjct: 288 MIQKL------GDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSME 341
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
Q + L +NPDI+IATPGRL+ H+ T L ++ +V DEADR+ + F EQ+ EI+
Sbjct: 342 DQFTDLARNPDIIIATPGRLMHHLLET-GMSLSKVQYIVFDEADRLFEMGFNEQLTEILS 400
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKP 666
+ S RQT+LFSAT+ + D L P
Sbjct: 401 KLSENRQTLLFSATLPSLLVDFVRAGLNNP 430
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 121 bits (292), Expect = 2e-26
Identities = 72/210 (34%), Positives = 114/210 (54%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + + ++++I F PT IQ IP+ L GKD+ + I++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++ + G+ I R LVL PTREL QV ++ ++ + Q L
Sbjct: 63 KI----EKGNGI-RALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL- 116
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D+V+ATPGRL+DHI + L +E+LVLDEADRMLD F + ++EII +C RQ
Sbjct: 117 ERADVVVATPGRLLDHIERG-TIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQ 175
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
TM+FSAT+S++++ L++ + P K+F +
Sbjct: 176 TMMFSATVSKDIQYLSSKYMNNPSKVFAKA 205
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 121 bits (292), Expect = 2e-26
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F +M L + + + + PTPIQ +P+ L G D+ +++P
Sbjct: 47 KSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVP 106
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+++RL G R L+L PTR+L Q +QL +F ++ Q
Sbjct: 107 MIQRLRRHDAGAG--IRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFE 164
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L +NPDI+IATPGRL+ H+ L ++E +V DEAD + +Q+ +I+ + S
Sbjct: 165 ELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSD 224
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQL 711
RQT+LFSAT+ + + D A L+ P V+L ++ L+L
Sbjct: 225 TRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKL 267
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 121 bits (291), Expect = 3e-26
Identities = 74/208 (35%), Positives = 108/208 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F +++L+ + KAI + PTPIQA IP AL G+DV + LP++
Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L + + R+ R LVL PTREL AQV A+ K QE +
Sbjct: 72 -MLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAID 130
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D++IATPGRL+DH L+ ++V+V+DEADRMLD F ++ I RQ
Sbjct: 131 KGVDVLIATPGRLLDHFERGKLI-LNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTRQ 189
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
T+ FSATM+ E++ + L P K+ V
Sbjct: 190 TLFFSATMAPEIERITNTFLSNPEKIEV 217
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 121 bits (291), Expect = 3e-26
Identities = 80/227 (35%), Positives = 119/227 (52%), Gaps = 3/227 (1%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF +N L +A+ +LNF T IQA IP+ GKD+ + P++E
Sbjct: 2 SFEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLIE 61
Query: 238 RLLYKAKGGDRITRV-LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX--DVKYQES 408
R+ +I+ + LVLVPTREL QV A+F ++ Q
Sbjct: 62 RINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDGQIR 121
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
LR D++IATPGR+I+ I N L +E+L+LDEAD+MLD FA+++KE++
Sbjct: 122 KLRMGLDVLIATPGRIIELI-NLGEVRLVELEMLILDEADKMLDLGFADELKELLEALPK 180
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRE 729
KRQ +LFSAT+ ++V+ LA L V+L ++ + G +E V E
Sbjct: 181 KRQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQITGDNIEQRVIE 227
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 121 bits (291), Expect = 3e-26
Identities = 75/204 (36%), Positives = 104/204 (50%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F N+ LS ++KA+ + PTPIQ+ TIP L KDV ++LP+L
Sbjct: 7 NFDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLT 66
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL K + R+ R L+L PTREL AQV + +Q+ L
Sbjct: 67 -LLEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLE 125
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D++IATPGRL+DH L +E+LV+DEADRMLD F ++ I + RQ
Sbjct: 126 RGADVLIATPGRLLDHFERGTLL-LMGVEILVIDEADRMLDMGFIPDIERICKLTPFTRQ 184
Query: 598 TMLFSATMSEEVKDLAAVSLKKPV 669
T+ FSATM+ E+ L L PV
Sbjct: 185 TLFFSATMAPEIIKLTEQFLHSPV 208
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 121 bits (291), Expect = 3e-26
Identities = 73/224 (32%), Positives = 114/224 (50%)
Frame = +1
Query: 13 DSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
D D F PY F + LS+ + + +V T IQ A++P +L G+D+
Sbjct: 59 DGDSFS---PYAGCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAK 115
Query: 193 XXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXX 372
+++P+LE+L G + +++ PTREL Q+ V + + ++
Sbjct: 116 TGSGKTLAFLIPVLEKLYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYHSFSAGL 175
Query: 373 XXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 552
E +I++ TPGRL+ H+ TP+F ++VLVLDEADR+LD F
Sbjct: 176 LIGGRKDVGMEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFK 235
Query: 553 EQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+ + II Q RQT+LFSAT ++ V+DLA +SLK P L V+
Sbjct: 236 KALNAIISQLPKHRQTLLFSATQTKSVQDLARLSLKDPEYLSVH 279
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 120 bits (290), Expect = 4e-26
Identities = 68/208 (32%), Positives = 105/208 (50%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + + + KAI + F P+PIQA IP L G DV + +P++E+
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+ R + L+L PTREL QV ++L++ + +Q L+Q
Sbjct: 68 V-----STGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQ 122
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+VI TPGR+IDH+R L + ++LDEAD MLD F + ++ I+RQ +RQT
Sbjct: 123 GVQVVIGTPGRIIDHLRRKTLI-LDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQT 181
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+LFSATM +K L+ + P + +N
Sbjct: 182 LLFSATMPPAIKKLSRKYMNDPQTVSIN 209
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 120 bits (290), Expect = 4e-26
Identities = 69/205 (33%), Positives = 106/205 (51%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXX 213
P Y + F +MNLS P+ A+ + +PTP+QA A+ GKD+
Sbjct: 22 PAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTA 81
Query: 214 XYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
+ LP+LE++ +R R L+L PTREL QV + LA+ +
Sbjct: 82 AFGLPLLEKI----PADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASM 137
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
K QE L + I++ TPGR+ DHI N + L + + VLDEAD ML++ F E++ I+
Sbjct: 138 KQQEDALEEGTPIIVGTPGRVFDHI-NRGNLKLDACDHAVLDEADEMLNQGFYEEVTRIL 196
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAA 648
+ RQ +LFSAT+ ++++L A
Sbjct: 197 DRLPKTRQVLLFSATVPTDIQNLIA 221
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 120 bits (290), Expect = 4e-26
Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
Frame = +1
Query: 91 MKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDR 270
++AIG + PT IQ+ IP LLG+DV + LP+L++L G R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 271 ITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV--LRQNPDIVIAT 444
TR L+LVPTREL AQV A++ V + LR DIV+AT
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVAT 136
Query: 445 PGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMS 624
PGRL+D + + + + + LVLDEADR+LD F E++ I+ P+RQ + FSAT
Sbjct: 137 PGRLLDLLEHN-ALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLFFSATFP 195
Query: 625 EEVKDLAAVSLKKPVKLFVNS 687
++ LA L P+++ V +
Sbjct: 196 PAIEVLAESMLHDPLRIEVQA 216
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 120 bits (290), Expect = 4e-26
Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 1/213 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E ++ ++ LS +MKAI +V TP+QA IP + KDV + +
Sbjct: 9 NEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGI 68
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQ 402
P++E + ++ + LVL PTREL Q+ R L +F ++ Q
Sbjct: 69 PMVEHIDPESDA----VQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQ 124
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+ L+++P IV+ATPGRL+DH++ + L +E +VLDEADRMLD F + I+ Q
Sbjct: 125 ITTLKKHPQIVVATPGRLMDHMKRR-TVKLDKVETVVLDEADRMLDMGFIHDVTRILDQI 183
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
++ LFSAT+S EV D++ V + PV++ V
Sbjct: 184 KSRKNLGLFSATISREVMDISWVYQRDPVEIVV 216
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 120 bits (290), Expect = 4e-26
Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 3/225 (1%)
Frame = +1
Query: 16 SDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXX 195
SD P P + SF +M L +MK I + P+ IQA +PIAL G+D+
Sbjct: 108 SDSTAAPGPIE---SFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAET 164
Query: 196 XXXXXXXYMLPILERLLYKA--KGGDRITRVLVLVPTRELGAQVHAVTRQLAQ-FXXXXX 366
+ +P+L+ L + + GD LVL PTREL Q+ + ++
Sbjct: 165 GSGKTAAFTIPMLQHCLVQPPIRRGDG-PLALVLAPTRELAQQIEKEVQAFSRSLESLKN 223
Query: 367 XXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY 546
+++ Q S LR +I +ATPGR IDH++ + L I +VLDEADRMLD
Sbjct: 224 CIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNT-SLSRISYVVLDEADRMLDMG 282
Query: 547 FAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
F Q++EI+R K QT+LFSATM E++ LA L PV++ V
Sbjct: 283 FEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKV 327
>UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 754
Score = 120 bits (290), Expect = 4e-26
Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 10/233 (4%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +S +KA+ S +V T +Q AT+ + L GKD ++LP +E
Sbjct: 287 FDECGVSPLTVKALSSAGYVQMTRVQEATLDVCLEGKDALVKAKTGTGKSAAFLLPAIEA 346
Query: 241 LLYKAKGGDRITRV-----LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD-VKYQ 402
+L KA +RI RV L+L PTRE+ +Q+ A + ++ K+
Sbjct: 347 VL-KATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKFD 405
Query: 403 ESVLRQNP-DIVIATPGRLIDHIRNTPSFG--LHSIEVLVLDEADRMLDEYFAEQMKEII 573
+ L +P I++ATPGRL+DHI N SF L +++LVLDEAD +LD F + M++I+
Sbjct: 406 QKRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLLDLGFRKDMEKIV 465
Query: 574 RQCSPK-RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRE 729
C P+ RQ++LFSAT+ +EV+ ++ + LKK FV++ G + A VR+
Sbjct: 466 -DCLPRQRQSLLFSATVPKEVRRISQLVLKKE-HAFVDTVGLGNAETHAKVRQ 516
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 120 bits (290), Expect = 4e-26
Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F +NL + +M+ I N+ +PTPIQ+ +IPI L G D+ +++P L
Sbjct: 86 TFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALM 145
Query: 238 RLLYKAKGGDRITR-VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + K + VLVL PTREL Q V Q D Q + L
Sbjct: 146 HISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKL 205
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R +P+IV ATPGRLID +++ F + LVLDEADRMLD F Q++ II + R
Sbjct: 206 RFHPEIVTATPGRLIDFLQSGV-FNPNRANFLVLDEADRMLDMGFEPQIRAIIASLTKDR 264
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+T +FSAT +E++ LA+ L P+ + V
Sbjct: 265 ETFMFSATWPKEIRQLASDFLSNPIHMHV 293
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 120 bits (290), Expect = 4e-26
Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 5/213 (2%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N +F +++L L+ + F TPIQA T+P+AL G+D+ +++ +
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 232 LERLLYK---AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
+ RLL + R L+L PTREL Q++ + D Q
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQ 127
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+LR+ D+VIATPGRLID+++ L E+ VLDEADRM D F + ++ I+R+
Sbjct: 128 REMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRL 187
Query: 583 SPK--RQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ RQT+LFSAT+S V +LA + +P KL
Sbjct: 188 PERCSRQTLLFSATLSHRVLELAYEYMNEPEKL 220
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 120 bits (289), Expect = 5e-26
Identities = 70/209 (33%), Positives = 108/209 (51%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + +S + + + PTP+Q IP L +DV ++LPILER
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+ + + L++ PTREL Q+ A T++LA+ DV+ Q L+
Sbjct: 65 VNVEKP----TIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKG 120
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+ I+I TPGRL+DH+R + L + +LVLDEAD+ML F +++I+ +RQ
Sbjct: 121 SIHIIIGTPGRLLDHLRRK-TINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQN 179
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
M FSATM +V+ LA +K PV++ V S
Sbjct: 180 MFFSATMPNQVRTLAEQYMKDPVQIQVQS 208
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 120 bits (289), Expect = 5e-26
Identities = 70/206 (33%), Positives = 111/206 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
++ +M LS + A+ + ++ P+PIQAA IP+AL G+DV + +PI+E
Sbjct: 5 NYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIE 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL + R + L+L PTREL QV +L ++ Q L+
Sbjct: 65 RLEHGPNS--RNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLK 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ P IV+ TPGR+ID + + L + +VLDEADRMLD F +++I+R+C +RQ
Sbjct: 123 RAPHIVVGTPGRVID-LMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQ 181
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKL 675
T+L SAT+ ++ LA ++ P K+
Sbjct: 182 TLLLSATVPPTIEKLAQRYMRNPEKV 207
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 120 bits (288), Expect = 7e-26
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS PL++ + L + P+PIQAATIP+ L +DV + LPIL R
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+ K + LVL PTREL QV A R Q S LR
Sbjct: 69 IDIK----QTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALR 124
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ +V+ TPGR+IDH+ S L I+ +VLDEAD ML F + ++ I+++ RQ
Sbjct: 125 RGVHVVVGTPGRVIDHLEKG-SLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQ 183
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXG 696
T LFSATM +K +A L+ P + V + G
Sbjct: 184 TALFSATMPSAIKRIATTYLRDPDLITVAAKTG 216
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 120 bits (288), Expect = 7e-26
Identities = 69/202 (34%), Positives = 109/202 (53%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +NL+ +++A+ + F TPIQ IP+A+ GKD+ + +P++E
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+ +KG + LV+VPTREL QV ++ + D + Q L +
Sbjct: 64 IRPTSKG----VQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEE 119
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
P IV+ TPGRL++H+R I + VLDEAD+MLD F ++ ++I+++ +RQT
Sbjct: 120 LPHIVVGTPGRLLEHMRRE-YVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQT 178
Query: 601 MLFSATMSEEVKDLAAVSLKKP 666
+LFSAT+S V+ LA LK P
Sbjct: 179 LLFSATLSPPVQMLARKYLKDP 200
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 120 bits (288), Expect = 7e-26
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
++ F M L+ L++AI F PTPIQ +IP+ L +DV +++P
Sbjct: 88 KSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIP 147
Query: 229 ILERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
++ERL + A+ G R L++ P+REL Q V ++ + ++ Q
Sbjct: 148 MIERLRAHSARVG---ARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ NPDI+IATPGR + H++ S L SI+ +V DEADR+ + FA Q+ EI+
Sbjct: 205 GFMTTNPDIIIATPGRFL-HLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSLP 263
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP 666
P RQT+LFSAT+ + + A L+ P
Sbjct: 264 PSRQTLLFSATLPRSLVEFARAGLQDP 290
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 119 bits (287), Expect = 9e-26
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L ++K + L + PT IQ +IP+AL KD+ ++LP+++
Sbjct: 10 TFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQ 69
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQ-FXXXXXXXXXXXXDVKYQESVL 414
LL K +R +++ PTREL AQV V ++ + DV Q L
Sbjct: 70 HLL-NVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQL 128
Query: 415 RQNPDIVIATPGRLIDHIRNTPSF--GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
+ P +++ TPGR++ HI+NT + ++ LV+DEAD++L+ FA ++ +I +
Sbjct: 129 AKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEKLPK 188
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+R TMLFSATMS +V+ L SL PVK+
Sbjct: 189 QRTTMLFSATMSTKVEKLQRASLTHPVKI 217
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 119 bits (287), Expect = 9e-26
Identities = 67/200 (33%), Positives = 105/200 (52%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
+ L + KAI F PTPIQ TIP + GKDV +++P+L++L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 250 KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPD 429
+ G R L++ PTREL Q V ++L +F ++ Q S + +NPD
Sbjct: 89 RDTTG---IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
I++ATPGRL+ H+ L ++ +V DEADR+ + F +Q+ E +++ RQT+LF
Sbjct: 146 ILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 610 SATMSEEVKDLAAVSLKKPV 669
SAT+ + + D A L P+
Sbjct: 205 SATLPKMLVDFAKAGLTDPM 224
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 119 bits (287), Expect = 9e-26
Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
+ F +LS L+KA+ + PT IQ IP A+ DV ++LP L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ LL + R+LVL PTREL QV +LAQF + V
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVF 123
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
N D+V+ATPGRL+ +I+ +F S+E+L+ DEADRML F + ++I + ++
Sbjct: 124 NTNQDLVVATPGRLLQYIKE-ENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWRK 182
Query: 595 QTMLFSATMSEE-VKDLAAVSLKKPVKL 675
QT+LFSAT+ E + D A L PVK+
Sbjct: 183 QTLLFSATLEGELLVDFAERLLNDPVKV 210
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 119 bits (287), Expect = 9e-26
Identities = 67/207 (32%), Positives = 106/207 (51%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ SF + LS+ ++ I F PTPIQ TIP+ L +D+ ++LP
Sbjct: 135 KKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILP 194
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
++E+L K+ G R ++L P+REL Q V + A+ ++ Q
Sbjct: 195 MVEKL--KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFG 252
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ NPD++IATPGR + H++ + L S+E +V DEADR+ + F EQ+ E++
Sbjct: 253 MMMTNPDVIIATPGRFL-HLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPT 311
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPV 669
RQT+LFSAT+ + D L PV
Sbjct: 312 TRQTLLFSATLPNSLVDFVKAGLVNPV 338
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 119 bits (286), Expect = 1e-25
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 2/209 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ LS +M+A+ + + P+PIQAATIP L G+DV + LP+L R
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 241 -LLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+L + K +VLVL PTREL QV A R A Q + L
Sbjct: 77 TVLNQVK-----PQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAAL 131
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
++ +++ TPGR+IDH+ + L ++ LVLDEAD ML F E ++E++R+ R
Sbjct: 132 KRGVHVIVGTPGRVIDHLERG-TLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASR 190
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
Q LFSATM +++ +A L+ P+++ +
Sbjct: 191 QVALFSATMPPQIRRIAQTYLQDPIEVTI 219
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 119 bits (286), Expect = 1e-25
Identities = 78/207 (37%), Positives = 107/207 (51%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L +++A+ PTPIQAA +P+AL GKD+ + LPI ER
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L + G R R LVL PTREL QV + +A K +E++LR
Sbjct: 63 LAPSQERG-RKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYG-KQKEALLR- 119
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
D V+ATPGR +D++R L +EV VLDEAD ML F E+++ ++ P RQT
Sbjct: 120 GADAVVATPGRALDYLRQGV-LDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQT 178
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFV 681
+LFSAT+ K LA +K PV + V
Sbjct: 179 LLFSATLPSWAKRLAERYMKNPVLINV 205
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 119 bits (286), Expect = 1e-25
Identities = 69/203 (33%), Positives = 107/203 (52%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + + I L + PTPIQ IP AL G+DV ++LPIL+
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
RL+ +G R+ R +++ PTREL Q+ V L ++ + Q LR
Sbjct: 62 RLMRGPRG--RV-RAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLR 118
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ +I + PGRL+DH+ + L +++L+LDEAD+M D F ++ I+R +RQ
Sbjct: 119 RGVEIAVVCPGRLLDHLERG-TLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQ 177
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
TMLFSATM + ++ LA +L++P
Sbjct: 178 TMLFSATMPDAIRALAREALREP 200
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 119 bits (286), Expect = 1e-25
Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + N +M + + + PTPIQA IP + G DV Y LPI++
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
++L +G R+ R LV+ PTREL Q+ R L Q ++ Q LR
Sbjct: 62 KMLSTPRG--RV-RTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLR 118
Query: 418 QNPDIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
D+V+A PGRL+DHI R T + +E L++DEADRM D F ++ I++
Sbjct: 119 SGVDVVVACPGRLLDHIWRGT--IDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH 176
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
QT+LFSATM EV+ L + PV + V +
Sbjct: 177 QTLLFSATMPPEVRKLTLETQTNPVTVQVGT 207
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 119 bits (286), Expect = 1e-25
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F M L+ L+KAI F PTPIQ TIP+ + +DV +++P
Sbjct: 89 KGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIP 148
Query: 229 ILERLL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
++E+L + K G R L+L P+REL Q V ++L + ++ Q
Sbjct: 149 MIEKLKSHSTKFG---ARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQF 205
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
++ NPDIVIATPGR + H++ + L SI+ +V DEADR+ + FA Q+ EI+
Sbjct: 206 GMMAGNPDIVIATPGRFL-HLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLP 264
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP--VKLFVNSNXGGGLQ 708
RQT+LFSAT+ + + + A L+ P V+L S LQ
Sbjct: 265 STRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESKISPDLQ 307
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 118 bits (285), Expect = 2e-25
Identities = 68/214 (31%), Positives = 107/214 (50%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF NL ++KAI + PTPIQ +IP +L K V ++LPIL+
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L K + R RVL++ PTREL Q+ ++ +++ Q +
Sbjct: 62 KLT-KNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFS 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DI++ATPGRL+D + +EV++LDEADRMLD F +++I S K+Q
Sbjct: 121 KPIDILVATPGRLLD-LYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKKQQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGG 699
++FSAT ++ +A L PV + + + G
Sbjct: 180 MLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSG 213
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 118 bits (285), Expect = 2e-25
Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Frame = +1
Query: 115 FVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP---ILERLLYKAKGGDRITRVL 285
F PTPIQA + PIAL +D+ Y++P +L+RL + ++ G VL
Sbjct: 251 FSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPT---VL 307
Query: 286 VLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDH 465
VL PTREL Q+ ++ + Q L + DIV+ATPGRL D
Sbjct: 308 VLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLND- 366
Query: 466 IRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLA 645
I LH + LVLDEADRMLD F Q+++I++Q PKRQT++F+AT +EV+ +A
Sbjct: 367 ILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIA 426
Query: 646 AVSLKKPVKLFVNS 687
+ L PV++ + +
Sbjct: 427 SDLLSNPVQVNIGN 440
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 118 bits (285), Expect = 2e-25
Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
L K I + PTPIQA+ PI + G D+ Y+LP L + + K G
Sbjct: 82 LNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQTGSGKTIAYLLPGLVHIESQRKKGG 141
Query: 268 RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
+ +L+LVPTREL Q+ ++ D + QE L ++PDIV+ATP
Sbjct: 142 PM--MLILVPTRELAMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATP 199
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRLID + + LH++ LVLDEADRMLD F +Q+++I RQT+ FSAT +
Sbjct: 200 GRLIDFL-DAQVTNLHNVTYLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPK 258
Query: 628 EVKDLAA-VSLKKPVKLFVNS 687
V++LA + +P+ L++ S
Sbjct: 259 TVQNLACDLCHNEPINLYIGS 279
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 118 bits (284), Expect = 2e-25
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +++ L+ AI + + TPIQ +IP L GKD+ +++P++
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIHN 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESVLR 417
+L K G LVL PTREL Q+ ++L + D K Q L
Sbjct: 63 ILTKGIQG---IAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLE 119
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
I++ATPGRLID I++ S + ++E VLDEADRMLD F + ++ ++ +C ++Q
Sbjct: 120 GLNGIIVATPGRLIDMIKSG-SIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
T+L+SAT+S EV LA L +PV++ +N
Sbjct: 179 TLLYSATLSVEVMRLAYRFLNEPVEIQIN 207
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 118 bits (284), Expect = 2e-25
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 1/204 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ L + + L + TP+QAAT+P L G DV + + +L+
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE-SVL 414
R++ D T+ LVL PTREL QV R+LA+F Q+ L
Sbjct: 65 RIVVS----DFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL 120
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
P IV+ TPGR+ DH+R S L S++VLVLDEADRMLD F + + ++I R
Sbjct: 121 VHAPHIVVGTPGRIQDHLRKQ-SLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDR 179
Query: 595 QTMLFSATMSEEVKDLAAVSLKKP 666
QT+LFSAT +E++ ++A ++P
Sbjct: 180 QTLLFSATYPQEIEQISARVQRQP 203
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 118 bits (284), Expect = 2e-25
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Frame = +1
Query: 43 YDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
+ + F ++ + P+++AI + PTPIQA IP+ L G D+ +
Sbjct: 78 HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFA 137
Query: 223 LPILERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+P+L+ L K R R L++ PTREL Q+ + + +
Sbjct: 138 IPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNP 197
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q + L++ DI+IATPGRL+D + N L +IE VLDEADRMLD F +++I+ +
Sbjct: 198 QTASLQKGIDILIATPGRLLD-LMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAE 256
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
K+Q++ FSATM E+ LAA L PV++ V
Sbjct: 257 LPKKKQSLFFSATMPPEITRLAASILHNPVEVSV 290
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 118 bits (284), Expect = 2e-25
Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
+E PP + F ++ L + I F + TPIQA T+P L G+D+
Sbjct: 116 KEVPPAEGKTRFLDLPLHEDVQFGIQHAGFEYCTPIQALTLPALLEGRDLAGKAQTGTGK 175
Query: 208 XXXYMLPILERLLYKAKGGDR--ITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXX 381
++L + RLL + R LVL PTREL Q+ L F
Sbjct: 176 TAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFG 235
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
D + Q L Q D+VI TPGR+ID+ R S L +EVLV+DEADRMLD F +
Sbjct: 236 GMDHEKQRRSLEQPVDLVIGTPGRIIDYSRG-GSLKLSKVEVLVIDEADRMLDMGFIPDV 294
Query: 562 KEIIRQCSPK--RQTMLFSATMSEEVKDLAAVSLKKPV 669
K I+ Q K RQT+LFSAT+ + + LA+ L +PV
Sbjct: 295 KRIVSQLPRKGERQTLLFSATLEDHILRLASGWLAEPV 332
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 118 bits (284), Expect = 2e-25
Identities = 77/209 (36%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L P+ KA+ N+ PTPIQA TIP AL G+DV LPIL
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 238 RLLYKA-KGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+L + K LVL PTREL Q+ + Q L
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
++ I++ATPGRL+D + N L+ +EV VLDEADRMLD F +K II Q +R
Sbjct: 123 KRGAHILVATPGRLLD-LMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQR 181
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
Q++ FSAT++ ++ +LA L KPV + V
Sbjct: 182 QSLFFSATLAPKITELAHSLLSKPVTVNV 210
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 118 bits (284), Expect = 2e-25
Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E +F +S L++AIG + F PTPIQA IP L GKDV + +
Sbjct: 2 EETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGI 61
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD-VKYQ 402
PI+ERL ++ + LVL PTREL Q +L ++ ++ Q
Sbjct: 62 PIIERL----DPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQ 117
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L+ +VI TPGR+IDHI+ + L S+ + +LDEAD+MLD F E +++I R
Sbjct: 118 LRALKGTVQVVIGTPGRVIDHIKRG-TLHLDSVTMFILDEADQMLDMGFREDIEDIFRDT 176
Query: 583 SPKRQTMLFSATMSEEVKDL 642
RQT+LFSATM + + D+
Sbjct: 177 PKDRQTILFSATMPQPILDI 196
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 118 bits (284), Expect = 2e-25
Identities = 68/210 (32%), Positives = 110/210 (52%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + LS L++++ S+ F TPIQA TIP AL GKD+ + LP+L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
K + +V+ PTREL QV ++ + D+ Q L+
Sbjct: 63 ----KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
++P I++ TPGR++DHI N + L ++E +VLDEAD ML+ F E ++ I+ Q
Sbjct: 119 KHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
T+LFSATM + ++ +A + +P + V +
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKA 207
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 118 bits (283), Expect = 3e-25
Identities = 71/207 (34%), Positives = 105/207 (50%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N F ++ L L+KAI + F P+ IQA +IP+AL G D+ + I
Sbjct: 3 NIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAI 62
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
+ + K + + L+L PTREL QV+ +L + + Q
Sbjct: 63 INNADFSGK--KKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRA 120
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L+ DIV+ TPGR++D IR S L+ I LVLDEAD ML+ F + ++EI++
Sbjct: 121 LKNGVDIVVGTPGRVLDLIRRK-SLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTD 179
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVK 672
RQT+LFSATM ++K LA +K+ K
Sbjct: 180 RQTLLFSATMPPQIKKLARNYMKEDTK 206
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 118 bits (283), Expect = 3e-25
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Frame = +1
Query: 37 PPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXX 216
P +E F++ + PLM I L F + TPIQ ++ L GKD+
Sbjct: 88 PELEEKKRFHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAV 147
Query: 217 YMLPILERLLYKAKGG--DRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
+++ ++ RLL KGG R R L+L PTREL Q+ ++L ++ +
Sbjct: 148 FLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAE 207
Query: 391 VKYQESVLRQNP-DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
+ Q +L++ DIV+ATPGRLID N + + LV+DEADRMLD F ++
Sbjct: 208 YEKQMELLKRGKTDIVVATPGRLID-FHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRR 266
Query: 568 IIRQCSPK--RQTMLFSATMSEEVKDLAA 648
I+ K RQT++FSAT+S +V +L+A
Sbjct: 267 IVSWMPKKRDRQTLMFSATISSDVNNLSA 295
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 118 bits (283), Expect = 3e-25
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + +M +I L + PT IQ +PIAL G+D+ ++ P L
Sbjct: 107 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 166
Query: 238 RLLYKAK--GGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++ + + GD VL+ PTREL Q++ R+ + + Q
Sbjct: 167 HIMDQPELQVGDGPI-VLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 225
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L++ +IV+ATPGRLIDH++ + LH + LV DEADRM D F Q++ I P
Sbjct: 226 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPD 284
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+LFSAT ++V+ L L PV++ +
Sbjct: 285 RQTLLFSATFKKKVEHLCRDILVDPVRVVI 314
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 118 bits (283), Expect = 3e-25
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F M L+ L+KAI F PTPIQ +P+ L G DV +++P
Sbjct: 76 KGGGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIP 135
Query: 229 ILERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
++ERL + AK G R +++ P+REL Q V ++ + ++ Q
Sbjct: 136 MIERLKTHSAKVG---ARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQF 192
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ + NPDI+IATPGR + H++ L S++ +V DEADR+ + FA Q+ EI+
Sbjct: 193 NSMTTNPDIIIATPGRFL-HLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALP 251
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP 666
RQT+LFSAT+ + + + A L++P
Sbjct: 252 TSRQTLLFSATLPKSLVEFARAGLQEP 278
>UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 926
Score = 117 bits (282), Expect = 4e-25
Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 1/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ +S + + F+ T IQ TIP L G+DV Y++P++E
Sbjct: 84 NFSDLPISYNTIFGLEKRKFIKMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLVPLVE 143
Query: 238 RL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
RL + K D + +++L PTREL QV V Q +VKY++ +
Sbjct: 144 RLYVQKWNPLDGLGAIIIL-PTRELATQVFEVFNSFTQNHDLSVGLIIGGKNVKYEKEHM 202
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+ +++I TPGRL+ H+ TP F ++++LV+DEAD +LD F E + I+ R
Sbjct: 203 K-GMNVLICTPGRLLQHMDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAILLNLPKSR 261
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
QT+LFSAT+S+ + +L+ +SLK +F++
Sbjct: 262 QTILFSATLSKSIHELSKLSLKNAEHIFLH 291
>UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 624
Score = 117 bits (282), Expect = 4e-25
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Frame = +1
Query: 43 YDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
Y + F +S+ ++ + F+ TPIQ A IP AL G+D+ ++
Sbjct: 85 YPDAKRFDQFPISKATIQLLNKNRFITMTPIQRAAIPHALAGRDIIGAARTGSGKTLAFL 144
Query: 223 LPILERLLYKAKGGDRITR-VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+P++E +Y+++ + ++L PTREL Q+ V +A D K
Sbjct: 145 IPLIE-FMYRSRWTELDGLCAIILSPTRELAQQIFDVFASIAG-ERFTAALITGGKDTKE 202
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
+ V+R +++I TPGRL+ H+ NTP F + +L+LDEADR+LD F + + I+
Sbjct: 203 EAKVIRLM-NVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEH 261
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+RQTMLFSAT ++ V+DL +SL+ P + V+
Sbjct: 262 LPKQRQTMLFSATQTKSVQDLIRLSLRHPEYISVD 296
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 117 bits (282), Expect = 4e-25
Identities = 68/210 (32%), Positives = 108/210 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF N LS+ + +A+ L + HPT +Q IP+AL KD+ + +P+ E
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+ ++ + + LVL PTREL QV + +F Q+ L+
Sbjct: 65 MVEWE----ENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
Q IV+ TPGR++DHI + L ++ LV+DEAD ML+ F +Q++ II + KR
Sbjct: 121 QKTHIVVGTPGRVLDHIEKG-TLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRM 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
TMLFSAT+ E+V+ L+ + P + + +
Sbjct: 180 TMLFSATLPEDVERLSRTYMNAPTHIEIKA 209
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 117 bits (282), Expect = 4e-25
Identities = 64/194 (32%), Positives = 104/194 (53%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L PL+KA+ L F PTPIQ IP+ L G ++ Y+LP+L+R
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+ K +VL++ PTREL QV +L ++ ++ Q LRQ
Sbjct: 64 IQRGKK-----AQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQ 118
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
++++ TPGR++DHI +F I++++LDEAD MLD F + ++ I+ + ++QT
Sbjct: 119 GVEVIVGTPGRILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQT 177
Query: 601 MLFSATMSEEVKDL 642
+LFSAT+ +K +
Sbjct: 178 LLFSATLPAPIKTI 191
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 117 bits (281), Expect = 5e-25
Identities = 72/209 (34%), Positives = 105/209 (50%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF N+ LS ++ A+ + + PTPIQ IP L KDV ++LP+L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L K + R+ R L+L PTREL AQV + Q++ L
Sbjct: 62 -ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLT 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ D++IATPGRL+DH L +E+LV+DEADRMLD F ++ I + RQ
Sbjct: 121 RGVDVLIATPGRLLDHTERGGLL-LTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
T+ F+ATM E++ + L P K+ V+
Sbjct: 180 TLFFTATMPPEIRRITETFLHNPQKVEVS 208
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 117 bits (281), Expect = 5e-25
Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ L L+KAI L F P+PIQ+ IP L G+DV + LP+L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
R+ DR + LVL PTREL QV + +T ++ Q S L
Sbjct: 66 RI----DAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASAL 121
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R+ +V+ TPGR++DHI N + L + + VLDEAD MLD F E ++ I+ +
Sbjct: 122 RRGAQVVVGTPGRILDHI-NRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWV 180
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
Q+ FSATM + + +LA L++P L V
Sbjct: 181 QSAFFSATMPDGILELARRFLREPELLRV 209
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 117 bits (281), Expect = 5e-25
Identities = 77/211 (36%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F N M+AI FV PTPIQ+ P+AL G+D+ Y+LP L
Sbjct: 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVH 312
Query: 241 L--LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + + GD VL+L PTREL Q+ + + + Q L
Sbjct: 313 VGAQPRLEQGDGPI-VLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDL 371
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R+ +IVIATPGRLID + + L + LVLDEADRMLD F Q+++I+ Q P R
Sbjct: 372 RRGVEIVIATPGRLIDMLEGGHT-NLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDR 430
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
QT+ +SAT EV+ LA L+ P K+ + S
Sbjct: 431 QTLYWSATWPREVESLARQFLQNPYKVIIGS 461
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 116 bits (280), Expect = 6e-25
Identities = 81/226 (35%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Frame = +1
Query: 10 YDSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXX 189
+D D F+ P + F++++L P+++ I F + TPIQAA +P L G D
Sbjct: 102 WDIDQFQVDPE-EGKTRFHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRA 160
Query: 190 XXXXXXXXXYMLPILERLLYK-AKGGDR--ITRVLVLVPTRELGAQVHAVTRQLAQFXXX 360
+++ +L + L A G R R LVL PTREL Q+ T L++
Sbjct: 161 QTGTGKTAVFIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPF 220
Query: 361 XXXXXXXXXDVKYQESVLRQNP-DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 537
D + Q+ L DIV+ATPGRL+D R L +E+LV+DEADRML
Sbjct: 221 KSVAIFGGMDYEKQKRRLTGEVIDIVVATPGRLLDFKRQG-DLHLSKVEILVIDEADRML 279
Query: 538 DEYFAEQMKEIIRQCSPK--RQTMLFSATMSEEVKDLAAVSLKKPV 669
D F ++ II PK RQTMLFSAT++ EV A+ + PV
Sbjct: 280 DMGFIPDVQRIIHYTPPKAQRQTMLFSATLTAEVTRFASQWTRNPV 325
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 116 bits (280), Expect = 6e-25
Identities = 67/207 (32%), Positives = 107/207 (51%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E +SF + LS+ + + + PT IQ +I AL GKD+ +++
Sbjct: 59 EETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLI 118
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+ E+L L++ PTREL Q+ ++ + ++K ++
Sbjct: 119 PVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLIIGGQNLKAEK 178
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ L Q +I+I TPGRL+ H+ P F ++++LVLDEADR LD F M II
Sbjct: 179 NRLHQL-NIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLDLGFESAMNAIIENLP 237
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP 666
+RQT+LFSAT ++ VKDLA ++L+ P
Sbjct: 238 SERQTLLFSATQTKSVKDLARLNLRNP 264
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 116 bits (280), Expect = 6e-25
Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L P+++A+ L + P+PIQA IP L G+DV + LP+L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
L + K ++LVL PTREL QV A+T Q L
Sbjct: 67 NLDPELKA----PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
RQ P IV+ TPGRL+DH++ + L + LVLDEAD ML F E ++ I+ Q
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRG-TLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH 181
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
QT LFSATM E ++ + +K+P ++ + S+
Sbjct: 182 QTALFSATMPEAIRRITRRFMKEPQEVRIQSS 213
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 116 bits (279), Expect = 8e-25
Identities = 72/199 (36%), Positives = 102/199 (51%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
M++S L K++G + F PT IQ IP+ L GKDV Y+LP+L +
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSV-E 59
Query: 250 KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPD 429
K KG + + ++++PTREL Q H V +L + + Q L D
Sbjct: 60 KLKG--KSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEEL-PGSD 116
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
IVI TPGR++D + N L ++ LVLDEAD MLD F + +K+II RQT+L
Sbjct: 117 IVIGTPGRILD-LYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILL 175
Query: 610 SATMSEEVKDLAAVSLKKP 666
SAT+ EVK +A + P
Sbjct: 176 SATLPAEVKTIANHFMNNP 194
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 116 bits (279), Expect = 8e-25
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++S + +A+ + F TPIQA T+P+ L G DV + +P+LE
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L +R+ + L++ PTREL QV +++ ++ + Q + LR+
Sbjct: 66 L-----EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRR 120
Query: 421 NPDIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+++ATPGRLIDHI R T G I +VLDEAD ML+ F + ++ I+ +RQ
Sbjct: 121 GVHVIVATPGRLIDHIERGTVDLG--GISTVVLDEADEMLNMGFIDDIERILSHVPERRQ 178
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
TMLFSAT+S+ + +A ++ P
Sbjct: 179 TMLFSATVSKPILRIARKYMRNP 201
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 116 bits (279), Expect = 8e-25
Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)
Frame = +1
Query: 43 YDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYM 222
Y F LS +KAI F T +Q AT+PI L GKDV ++
Sbjct: 378 YLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFL 437
Query: 223 LPILERLLYKAKGGDRITR-----VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX 387
LP +E ++ K+ R +R VLV+ PTREL +Q A L ++
Sbjct: 438 LPAIEAVI-KSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGG 496
Query: 388 D-VKYQESVLRQNP-DIVIATPGRLIDHIRNTPSFG--LHSIEVLVLDEADRMLDEYFAE 555
+ ++ ++ NP I++ATPGRL DHI NT F L ++VLVLDEAD +LD F
Sbjct: 497 TKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRR 556
Query: 556 QMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
++ II +RQT LFSAT+ EEV+ + V+LK+ + F+N
Sbjct: 557 DIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHE-FIN 598
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 116 bits (278), Expect = 1e-24
Identities = 69/214 (32%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+ F ++ L L+K + NF T IQ IP+ + G+D+ ++L
Sbjct: 2 ESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVL 61
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQE 405
P+L + L + R L+LVPTREL QV+ R + + Q
Sbjct: 62 PMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQV 121
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
L + P ++ATPGRL DH+ + F L +E LVLDEADRMLD FA++++ I
Sbjct: 122 KALARGPRFIVATPGRLADHLDHRSLF-LEGLETLVLDEADRMLDLGFAKELRRIHNAAK 180
Query: 586 -PKRQTMLFSATMSE-EVKDLAAVSLKKPVKLFV 681
+RQT++FSAT+ +V D+A L +P ++ +
Sbjct: 181 HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAI 214
>UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=8; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio vulnificus
Length = 447
Score = 116 bits (278), Expect = 1e-24
Identities = 71/209 (33%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L L+K + L+F T IQ IP+A+ GKD+ ++LP+L +
Sbjct: 7 FKDLGLDNRLLKNLKHLDFQKATKIQQQAIPVAIAGKDLLASSKTGSGKTLAFVLPMLHK 66
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L R R ++L PTREL QV+ R + + Q L +
Sbjct: 67 SLKTKALSARDPRGVILAPTRELAKQVYGELRTMLGGLSYDATLIVGGENFNDQVKALAR 126
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS-PKRQ 597
P ++ATPGRL DH+ + F L +E LVLDEADRMLD FA +++ I +RQ
Sbjct: 127 YPKFIVATPGRLADHLEHKSVF-LEGLETLVLDEADRMLDLGFAPELRRIHNAAKHRRRQ 185
Query: 598 TMLFSATMSE-EVKDLAAVSLKKPVKLFV 681
T++FSAT+ EV D+A+ L P ++ +
Sbjct: 186 TLMFSATLDHAEVNDIASEMLDAPKRIAI 214
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 116 bits (278), Expect = 1e-24
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F ++ L+ L++A+ +V PTPIQA +IP+ L G+D+ + LP+L
Sbjct: 8 AFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLH 67
Query: 238 RLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
RL + + RVLVL PTREL +Q+ ++ +Q L
Sbjct: 68 RLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKAL 127
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+ DI++A PGRL+D I L +E LVLDEAD+MLD FA+ ++ I+ R
Sbjct: 128 EEGVDIIVAAPGRLLDLIEQGLC-DLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDR 186
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKL 675
T+LFSATM + + L L+ P K+
Sbjct: 187 HTVLFSATMPKSIAALVESLLRNPAKV 213
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 116 bits (278), Expect = 1e-24
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+ + F S L+K + + P+PIQ A P +LG+D+ + L
Sbjct: 68 EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFAL 127
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
P+LERL + G + +VLVL PTREL QV + A D + Q
Sbjct: 128 PLLERL----ESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQ 183
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
S LR+ D+V+ TPGR++DH+R + + LVLDEAD ML F + ++ I+ Q
Sbjct: 184 ISTLRRGVDVVVGTPGRVMDHMRQG-TLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQL 242
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGG 702
+RQ +LFSATM E++ L+ L P ++ + + G
Sbjct: 243 PKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDG 282
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 116 bits (278), Expect = 1e-24
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 5/214 (2%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E F +M L L++A+ L + PT IQ IP+AL GKD+ Y +P
Sbjct: 5 EALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIP 64
Query: 229 ILERLLYKAKGG---DRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX--DV 393
+L+ LL++ G ++ R LVLVPT+EL Q ++ +QLA + D
Sbjct: 65 MLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAEDS 124
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q +VL + PD+V+ TP R++ H++ S+E+LV+DEAD + F E++K ++
Sbjct: 125 VSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFGFEEELKSLL 184
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
Q L SAT +E+V+ L + L PV L
Sbjct: 185 CHLPRIYQAFLMSATFNEDVQALKELILHNPVTL 218
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 116 bits (278), Expect = 1e-24
Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 2/204 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L + + +F T +Q A IP+AL G+D+ +++P+LE+
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 241 LLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ-ESVL 414
L Y AK + L++ PTREL Q+ V R++ + +K + E +
Sbjct: 115 L-YHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHFFSAGLVIGGKSLKEEAERLG 173
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R N I++ TPGR++ H+ T +F ++++++LVLDEADR++D F + ++ R
Sbjct: 174 RMN--ILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTR 231
Query: 595 QTMLFSATMSEEVKDLAAVSLKKP 666
QT+LFSAT S+ V DLA +SLK+P
Sbjct: 232 QTLLFSATQSKRVSDLARLSLKEP 255
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 115 bits (277), Expect = 1e-24
Identities = 72/197 (36%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + L ++K++ + + + TP+Q IP AL G D+ ++LP ++
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQ 61
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLA-QFXXXXXXXXXXXXDVKYQESVL 414
RLL + RVLVL PTREL QV + Q L
Sbjct: 62 RLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRL 121
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
Q D+V+ATPGRLIDH+ +EVLVLDEADRMLD F + +K I +C +R
Sbjct: 122 SQPVDVVVATPGRLIDHLERG-KIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPAER 180
Query: 595 QTMLFSATMSEEVKDLA 645
QT+LFSAT+ V +LA
Sbjct: 181 QTLLFSATLDGVVGNLA 197
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 115 bits (277), Expect = 1e-24
Identities = 74/219 (33%), Positives = 107/219 (48%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
+P +F +M LS L + + + F++PTP+Q IP AL G+D+
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 211 XXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
+++P LE L G +VL+LVPTREL QVH V QL
Sbjct: 79 LAFIIPALEMLRDTEPCG---VQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTS 135
Query: 391 VKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI 570
+ Q +R +V+ATPGRL D++ L +E+LVLDEADRM+D F +K I
Sbjct: 136 ERNQIQSIRSGARVVVATPGRLEDYMGRR-LVDLSQVEMLVLDEADRMMDMGFLPAIKRI 194
Query: 571 IRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+R +QT+ FSATM V + L V++ + S
Sbjct: 195 LRALPRDKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGS 233
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 115 bits (277), Expect = 1e-24
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + + + +++AI + + TP+Q IP G+DV + LPIL++
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 241 LLYKAKGGDRIT-RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+ + R L+L PTREL AQV ++ + Q L+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
Q DI++ATPGRL++HI + L ++E LVLDEADRMLD F+ +++I++ + KRQ
Sbjct: 123 QGADIIVATPGRLLEHIVAC-NLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQ 181
Query: 598 TMLFSATMSEEVKDLAAVSLKKP 666
+LFSAT S VK LA L KP
Sbjct: 182 NLLFSATFSTAVKKLANDMLDKP 204
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 115 bits (277), Expect = 1e-24
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIAL-LGKDVXXXXXXXXXXXXXYMLPILE 237
F + LS ++ AI + PT IQ +P AL KD+ + +P+LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
R+ +KA ++ + +++ PTREL Q+ + L ++ Q L
Sbjct: 80 RIDFKA---NKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLE 136
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ DIV+ TPGR+IDH+ N + L +E LVLDEADRMLD F + + EII++ ++
Sbjct: 137 KGVDIVVGTPGRIIDHL-NRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKR 195
Query: 598 TMLFSATMSEEVKDLAAVSLKK 663
T LFSATM +E+ D+A +K+
Sbjct: 196 TFLFSATMPKEIVDIARKFMKE 217
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 115 bits (277), Expect = 1e-24
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++NL L +AI ++ F + TPIQA T+P L +D+ +++ ++
Sbjct: 44 FSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQT 103
Query: 241 LLYKA-KGGDRIT---RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+L + R RVL L PTREL Q+ QL Q
Sbjct: 104 MLETPIEDSKRFASEPRVLALAPTRELAMQIAKDAEQLCAHTGHKVVTVVGGMHYDKQRD 163
Query: 409 VLRQNP-DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
L+ DI++ATPGRLID + + F L I++L+LDEADRMLD F +K IIR+C+
Sbjct: 164 QLQNEVVDILVATPGRLIDFLGSQDVF-LDQIDILILDEADRMLDMGFIPDVKRIIRKCT 222
Query: 586 PK--RQTMLFSATMSEEVKDLAAV 651
PK RQT+LFSAT +++V +LA++
Sbjct: 223 PKEDRQTLLFSATFNQDVLNLASM 246
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 115 bits (277), Expect = 1e-24
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Frame = +1
Query: 25 FEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXX 204
F E P A+F ++ + +++AIG + + PT IQAATIP + G DV
Sbjct: 3 FPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTG 62
Query: 205 XXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXX 381
+ +P+L ++ +K + + LVLVPTREL QV A R A
Sbjct: 63 KTAAFAIPMLSKIDITSK----VPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYG 118
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
Q + LR+ +V+ TPGR+IDH+ + L ++ LVLDEAD ML FA+ +
Sbjct: 119 GSSYAVQLAGLRRGAQVVVGTPGRMIDHLERA-TLDLSRVDFLVLDEADEMLTMGFADDV 177
Query: 562 KEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ I+ + +Q LFSATM ++ L+A L P ++
Sbjct: 178 ERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEV 215
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 115 bits (276), Expect = 2e-24
Identities = 67/193 (34%), Positives = 101/193 (52%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
++K I F P+P+Q+ +IPI L GKD+ + +PIL L +
Sbjct: 56 VLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTL-----NRN 110
Query: 268 RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
+ L++ PTREL Q+ +L +F +K Q +L + P +IATP
Sbjct: 111 KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKAMIATP 170
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRL+DH++N S +++VLDE+D MLD F + ++EI + RQT+LFSATM E
Sbjct: 171 GRLLDHLQNG-RIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSATMPE 229
Query: 628 EVKDLAAVSLKKP 666
+K LA L +P
Sbjct: 230 PIKALAMKILNEP 242
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 115 bits (276), Expect = 2e-24
Identities = 69/204 (33%), Positives = 105/204 (51%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F MNL+ L+ A+ + PTP+Q+ IP +L G D+ + L +L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L K + R L+LVP+RE+ Q++ V +L Q + L+
Sbjct: 94 TLQKKPEA-----RGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLK 148
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+NP ++IATPGR+ DH+ L ++EV+VLDEADRMLD FA Q++ I RQ
Sbjct: 149 KNPRLIIATPGRMNDHLSGNKLL-LQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQ 207
Query: 598 TMLFSATMSEEVKDLAAVSLKKPV 669
TM+FSA+ V+ +A + +K V
Sbjct: 208 TMMFSASFGSNVESIAQLFMKPDV 231
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 115 bits (276), Expect = 2e-24
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 2/202 (0%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA--KG 261
L+K + + NF PTP+QA + P+ L G+D+ +M+P L + + +
Sbjct: 113 LLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRS 172
Query: 262 GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIA 441
GD V+VL PTREL Q+ T+++ Q +LR+ I++A
Sbjct: 173 GDG-PMVVVLAPTRELAQQIEEETKKVIPGDVYCGCVYGGAPKGP-QLGLLRRGVHILVA 230
Query: 442 TPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATM 621
TPGRLID + + LH + LVLDEADRMLD F Q+++I Q P RQT++FSAT
Sbjct: 231 TPGRLIDFL-DIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATW 289
Query: 622 SEEVKDLAAVSLKKPVKLFVNS 687
E++ LAA K+ +++ V S
Sbjct: 290 PREIQRLAAEFQKQWIRISVGS 311
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 114 bits (275), Expect = 3e-24
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 6/215 (2%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P + F++ NL +M++I L F + +PIQA +P L G+D+ +
Sbjct: 93 PAEGKVRFHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAF 152
Query: 220 MLPILERLLYKAKGGDRIT---RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
++ +L++LL K +R R L+L PTREL Q+ L+++ D
Sbjct: 153 LITVLQKLL-TVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVD 211
Query: 391 V-KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
K +E + + D+V+ATPGRL+D+++ + L +E+LV+DEADRMLD F +K
Sbjct: 212 YDKQKEQLENEVVDVVVATPGRLLDYLQQGIVY-LDQVEMLVIDEADRMLDMGFIPDLKR 270
Query: 568 IIRQCSPK--RQTMLFSATMSEEVKDLAAVSLKKP 666
IIR K RQT LFSAT +V L+ KP
Sbjct: 271 IIRGTPEKSIRQTQLFSATYPYDVVALSESWTYKP 305
>UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_54,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 696
Score = 114 bits (275), Expect = 3e-24
Identities = 63/208 (30%), Positives = 107/208 (51%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ +S ++A+ F+ T IQ IP AL +D+ Y+LP++E
Sbjct: 58 FEDLPISTNTLRALKQRKFIKMTEIQRCVIPHALAERDILGASKTGSGKTLSYLLPLIEN 117
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L L+++PTREL QV V + L + + +Y+ +
Sbjct: 118 LYVNKWTPLDGLGALIILPTRELAMQVFEVFKSLNTYHILSMALLIGGKNYQYERDRIT- 176
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+++I TPGRL+ H +P F ++++VLVLDEAD ML+ F +K I+ ++QT
Sbjct: 177 GMNVIICTPGRLLQHFEESPGFDANNLKVLVLDEADMMLELGFWGPLKAIMNYLPKEKQT 236
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVN 684
MLFSAT+++ + L +SL+ P +F++
Sbjct: 237 MLFSATLNQTIHQLCKISLQNPESIFLH 264
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 114 bits (275), Expect = 3e-24
Identities = 67/202 (33%), Positives = 100/202 (49%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ + L+K PT +Q IP L G DV ++LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
LL K +R LV+ PTREL +Q+ A + Q + Q + L +
Sbjct: 63 LLQK----NRSFYCLVVAPTRELSSQI-AECFNMFQATGLRVCLLVGGANFNVQANQLSK 117
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
P +V+ TPGR+ +H+ T SF + VLDEADR ++ F E ++ II KRQT
Sbjct: 118 RPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETIIPSLREKRQT 177
Query: 601 MLFSATMSEEVKDLAAVSLKKP 666
+LF+ATMS+E+ L++ LK+P
Sbjct: 178 LLFTATMSDEISKLSSSILKRP 199
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 114 bits (275), Expect = 3e-24
Identities = 74/208 (35%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P + F++ LS LM AI L F + TPIQA + L G+D +
Sbjct: 4 PQEGKTRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAF 63
Query: 220 MLPILERLLYKAKGGDRIT---RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
++ I+ +L +R R L++ PTREL Q+ L ++ D
Sbjct: 64 LISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMD 123
Query: 391 VKYQESVLR-QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
Q L ++ DI++ATPGRL+D L +EV+VLDEADRMLD F Q+++
Sbjct: 124 FDKQLKALEARHCDILVATPGRLLD-FNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQ 182
Query: 568 IIRQCSPK--RQTMLFSATMSEEVKDLA 645
IIRQ PK RQT+LFSAT +++V +LA
Sbjct: 183 IIRQTPPKSERQTLLFSATFTDDVMNLA 210
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 114 bits (275), Expect = 3e-24
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P +SF + LM I + PTPIQ +P+AL G+D+ +
Sbjct: 248 PPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAF 307
Query: 220 MLPILERLL--YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
+ P+L ++ + + GD V+V PTREL Q+HA ++ + +
Sbjct: 308 IWPMLIHIMDQKELEPGDGPIAVIVC-PTRELCQQIHAECKRFGKAYNLRSVAVYGGGSM 366
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q L++ +IV+ TPGRLIDH++ + L + LV DEADRM D F Q++ I
Sbjct: 367 WEQAKALQEGAEIVVCTPGRLIDHVKKKAT-NLQRVSYLVFDEADRMFDMGFEYQVRSIA 425
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
P RQT+LFSAT ++++ LA L P+++
Sbjct: 426 SHVRPDRQTLLFSATFRKKIEKLARDILIDPIRV 459
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 114 bits (274), Expect = 3e-24
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SFY M L L +A+ +F PTP+QA IP+AL GKD+ + +P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+LL G + LV+VPTREL QV + + + L + + Q + L
Sbjct: 63 KLL----GEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQL 118
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
++ P IVI TPGR+IDHI + +++ LVLDE DRM D F Q++ I++ R
Sbjct: 119 QRRPRIVIGTPGRIIDHIER-KTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMR 177
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
Q ++FSAT+ ++ LA +P ++ V +
Sbjct: 178 QNLMFSATLPGDIVKLAEKYSNQPERVSVEN 208
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 114 bits (274), Expect = 3e-24
Identities = 69/205 (33%), Positives = 104/205 (50%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
++F + LS L+K+I LNF PT +Q IP L KD+ + +PI
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + + + + LVLVPTREL QV + +F +QE L
Sbjct: 64 QLVDWD----ENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKEL 119
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+Q +V+ TPGR+IDH+ +F I+ LV+DEAD M + F +Q++ II+ S KR
Sbjct: 120 KQKTHVVVGTPGRIIDHMEKG-TFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKR 178
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPV 669
TML SATM ++ L+ +K P+
Sbjct: 179 VTMLLSATMPSAIETLSNRYMKDPI 203
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 114 bits (274), Expect = 3e-24
Identities = 76/215 (35%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P + + F ++ L L + + SL + TPIQA TIP+ L G+DV +
Sbjct: 4 PDTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAF 63
Query: 220 MLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQ-FXXXXXXXXXXXXDVK 396
LPIL + K R + LVL PTREL QV R + D++
Sbjct: 64 ALPILANIDVKV----RSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMR 119
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
Q LR+ IV+ATPGRL+DHI S L I +VLDEAD ML F + + I+
Sbjct: 120 QQLKSLREGTHIVVATPGRLLDHIERR-SIDLTGINAVVLDEADEMLRMGFIDDVDTILA 178
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+ +R+ LFSATM + V+D+A L P ++ V
Sbjct: 179 KTPKERKVALFSATMPKRVRDIANKHLSNPAEISV 213
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 114 bits (274), Expect = 3e-24
Identities = 68/210 (32%), Positives = 101/210 (48%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS ++ + ++ PT IQ TI +L G DV ++P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L D L++ PTREL Q + + DV ++ + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI-S 196
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I++ TPGRL+ H+ S++VLVLDEADRMLD F++Q+ II +RQT
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
+LFSAT + VKDL V PV + V+ N
Sbjct: 257 LLFSATQTRNVKDLCRVCTNDPVFVSVHEN 286
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 113 bits (273), Expect = 4e-24
Identities = 75/215 (34%), Positives = 108/215 (50%), Gaps = 5/215 (2%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI-- 231
+F +NL + K I + PTPIQ+ +IP+AL G D+ +++P
Sbjct: 126 TFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAMV 185
Query: 232 ---LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
L+ +Y+ G VLVL PTREL Q+ V + Q
Sbjct: 186 HIGLQEPMYRGDG----PIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQ 241
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+ LR P +V+ATPGRLID I ++ + LVLDEAD+MLD F Q+++II
Sbjct: 242 ANDLRHLPSLVVATPGRLIDFIEGGQC-PMNRVNFLVLDEADQMLDMGFEPQIRKIIGHI 300
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
S RQTM+FSAT +E++ LAA L PV + + +
Sbjct: 301 SKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGN 335
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
40; n=2; core eudicotyledons|Rep: Probable DEAD-box
ATP-dependent RNA helicase 40 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1088
Score = 113 bits (273), Expect = 4e-24
Identities = 70/214 (32%), Positives = 105/214 (49%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXX 213
P PY +F + L +++ + S F PTPIQA T PIAL +D+
Sbjct: 431 PAPY---ITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTL 487
Query: 214 XYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
Y++P L + VL+L PTREL Q+ + +
Sbjct: 488 GYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPK 547
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q L + DIV+ATPGRL D I + +LVLDEADRMLD F Q+++I+
Sbjct: 548 GPQLKELERGADIVVATPGRLND-ILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIV 606
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ P+RQT++++AT +EV+ +A+ L PV++
Sbjct: 607 NEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQV 640
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 113 bits (272), Expect = 6e-24
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + + ++KA+ + TPIQ IP+A G D+ + LP+++
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 238 RLLYKAKGGDRIT-RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+LL K R T R L+ PTREL Q+ + ++ + QE +L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
DI++ATPGRL +HI + + + +IE LV DEADR+LD F +++I+
Sbjct: 122 ENGVDILVATPGRLEEHIESG-NVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNP 180
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
Q M+FSAT S ++ +L+ L+KP ++ V
Sbjct: 181 QIMMFSATTSSQLNELSKDILRKPKRIAV 209
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 113 bits (272), Expect = 6e-24
Identities = 69/210 (32%), Positives = 106/210 (50%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + LS L + NF PTPIQ+ I AL GKD+ ++LP ++
Sbjct: 3 NFSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQ 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L + + R L+L PTREL Q++ Q+A+ + + Q +R
Sbjct: 63 LLSTEPRQPG--VRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIR 120
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+IV+ATPGRL D + + L ++ +L+LDE+DRMLD F +K II +RQ
Sbjct: 121 GGANIVVATPGRLYDFM-SRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQ 179
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
T+LFSAT+ VK L ++ V++ + S
Sbjct: 180 TLLFSATLESSVKQLVETHVRNAVRIELGS 209
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 113 bits (272), Expect = 6e-24
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 3/207 (1%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
A F + LS L++ L PTP+Q IP L G+D ++LPIL
Sbjct: 2 AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61
Query: 235 ERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
++L G LVL PTREL Q+ R L + D+ Q L
Sbjct: 62 QKLSEDPYG----IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE---YFAEQMKEIIRQCS 585
+ P +VIATPGRL DH+R++ +F + I LV+DEADR+L++ F ++ I+
Sbjct: 118 SRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKP 666
+RQT+LFSAT+++ +++L ++ +P
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQP 204
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 113 bits (271), Expect = 8e-24
Identities = 70/213 (32%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+ + SF + L L++A+ L + PTPIQA IP L GKD+ + L
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 226 PILERLLYKAKGG-DRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
P + L + R R+L+L PTREL +Q+ + + Q
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+L + DI++ATPGRL+D I + + L +EV VLDEAD+MLD F ++ I +
Sbjct: 123 MRMLDRGTDILVATPGRLLDLI-DQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLL 181
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+ FSATM + +++L++ L PV + V
Sbjct: 182 PKNRQTLFFSATMPKTIQELSSQFLSDPVTVSV 214
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 113 bits (271), Expect = 8e-24
Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E+ +F ++ L+ L+K + SL + PTPIQ+ I L G DV + LP
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 229 ILERL-LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQ-FXXXXXXXXXXXXDVKYQ 402
+L R+ K K + LVL PTREL QV + A+ D++ Q
Sbjct: 63 LLSRIDTTKNK-----PQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQ 117
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L+QNP +++ TPGR++DH+R + L ++ LVLDEAD ML F E + I+
Sbjct: 118 LRALKQNPQVIVGTPGRVMDHLRRG-TLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHT 176
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
+QT LFSATM ++K + K PVK+ + ++ Q+E
Sbjct: 177 PKDKQTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQIE 220
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 113 bits (271), Expect = 8e-24
Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++ L + L+ I + NF PT IQ+ +P L G++V Y+ P+L
Sbjct: 189 SFGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLV 248
Query: 238 RLLYKAKGGDRITRV-LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + + + LV+VPTRELG QV+ T++ AQ + +Q L
Sbjct: 249 HVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKEL 308
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
R DI+IATPGRLI+ ++ + L +VLDEAD+M F Q++ II Q P +
Sbjct: 309 RAGVDIIIATPGRLIEMVKKKAT-NLQRCTYIVLDEADQMFSLGFEYQIRSIIGQIRPDK 367
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
Q +LF+ATM ++++ L L P+ + + N
Sbjct: 368 QILLFTATMKKKIRQLCVDMLIDPIVITIGEN 399
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 112 bits (270), Expect = 1e-23
Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++ L PL ++ + PTPIQ A IP+ L G D+ + LPIL+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 241 LL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L + K + R L+L PTREL Q+H ++ Q L+
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
DI+IATPGRL+D + L +E+ VLDEADRMLD F + +K+I+ KR
Sbjct: 126 GGVDILIATPGRLMD-LHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRH 184
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+ FSATM E++ LA L P K+ V
Sbjct: 185 NLFFSATMPHEIQTLANRILVNPKKVEV 212
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 112 bits (270), Expect = 1e-23
Identities = 71/211 (33%), Positives = 107/211 (50%), Gaps = 20/211 (9%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + LS +++AI +L + PTP+QA +IP+ L G+D+ ++LP +
Sbjct: 47 AFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMN 106
Query: 238 RLLY--------------------KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXX 357
L + K +G R +LV+ PTREL Q+ V ++A
Sbjct: 107 NLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIADVTG 166
Query: 358 XXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 537
K Q + L+ DI++ATPGRL+D I L ++VLVLDEADRML
Sbjct: 167 HVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACH-LDEVKVLVLDEADRML 225
Query: 538 DEYFAEQMKEIIRQCSPKRQTMLFSATMSEE 630
D F ++ I+R+ +RQT+LFSAT+ EE
Sbjct: 226 DMGFLPAVRRIVRETPAERQTLLFSATLDEE 256
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 112 bits (270), Expect = 1e-23
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F L P++ + N+ P PIQ IP + G+DV Y+LP +
Sbjct: 389 NFSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIR 448
Query: 238 RLLYKAKGGDRITR-VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+LY+ K + VL++ PTREL +Q+ + +L + + Q + L
Sbjct: 449 HVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query: 415 RQNPDIVIATPGRLID--HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ +IV TPGRLI+ I N L + +V+DEADRM D F+ Q+ I+ P
Sbjct: 509 KRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIRP 568
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGV 723
RQT LFSAT ++ LA L KP+++ V + Q++ V
Sbjct: 569 DRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKSASQVDQHV 613
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 112 bits (270), Expect = 1e-23
Identities = 76/226 (33%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
E P + SF + L L++A+ +F PT +Q IP+AL G+DV
Sbjct: 298 EKPSTEAEPSFAELGLDPRLVQAVAKQSFEKPTLVQRKAIPLALQGQDVLCKAKTGSGKT 357
Query: 211 XXYMLPILERLLYKAKGGDR--ITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXX 384
Y+LP+L +L K K D T L+LVPTREL QV Q + F
Sbjct: 358 AAYVLPVLSAIL-KRKSTDPAPFTAGLILVPTRELADQVFKAIEQFSAFCAKDIHAAKLT 416
Query: 385 XDVK--YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQ 558
+V Q S+L PDIV++TP R H N+ + L ++ LVLDEAD +L + E
Sbjct: 417 ENVSDAVQRSLLANVPDIVVSTPARAW-HSVNSSALSLSQLQYLVLDEADLVLSYGYDED 475
Query: 559 MKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXG 696
M+ I R QT + SAT+S E+ L + + P L + G
Sbjct: 476 MENIARALPKGVQTTMMSATLSAELDTLKGIFCRNPTVLDLQEEFG 521
>UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 735
Score = 112 bits (270), Expect = 1e-23
Identities = 67/210 (31%), Positives = 107/210 (50%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L++P A+ + +F+ T IQ IP AL G+D+ +++P++E
Sbjct: 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L K LV+ PTREL Q ++ + + K ++ L +
Sbjct: 101 LYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR 160
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I++ TPGRL+ HI +F +++L+LDEADR+LD F + I+ RQT
Sbjct: 161 M-NILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQT 219
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
MLFSAT ++ VKDLA +SL+ P + V+ N
Sbjct: 220 MLFSATQTKSVKDLARLSLQNPDFISVHEN 249
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 111 bits (268), Expect = 2e-23
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E ++F N S L KA+ + F+ P+PIQA TIP+ L G+D + LP
Sbjct: 4 EISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALP 63
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQF-XXXXXXXXXXXXDVKYQE 405
IL+ L + T+ L+L PTREL QV L+++ + Q
Sbjct: 64 ILQNLSPEIS----TTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQL 119
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
LR +V+ TPGR++DHI + + L++++ +LDEAD ML F E ++ I+ +
Sbjct: 120 KQLRSGAQVVVGTPGRILDHI-DKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLP 178
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
K+Q LFSATM ++ +A L P +
Sbjct: 179 EKKQMALFSATMPYRIRQIANTYLNDPASI 208
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 111 bits (268), Expect = 2e-23
Identities = 69/193 (35%), Positives = 102/193 (52%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
L + + S + T +Q IP+AL G D+ Y++P+++ L K
Sbjct: 11 LEENLKSSELLSATEVQQQAIPLALEGADLLISSPTGSGKTAAYLIPVIQELS-AGKSPT 69
Query: 268 RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
R + +VLVP REL Q+ + +LA D K QE L + D+V+ATP
Sbjct: 70 RQPKAIVLVPVRELAEQIASFFDKLAAGLDLNAVAIVGGEDFKKQEKQLAR-ADLVVATP 128
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRLI H+ N S L S+++LVLDEADR+L+ F E + +I+ C RQT+L SAT+
Sbjct: 129 GRLIPHLENR-SIELDSLDLLVLDEADRILETGFKEALDQILTLCPEARQTLLVSATLPT 187
Query: 628 EVKDLAAVSLKKP 666
V+ LA L++P
Sbjct: 188 SVRKLAERILQEP 200
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 111 bits (268), Expect = 2e-23
Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 5/212 (2%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F+++ L LM+AI + + + +PIQA T+P AL G D +++ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 241 LLYKAKGGDRI--TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
LL + R L+L PTREL Q+ + L ++ D Q+ L
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQKQQL 148
Query: 415 R-QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC--S 585
Q DI++ATPGRLID + F L IE+L++DEADRMLD F +K I+R +
Sbjct: 149 HEQRTDILVATPGRLIDFMNRKAVF-LDQIEMLIIDEADRMLDMGFIPDIKTIVRATPRT 207
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+LFSAT S+++ +LA PV++ V
Sbjct: 208 ENRQTLLFSATFSQDILNLAQRWTNDPVRVEV 239
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 111 bits (268), Expect = 2e-23
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E PP + E SF L +M + ++ PTPIQ IPI L G+D+
Sbjct: 167 ENPPDHVE--SFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGK 224
Query: 208 XXXYMLPILERLLYKAKGGDRITR---VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXX 378
+MLP++ LL K + TR ++++ PTREL Q+H R+ A
Sbjct: 225 TAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSY 284
Query: 379 XXXDVKYQESVLRQNPDIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDEYFAE 555
V++Q ++R +++ATPGRL+D I R +F ++ +VLDEADRMLD F
Sbjct: 285 GGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTF--ENVNFVVLDEADRMLDMGFLP 342
Query: 556 QMKEIIRQCS----PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
+++++ + +RQT++FSAT E+++LA L + +FV G +E
Sbjct: 343 SIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACADVE 399
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 111 bits (268), Expect = 2e-23
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Frame = +1
Query: 13 DSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
+ D E P E F + L ++ + L F IQ IPI L G D+
Sbjct: 16 EEDVVTEEQPKKE---FSTLPLHEKTLEVLKRLPFNTMYAIQEQAIPILLSGGDILAAAK 72
Query: 193 XXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXX 372
+++P ++ L K T VL++ PTREL Q+ V L +
Sbjct: 73 TGSGKTLAFLIPAIDLLFRKNATKKDGTIVLIVAPTRELADQIFDVATLLLKDTEVSFGA 132
Query: 373 XXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 552
+ K + ++L+ ++++ATPGRL DHI T + L ++++L++DEADR+L++ +
Sbjct: 133 AYGGKEKKNETTLLKSGINLLVATPGRLCDHILTTKDWSLENLKMLIIDEADRILEDGYK 192
Query: 553 EQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLK-KPVKLFVNSN 690
+Q+ I+ +RQT LFSAT +++V +A VS K PV + V+ N
Sbjct: 193 DQLHAIVEGIPSERQTALFSATQTKDVSKIAEVSFKHTPVYVGVDDN 239
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 111 bits (268), Expect = 2e-23
Identities = 74/208 (35%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P + F++ NL+ LM AI L F + TPIQA + L G+D +
Sbjct: 4 PQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAF 63
Query: 220 MLPILERLLYKAKGGDRIT---RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD 390
++ I+ +LL +R R L++ PTREL Q+ L ++ D
Sbjct: 64 LISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMD 123
Query: 391 VKYQESVLRQN-PDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
Q L DI++ATPGRL+D L +EV+VLDEADRMLD F Q+++
Sbjct: 124 FDKQLKQLEARFCDILVATPGRLLD-FNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQ 182
Query: 568 IIRQCSPK--RQTMLFSATMSEEVKDLA 645
IIRQ K RQT+LFSAT +++V +LA
Sbjct: 183 IIRQTPHKGERQTLLFSATFTDDVMNLA 210
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 111 bits (267), Expect = 2e-23
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + +S + TPIQ IP+ L GKD+ ++LPILE
Sbjct: 6 NFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILE 65
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHA-VTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
++ + D + L++ PTREL Q+ + + L Q DV Q L
Sbjct: 66 KI--DPESSD--VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+ N IV+ATPGRL+DHIR + L ++ +VLDEAD+ML F +++I+ + +
Sbjct: 122 KGNTHIVVATPGRLLDHIRRE-TIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK 180
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
QTMLFSAT+ +++K LA + +P + V S
Sbjct: 181 QTMLFSATIPKDIKKLAKRYMDEPQMIQVQS 211
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 111 bits (267), Expect = 2e-23
Identities = 71/218 (32%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Frame = +1
Query: 16 SDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXX 195
+D E P E F + + ++ AI ++ + P+PIQA IP+ L G D+
Sbjct: 10 ADAHEADPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQT 69
Query: 196 XXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLA-QFXXXXXXX 372
+ LP+L R+ R ++L+L PTREL QV A Q
Sbjct: 70 GTGKTAAFALPMLSRI----DPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVA 125
Query: 373 XXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 552
+ Q LRQ I++ATPGRL DH+R L +++ LVLDEAD ML F
Sbjct: 126 VYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEQL-LSTVKHLVLDEADEMLKLGFM 184
Query: 553 EQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKP 666
E ++ I RQT+LFSAT+ ++++A L +P
Sbjct: 185 EDLEVIFAALPESRQTVLFSATLPHSIREIAEKHLHEP 222
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 111 bits (267), Expect = 2e-23
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+ + F ++ L L++AI + P+PIQ +IP L GKDV + L
Sbjct: 3 ESSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTL 62
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQ 402
P+L R + R +VLVL PTREL QV ++ D Q
Sbjct: 63 PLLARTQNEV----REPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQ 118
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L+Q P V+ TPGR++DHIR + L I +VLDEAD ML F + + ++ Q
Sbjct: 119 FRALKQGPQWVVGTPGRVMDHIRRG-TLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQV 177
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
KRQ LFSATM +++K +A L++P ++ + S +E
Sbjct: 178 PEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIE 221
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 111 bits (267), Expect = 2e-23
Identities = 74/201 (36%), Positives = 106/201 (52%), Gaps = 1/201 (0%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
LM + F PT IQA IAL G D+ ++LP + +L +A+ D
Sbjct: 145 LMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQTGSGKTLAFLLPAIVHILAQARSHD 204
Query: 268 RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
+ L+L PTREL Q++ ++ + D Q+S LR+ P I+IA P
Sbjct: 205 --PKCLILAPTRELTLQIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACP 262
Query: 448 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSE 627
GRLID + + L + LVLDEADRMLD F Q+++I+ Q P+RQTMLFSAT +
Sbjct: 263 GRLID-LLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPK 321
Query: 628 EVKDLAAVSLK-KPVKLFVNS 687
EV+ LA K +PV + + +
Sbjct: 322 EVQKLALDFCKQEPVHIQIGN 342
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 111 bits (267), Expect = 2e-23
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + +S ++++ S+ F PTPIQ +IP AL G D+ + +P++E
Sbjct: 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIE 62
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+++ G + + L+L PTREL QV R+ ++ ++ Q L+
Sbjct: 63 KVV-----GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALK 117
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKR 594
+ P IV+ TPGR+IDH+ N + I L+LDEAD M++ F + M+ I+ + + +R
Sbjct: 118 KGPQIVVGTPGRVIDHL-NRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQR 176
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
QTMLFSATM + ++ L +K P + +N Q+E
Sbjct: 177 QTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIE 216
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 111 bits (267), Expect = 2e-23
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
++ L+ ++ + LN+ P PIQ +PI + G+D ++LP+L
Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590
Query: 241 LLYK--AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + + GD LV+ PTREL Q+H+ R+ ++ V Q S L
Sbjct: 591 IKDQPPVEAGDGPIG-LVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 649
Query: 415 RQNPDIVIATPGRLIDHIRNTPS--FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ +IV+ TPGR+ID + + L + LV+DEADRM D F Q+ II+ P
Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+RQT+LFSAT +V+ LA L KPV++ V
Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQV 740
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 111 bits (267), Expect = 2e-23
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Frame = +1
Query: 37 PPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXX 216
PP ++ SF ++ +S L++++ SL PTPIQ+ TIP L G+D+
Sbjct: 105 PP--KHTSFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLC 162
Query: 217 YMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVH---AVTRQLAQFXXXXXXXXXXXX 387
+ LPIL +L+ GG + VL PTRELG Q+H + A+
Sbjct: 163 FALPILNKLIKDMVGGFAV----VLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMD 218
Query: 388 DVKYQESVLRQNPDIVIATPGRLIDHIRN--TPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
+K + P +++ATPGRL+DH+R+ +GL + LVLDEADR+L + F ++
Sbjct: 219 MMKQASELANLRPHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPEL 278
Query: 562 KEI--IRQCSPKRQTMLFSATMSEEVKDLAAVSLKKP 666
+ + + + QT+LF+AT++E+V + A + K+P
Sbjct: 279 EYLYSVLPSAKTLQTLLFTATLTEQVVEFA--NAKRP 313
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 111 bits (266), Expect = 3e-23
Identities = 74/202 (36%), Positives = 103/202 (50%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F ++LS L+ A+ +F PT IQA IP L G+D+ Y LP+LE+
Sbjct: 3 FSTLSLSSELIHALPK-DFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L G + + L+LVP REL QV Q+ Q D + Q L
Sbjct: 62 L-----GVNPEQKALILVPIRELATQVSEAINQVGQALGLNAVCLCGGVDKEQQLQALAT 116
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
NP I++AT GRL+D N L +I LVLDEADR+L+ F ++ I Q S +RQT
Sbjct: 117 NPHILVATTGRLVDLANN--GLDLSNIHYLVLDEADRLLNMGFWPDVQNIAGQISNQRQT 174
Query: 601 MLFSATMSEEVKDLAAVSLKKP 666
+FSAT S+E+K A + ++ P
Sbjct: 175 AMFSATFSDELKGKAKLLMQAP 196
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 111 bits (266), Expect = 3e-23
Identities = 71/204 (34%), Positives = 99/204 (48%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + + + A+ VH PIQ T+P+AL D+ + +P+++
Sbjct: 86 TFAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQ 145
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L +G D + LV+VPTREL QV A + + Q S LR
Sbjct: 146 TVLAAKEGADGRPQALVVVPTRELCVQVTADVTRAGARRGLRVLSVYGGRAYEPQLSALR 205
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
DIV+ TPGRL+D R L + LVLDEAD MLD F ++ I+ Q +RQ
Sbjct: 206 AGVDIVVGTPGRLLDLARQHV-LDLAGVGTLVLDEADEMLDLGFLPDVERIMSQLPTERQ 264
Query: 598 TMLFSATMSEEVKDLAAVSLKKPV 669
TMLFSATM V LA +K+PV
Sbjct: 265 TMLFSATMPGPVISLARRFMKRPV 288
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 111 bits (266), Expect = 3e-23
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E SF ++ LS ++KAI + + PTPIQ IP+ L G DV + +P
Sbjct: 2 EIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIP 61
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXD-VKYQE 405
+E + +R + +VL P+REL QV +LA ++ Q
Sbjct: 62 AIEL----CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQI 117
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
L + I+I TPGR+IDHI+ L ++ ++VLDEAD+MLD F E ++EI+
Sbjct: 118 KALSRGVQIIIGTPGRVIDHIKRKTLL-LDAVSLVVLDEADQMLDMGFREDIEEILSHIP 176
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPV 669
+RQT++ SAT E+ D++ K P+
Sbjct: 177 KERQTVILSATFPPEILDISRRFQKNPI 204
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 110 bits (265), Expect = 4e-23
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF ++L PL+ A+ + + P+PIQA IP L G D+ + LP+L+
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQV-HAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
RL K +VLVL PTREL QV A R + Q L
Sbjct: 105 RLDLAVKN----PQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQL 160
Query: 415 RQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR 594
+ +++ TPGR++DHI S L S+ LVLDEAD ML F + ++ I++ +R
Sbjct: 161 ARGAHVIVGTPGRVMDHIERK-SLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAER 219
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
QT LFSATM + ++ +A L++P ++ + ++
Sbjct: 220 QTALFSATMPDAIRRVAHRYLREPREVKIKAS 251
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 110 bits (265), Expect = 4e-23
Identities = 71/205 (34%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
E P + +F + L PL++A+ + P+PIQA +P AL G +V
Sbjct: 18 ETPDQNATVTFAEIGLPAPLVQALARNSITVPSPIQALAVPDALAGTNVLGRAQTGSGKT 77
Query: 211 XXYMLPILERLL-YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX 387
+ LP+L RL ++ + + R LVLVPTREL QV A
Sbjct: 78 LAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSYAGAMGLTVRPAVGGT 137
Query: 388 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
Q LR+ DI++ATPGRL DH+R L SIE+ LDEAD+M D F +++
Sbjct: 138 PFSKQVDQLRRGVDILVATPGRLNDHLRQGTCI-LDSIEITALDEADQMADMGFLPEVRA 196
Query: 568 IIRQCSPKRQTMLFSATMSEEVKDL 642
I+ + Q +LFSAT+ EV+ L
Sbjct: 197 ILGETRADGQRLLFSATLDREVQSL 221
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 110 bits (265), Expect = 4e-23
Identities = 69/213 (32%), Positives = 103/213 (48%)
Frame = +1
Query: 37 PPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXX 216
P E +F + + + A+ + IQ +PIAL G D+
Sbjct: 104 PVSPEAPTFAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLG 163
Query: 217 YMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
+ +P+LE++L A+GGD + LV+VPTRELG QV + +
Sbjct: 164 FGVPLLEQVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQAAGSTRGVRVLPIYGGVAYE 223
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
Q LR +I++ TPGRL+D + L + LVLDEADRMLD F + ++ I+
Sbjct: 224 PQIEALRSGVEILVGTPGRLLD-LAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILA 282
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
RQTMLFSATM + + L+ L++PV +
Sbjct: 283 ILPEDRQTMLFSATMPDPIVALSRRFLRRPVTI 315
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 110 bits (265), Expect = 4e-23
Identities = 74/213 (34%), Positives = 102/213 (47%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F + NL +PL+ AI F PTPIQ IP L G DV +++P
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+L L AK R LVL PTREL Q+ L +F + Q
Sbjct: 80 MLNTLKAHAKIVG--IRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFE 137
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
+L NPD+V+ATPGRL+ HI S L S+ LVLDEADR+ + Q+ I+++
Sbjct: 138 LLASNPDVVVATPGRLL-HIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPE 196
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
Q LFSATM + + + L PV + ++S
Sbjct: 197 SCQRALFSATMPTVLAEFTSAGLHNPVVIRLDS 229
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 110 bits (265), Expect = 4e-23
Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
D S+ + + + +M + F P+PIQ+ P+ L G D+ ++L
Sbjct: 98 DPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLL 157
Query: 226 PILERLLYK--AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
P + + + K GD VLVL PTREL Q+ + + + D
Sbjct: 158 PSIVHINAQPTVKKGDGPI-VLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYS 216
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
Q ++L+Q D+VIATPGRLID + + + L + LVLDEADRMLD F Q+++I+ Q
Sbjct: 217 QRALLQQGVDVVIATPGRLIDFLESETTT-LRRVTYLVLDEADRMLDMGFEIQIRKILGQ 275
Query: 580 CSPKRQTMLFSATMSEEVKDLA 645
P RQT++FSAT + V++LA
Sbjct: 276 IRPDRQTLMFSATWPKNVQNLA 297
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 110 bits (265), Expect = 4e-23
Identities = 70/218 (32%), Positives = 104/218 (47%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXX 213
PPP SF L L++ + S F P+PIQA + PIA+ +D+
Sbjct: 157 PPPL---MSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTL 213
Query: 214 XYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV 393
Y++P L +LVL PTREL Q+ + +
Sbjct: 214 GYLIPGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPK 273
Query: 394 KYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
Q + + DIV+ATPGRL D I LH + LVLDEADRMLD F Q+++I+
Sbjct: 274 GPQLKEIERGVDIVVATPGRLND-ILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIV 332
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+ KRQT++++AT +EV+ +AA L P ++ + +
Sbjct: 333 NEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGN 370
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 110 bits (265), Expect = 4e-23
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
++ L+ ++ + LN+ P PIQA +PI + G+D ++LP+L
Sbjct: 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 457
Query: 241 LLYK--AKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVL 414
+ + + GD LV+ PTREL Q+++ R+ ++ V Q S L
Sbjct: 458 IKDQPPVEAGDGPIG-LVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISEL 516
Query: 415 RQNPDIVIATPGRLIDHIRNTPS--FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
++ +IV+ TPGR+ID + + L + LV+DEADRM D F Q+ I++ P
Sbjct: 517 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRP 576
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT+LFSAT +V+ LA L KPV++ V
Sbjct: 577 DRQTVLFSATFPRQVETLARKVLNKPVEIQV 607
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,666,777
Number of Sequences: 1657284
Number of extensions: 18520164
Number of successful extensions: 55544
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 50457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53411
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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