Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K17
(902 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 6e-30
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 122 5e-28
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 5e-26
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 115 5e-26
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 98 1e-20
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 98 1e-20
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 6e-19
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 87 2e-17
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 84 1e-16
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 82 5e-16
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 81 1e-15
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-15
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 77 2e-14
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 77 2e-14
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 66 3e-11
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 65 8e-11
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 61 1e-09
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 61 1e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 60 2e-09
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 58 7e-09
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 58 1e-08
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 58 1e-08
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 5e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 40 0.002
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 38 0.015
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 37 0.026
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.24
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 33 0.24
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 33 0.32
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 30 2.2
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 29 5.1
SB_1880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061) 29 5.1
SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_9809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 128 bits (309), Expect = 6e-30
Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 1/209 (0%)
Frame = +1
Query: 40 PYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
P S + ++S ++ I + F T IQ +I L G+D+ +
Sbjct: 567 PDSHEFSALSEDVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAF 626
Query: 220 MLPILERLLYKAKGGDRI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
++P++E LLYK + R T V+++ PTREL Q + V R L + + K
Sbjct: 627 LVPVVE-LLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRK 685
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 576
+ L++ +++IATPGRL+DH++NT F +++ LV+DEADR+L+ F E+M++IIR
Sbjct: 686 AEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIR 745
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKK 663
KRQT+LFSAT ++ V+DLA +SLK+
Sbjct: 746 ILPSKRQTVLFSATQTKNVEDLAKLSLKR 774
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 122 bits (293), Expect = 5e-28
Identities = 72/207 (34%), Positives = 108/207 (52%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E F + +S+ + + FV PT IQ IP+AL G+DV +++P
Sbjct: 48 EVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIP 107
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
I+E L + LV+ PTREL Q V ++ D+K ++
Sbjct: 108 IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQK 167
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
+ + +IV+ TPGRL+ H+ TP+F S+++LVLDEADR+LD FA + II
Sbjct: 168 RIMKT-NIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPS 226
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPV 669
+RQT+L+SAT + VKDLA +SL+ V
Sbjct: 227 ERQTLLYSATQTRSVKDLARLSLQSYV 253
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 115 bits (277), Expect = 5e-26
Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Frame = +1
Query: 28 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
E PP + SF + LM I + PTP+Q A +PI + G+D+
Sbjct: 472 ENQPP--KITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGK 529
Query: 208 XXXYMLPILERLLYKA-KGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXX 384
YMLP+L L+ + R L + PTREL Q++ R+ +
Sbjct: 530 TAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGG 589
Query: 385 XDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMK 564
V YQ S L + ++ TPGRL D + + L SI+ L+LDEADRMLD F +
Sbjct: 590 VSVPYQASQLERGCHFLVGTPGRLQDFVSREKIY-LGSIQHLILDEADRMLDLGFGPDIH 648
Query: 565 EIIRQ----CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
++I + RQT++FSAT +E++ LA S KP LF+ GG L+
Sbjct: 649 KLIEESNMTAKESRQTLMFSATFPDEIQHLAG-SFLKPDYLFLAVGRVGGTNLD 701
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 115 bits (277), Expect = 5e-26
Identities = 73/219 (33%), Positives = 108/219 (49%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + L++ L+ ++ PT IQ +P L G+D + LPIL+
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L G +VL PTREL Q+ + L + D+ Q L
Sbjct: 68 KLCDDPYG----IFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLA 123
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
P +VIATPGRL DHI++T + L I+ LVLDEADR+LD F + +K I KRQ
Sbjct: 124 NKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQ 183
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
T+LFSAT+++ + +L +S +P V S+ +L+
Sbjct: 184 TLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAELD 222
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 98.3 bits (234), Expect = 7e-21
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 9/239 (3%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF NL + + + PTP+Q +IPI + G+DV ++LP++
Sbjct: 712 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771
Query: 238 RLLYKAKGGDRIT-----RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
++ + + + + PTREL Q++ R+ A V +Q
Sbjct: 772 SMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQ 831
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L+ ++++ TPGRL D I L ++ L+LDEADRMLD F ++ I+
Sbjct: 832 LRQLQSGCNLLVGTPGRLTDFIEK-GKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESM 890
Query: 583 ----SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVREDTQGXR 747
+RQT++FSAT EE++ LA L + L V G +E V E T +
Sbjct: 891 GMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVGGTTSDIEQTVIEVTDNEK 949
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 97.9 bits (233), Expect = 1e-20
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L R L+ I F P+PIQ +IP+AL G+D+ Y++P+LER
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR- 417
+ LVLVPTREL Q + +L + +K + +LR
Sbjct: 109 ----TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK--DDILRL 162
Query: 418 QNPDI--------VIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
N DI ++ATPGR++D ++ + + ++LV+DEAD++L F + +++II
Sbjct: 163 YNKDIFVHVVVHVIVATPGRVLDLMKKKLA-DMSKCQMLVMDEADKLLSMDFKKMLEQII 221
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ RQ +LFSAT V+D L+KP ++
Sbjct: 222 KHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 97.9 bits (233), Expect = 1e-20
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + L R L+ I F P+PIQ +IP+AL G+D+ Y++P+LER
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR- 417
+ LVLVPTREL Q + +L + +K + +LR
Sbjct: 109 ----TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK--DDILRL 162
Query: 418 QNPDI--------VIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
N DI ++ATPGR++D ++ + + ++LV+DEAD++L F + +++II
Sbjct: 163 YNKDIFVHVVVHVIVATPGRVLDLMKKKLA-DMSKCQMLVMDEADKLLSMDFKKMLEQII 221
Query: 574 RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+ RQ +LFSAT V+D L+KP ++
Sbjct: 222 KHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 91.9 bits (218), Expect = 6e-19
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + +M +I L + PT IQ +PIAL G+D+ ++ P L
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 238 RLL--YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++ + + GD VL+ PTREL Q++ R+ + + Q
Sbjct: 578 HIMDQPELQVGDG-PIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 636
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
L++ +IV+ATPGRLIDH++ + LH + LV DEADRM D FA
Sbjct: 637 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYLVFDEADRMFDMGFA------------- 682
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+LFSAT ++V+ L L PV++ +
Sbjct: 683 ---LLFSATFKKKVEHLCRDILVDPVRVVI 709
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 86.6 bits (205), Expect = 2e-17
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Frame = +1
Query: 13 DSDFFE--EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXX 186
+S+F E EP F +S+ + + + PIQA+T G+DV
Sbjct: 57 ESEFDEGVEPSVAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQ 116
Query: 187 XXXXXXXXXXYMLPILERL----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFX 354
+ LP++E+L L + +G R +VLV+ PTREL QV L
Sbjct: 117 ARTGTGKTLSFALPLVEKLQDGKLSQKRG--RAPKVLVMAPTRELAKQVGNEFENLKS-- 172
Query: 355 XXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRM 534
+ QE+ + D+++ TPGR++D +R + L ++ +VLDE DRM
Sbjct: 173 NLEVYCIYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQ-GTLDLSKLKHVVLDEVDRM 231
Query: 535 LDEYFAEQMKEII-----RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
LD FAE ++E++ K QT+LFSAT+ + A +KK KL
Sbjct: 232 LDMGFAESVEEVLAASYAEDREDKPQTLLFSATLPPWAVNTAKKYMKKDRKL 283
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/189 (29%), Positives = 88/189 (46%)
Frame = +1
Query: 115 FVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLV 294
F P+ IQ I L G+DV + + +L+ + + R + LVL
Sbjct: 17 FEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQL----REPQALVLS 72
Query: 295 PTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRN 474
PTREL Q+ V L + ++ L IV TPGR+ D IR
Sbjct: 73 PTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRR 132
Query: 475 TPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVS 654
+ SI++LVLDEAD ML++ F EQ+ ++ R P Q +L SAT+ E+ ++ +
Sbjct: 133 R-NLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKF 191
Query: 655 LKKPVKLFV 681
+ P+++ V
Sbjct: 192 MTDPIRILV 200
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/136 (41%), Positives = 71/136 (52%)
Frame = +1
Query: 280 VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLI 459
VLVL PTREL QV V + + Q L + +I IATPGRLI
Sbjct: 135 VLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLI 194
Query: 460 DHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKD 639
D + + + L LVLDEADRMLD F Q++ II Q P RQT+++SAT +EV+
Sbjct: 195 DMLESRKT-NLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQG 253
Query: 640 LAAVSLKKPVKLFVNS 687
LA L V + V S
Sbjct: 254 LAHDFLSDYVHITVGS 269
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 82.2 bits (194), Expect = 5e-16
Identities = 45/96 (46%), Positives = 56/96 (58%)
Frame = +1
Query: 31 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
E P DE + Y+ +A+ L F+HPTPIQA+TIP+AL+GKDV
Sbjct: 2 EARPSDEVLNAYDSLDEEAEDRAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKT 61
Query: 211 XXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQ 318
+MLPILERLLY+ I RVLV+ PTREL Q
Sbjct: 62 AAFMLPILERLLYRPTQSPAI-RVLVITPTRELAIQ 96
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 81.0 bits (191), Expect = 1e-15
Identities = 72/234 (30%), Positives = 103/234 (44%), Gaps = 26/234 (11%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF+++NL L + NF PTPIQ ++ + G+D+ Y LP+
Sbjct: 73 SFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCM 132
Query: 238 RLLYKAKGGDRITRV-LVLVPTREL---------------------GAQVHAVTRQLAQF 351
L KA T V L+L PTREL G +V QF
Sbjct: 133 LLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQF 192
Query: 352 XXXXXXXXXXXX-DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEAD 528
V Q LR+ D+V+ATPGRL+D L+ I LV+DE D
Sbjct: 193 TARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD---------LYKITYLVMDEPD 243
Query: 529 RMLDEYFAEQMKEII---RQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RML EQ+++I+ S RQT+L+SAT+ E ++ LA ++ P+ + V
Sbjct: 244 RMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQV 297
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 72.1 bits (169), Expect(2) = 2e-15
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Frame = +1
Query: 283 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 462
+V+ PTREL Q+H ++ + + Q + L++ +I++ TPGR+ID
Sbjct: 148 IVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 207
Query: 463 HI--RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI-------IRQC-SPKRQTMLFS 612
+ N LVLDEADRM D F Q+ +I I C P RQT++FS
Sbjct: 208 MLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFS 267
Query: 613 ATMSEEVKDLAAVSLKKPVKLFV 681
AT +++ LA L KP+++ V
Sbjct: 268 ATFPRQMEALARKILDKPIEIQV 290
Score = 28.3 bits (60), Expect(2) = 2e-15
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 112 NFVHPTPIQAATIPIALLGKDV 177
++ PTPIQA IP+ + G+D+
Sbjct: 124 SYEKPTPIQAQAIPVIMSGRDM 145
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/145 (31%), Positives = 69/145 (47%)
Frame = +1
Query: 247 YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNP 426
YK K G + LVL PTREL Q+ V L + +V+ L +
Sbjct: 151 YKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGV 210
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTML 606
+V+ TPGR+ D I N I++ VLDEAD ML F +Q+ ++ + Q +L
Sbjct: 211 HVVVGTPGRVFDMI-NRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVL 269
Query: 607 FSATMSEEVKDLAAVSLKKPVKLFV 681
SATM +V ++ ++ V++ V
Sbjct: 270 LSATMPTDVLEVTNKFMRDVVRILV 294
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 77.0 bits (181), Expect = 2e-14
Identities = 47/130 (36%), Positives = 66/130 (50%)
Frame = +1
Query: 169 KDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQ 348
KDV + LPIL+ LL + R+ L+L PTREL Q+ L
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQ---RLF-ALILTPTRELAFQISEQCEALGS 57
Query: 349 FXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEAD 528
D+ Q +L + P I+IATPGRLIDH+ NT F L +++ LV+DEAD
Sbjct: 58 GIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEAD 117
Query: 529 RMLDEYFAEQ 558
R+L+ F ++
Sbjct: 118 RILNMDFEKE 127
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 77.0 bits (181), Expect = 2e-14
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Frame = +1
Query: 46 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYML 225
+E F+++ LS L++ + F P+PIQ IP+ G D+ + +
Sbjct: 10 EEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSV 69
Query: 226 PILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLA-QFXXXXXXXXXXXXDVKYQ 402
LE ++ ++ ++++L PTRE+ QV V + + ++
Sbjct: 70 IALENVITESN----CIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEED 125
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
+ L+ + I + TPGR + ++ S+ + +LDEAD++LDE F +Q+ I
Sbjct: 126 KKALK-SCHIAVGTPGR-VKYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSAL 183
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+Q M FSAT E + + + +P + +N+
Sbjct: 184 PENKQMMAFSATYPEVLANHLKKYMTEPTFVRLNA 218
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 73.7 bits (173), Expect = 2e-13
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +++L L+ +G + PTP+Q IPI +D+ +++PIL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPIL-- 934
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
+R+ + P ++ R + D+ Q L +
Sbjct: 935 -----------SRIYMEGPPAPPDFSYRSLCRPCVVYGGA---------DIGSQLRELDR 974
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS-PK-- 591
N +++ATPGRL+D + + GL SI LVLDEADRMLD F Q++ I+ Q S PK
Sbjct: 975 NCHLLVATPGRLVD-MMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTG 1033
Query: 592 -RQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
RQT++FSAT +E++ LA L+ + L V
Sbjct: 1034 IRQTLMFSATFPKEIQMLARDFLENYIFLAV 1064
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 66.5 bits (155), Expect = 3e-11
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++ F + L L++AI F HP+ +Q IP A+LG D+ ++L
Sbjct: 46 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLAT 105
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQF-XXXXXXXXXXXXDVKYQES 408
L++L + D VLV+ TREL Q+H + ++ ++K +
Sbjct: 106 LQQL----EPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQ 161
Query: 409 VLRQN-PDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE 543
L+ N P IV+ TPGR++ R + L + +LDE D+ML++
Sbjct: 162 TLKTNCPHIVVGTPGRILALTRE-KTLNLKHAKHFILDECDKMLEQ 206
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 66.5 bits (155), Expect = 3e-11
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++ F + L L++AI F HP+ +Q IP A+LG D+ ++L
Sbjct: 46 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLAT 105
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQF-XXXXXXXXXXXXDVKYQES 408
L++L + D VLV+ TREL Q+H + ++ ++K +
Sbjct: 106 LQQL----EPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQ 161
Query: 409 VLRQN-PDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE 543
L+ N P IV+ TPGR++ R + L + +LDE D+ML++
Sbjct: 162 TLKTNCPHIVVGTPGRILALTRE-KTLNLKHAKHFILDECDKMLEQ 206
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 64.9 bits (151), Expect = 8e-11
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 5/177 (2%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + L ++KA+ +LN PT IQ TIP + V Y+ P++
Sbjct: 379 SFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVH 438
Query: 238 RLLYKAKGGDRITRV-----LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL + + R+ ++VP REL Q+ + L K+
Sbjct: 439 RLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWM 498
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 573
L D+++ATPG L+ + R + LV+DEAD M D F EI+
Sbjct: 499 RDDLESPVDLLVATPGTLLKY-RQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEIL 554
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 60.9 bits (141), Expect = 1e-09
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Frame = +1
Query: 277 RVLVLVPTRELGAQVHAVTRQLAQ---FXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
R +V+ PTREL Q++ LA+ F + +S R DI++ TP
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRF--DILVTTP 264
Query: 448 GRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDE---YFAEQMKEIIRQCS-PKRQTMLFS 612
RL+ + + P LH++E L+LDEAD++ +E F EQ+ I + C+ P LFS
Sbjct: 265 NRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFS 324
Query: 613 ATMSEEVKDLAAVSLKKPVKLFV 681
AT+S +++ A + L V++ V
Sbjct: 325 ATLSNGIEEWAGLHLDNHVRVTV 347
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +1
Query: 499 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLF 678
+E+LVLDEADRMLD F ++ ++ + KRQ +LFSAT S+++K LA L P+++
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIE 63
Query: 679 V 681
V
Sbjct: 64 V 64
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +1
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
+++ATPGR+++ I + + L + V+DE D ML F +Q+++I+ + S +RQTMLF
Sbjct: 258 VIVATPGRMVEII-SRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLF 316
Query: 610 SATMSEEVKDLAAVSLKKPVKLFVNS 687
SAT+ ++ +A+ L PV + S
Sbjct: 317 SATIPPSIEAMASRLLNAPVFISAGS 342
Score = 33.1 bits (72), Expect = 0.32
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 177
F++ + + L K + + + PTPIQ +P+ L G+DV
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDV 236
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 58.4 bits (135), Expect = 7e-09
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 1/205 (0%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + LS L + + + F P+ IQ +P+ L V +
Sbjct: 104 SFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT- 162
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
+L + +V+ L PT EL Q V + + + ++ +
Sbjct: 163 -MLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGN-QFPRGQ-K 219
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLD-EYFAEQMKEIIRQCSPKR 594
I+I TPG L+D IR + F + V VLDEAD M+ + +Q I +
Sbjct: 220 CTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDC 279
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPV 669
Q +LFSAT E+V A + P+
Sbjct: 280 QVLLFSATYDEDVMKFAETVVPNPI 304
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 508 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
LVLDEADRM+D F E ++ I +RQT+LFSATM +++++ A +L KPV VN
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVT--VNV 77
Query: 688 NXGGGLQLE 714
G L+
Sbjct: 78 GRAGAASLD 86
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 508 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
LVLDEADRM+D F E ++ I +RQT+LFSATM +++++ A +L KPV VN
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVT--VNV 77
Query: 688 NXGGGLQLE 714
G L+
Sbjct: 78 GRAGAASLD 86
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 55.6 bits (128), Expect = 5e-08
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALL-GKDVXXXXXXXXXXXXXYMLPILERL- 243
+ ++ +++A+G F PTPIQ+ +IP ALL +D+ + +PI++ +
Sbjct: 135 LGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIE 194
Query: 244 LYKAKGGDRITR--------------VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXX 381
YK + ++ L++ PTREL QV + A++
Sbjct: 195 AYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVG 254
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFG 489
Q+ +L+Q P+IV+ATPGRL + I + G
Sbjct: 255 GMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTHG 290
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 53.2 bits (122), Expect = 3e-07
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +1
Query: 145 TIPIALLGKDVXXXXXXXXXXXXXYMLPILERL-LYKAKGGDRITRVLVLVPTRELGAQV 321
T+P+ + GKDV +++P+ E+L + AK G R L+L PTREL Q
Sbjct: 311 TLPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVG---IRALILSPTRELALQT 367
Query: 322 HAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSI 501
++L +F + SV+ D V+ATPGR + H+ L S+
Sbjct: 368 QKFIKELGRF-------------TGLKSSVI-LGGDSVVATPGRFL-HVVMEMELKLSSV 412
Query: 502 EVLVLDEADR 531
E +V DEADR
Sbjct: 413 EYVVFDEADR 422
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 42.3 bits (95), Expect = 5e-04
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 4/179 (2%)
Frame = +1
Query: 13 DSDFFEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXX 192
+ D E + + F N + L++ + + P PIQ +P K +
Sbjct: 146 EGDQIESFQDSEISCEFSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSE 205
Query: 193 XXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQ-VHAVTRQLAQFXXXXXX 369
++LP + R +++VPTREL +Q ++ V+R L
Sbjct: 206 TGTGKSLVFLLP-------SVQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD--KSIVA 256
Query: 370 XXXXXXDVKYQESVLRQN---PDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 537
D+ QE +L+ + P IVI TP RL + ++ + +V+DE D+ L
Sbjct: 257 SFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRLWEIVQEHEHL-FQRTKRIVIDEVDKTL 314
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAK--- 258
+++ + L + PTPIQ IPI L +D+ + +P+L ++ K
Sbjct: 112 ILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIER 171
Query: 259 --GGDRITRVLVLVPTRELGAQV 321
D+ L+L PTREL Q+
Sbjct: 172 DNDADQGPYALILAPTRELAQQI 194
Score = 27.5 bits (58), Expect(2) = 2.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
RQT++F+ATM +V+ LA L+K + +N +
Sbjct: 263 RQTVMFTATMPPQVERLAKNYLRKKLLELLNKD 295
Score = 21.4 bits (43), Expect(2) = 2.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 505 VLVLDEADRMLDEYFAEQMKEII 573
V V+ ADRM+D F ++++I+
Sbjct: 210 VSVIGGADRMIDMGFEPEVQKIL 232
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 37.5 bits (83), Expect = 0.015
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 537
DIV TPG+L D I T LH ++ +LDEAD +L
Sbjct: 137 DIVTGTPGKLNDFI-TTDKISLHQVKFFILDEADGLL 172
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 36.7 bits (81), Expect = 0.026
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 496 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
SI++LVLDEAD ML++ F EQ+ ++ R P Q
Sbjct: 35 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.5 bits (73), Expect = 0.24
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 5/153 (3%)
Frame = +1
Query: 124 PTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERL----LYKAKGGDRITRVLVL 291
PT +Q P L G+DV Y+LPI+ ++ +Y+ VL+L
Sbjct: 210 PTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
Query: 292 VPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV-LRQNPDIVIATPGRLIDHI 468
+ A+V+ V L + + V L ++++ATP + +
Sbjct: 270 CTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVATPPCFLRML 329
Query: 469 RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 567
+ + L + +V D+AD ML EYF ++K+
Sbjct: 330 KRCYT-SLDRLCHVVFDDAD-MLAEYFTAEIKD 360
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 177
SF NL + + + PTP+Q +IPI + G+DV
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDV 174
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 547 FAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
F ++K+I+ P RQT++ SAT V+ +A + PV++FV
Sbjct: 3 FEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFV 47
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 547 FAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
F + I+ +R+T LFSAT ++EV+ L L+ PV++ V
Sbjct: 3 FEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV 47
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALL 165
+ ++ +++A+G F PTPIQ+ +IP ALL
Sbjct: 77 LGVAPDILRALGDQGFSKPTPIQSLSIPPALL 108
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 514 LDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEE 630
LDEAD+M+D YF E + ++ K ++++ +A S E
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDI--KNKSIIHAAFKSVE 424
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +1
Query: 268 RITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
R + LVL PTREL Q+ V L + ++ L IV TP
Sbjct: 2 REPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTP 61
Query: 448 GRL 456
GR+
Sbjct: 62 GRV 64
>SB_1880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
Q +LFSATM+ + LAA+ L P+ LF SN
Sbjct: 30 QKLLFSATMTHSPEKLAALQLYNPM-LFAVSN 60
>SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061)
Length = 337
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 595 QTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
Q +LFSATM+ + LAA+ L P+ LF SN
Sbjct: 293 QKLLFSATMTHSPEKLAALQLYNPM-LFAVSN 323
>SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 703 GHLXYWSSRTI*RVSSRKPPPG---P*LPRSWWPRTAWSDV*GN 581
GH+ R I +V+ R PPG P P++ W RT S++ G+
Sbjct: 51 GHVLRMDQRRIPKVALRWTPPGRRKPGRPKTTWRRTILSELSGH 94
>SB_9809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 466 IRNTPSFGLHSIEVLV-LDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKD 639
+R TP F L + + + +A R+LD A ++K +IR+ ++ + MSE D
Sbjct: 29 MRLTPGFNLIKVNAIADIKDAKRLLDLLLARKVKHVIREKKESKED--GKSDMSENFDD 85
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 413 STLS*YLTSNPPTDRPTDTDEN*ASCLVT-AWT*APSSLVGTSTRTL 276
ST + ++++ T PTDTDE AS + T T P S+ GT++ T+
Sbjct: 2783 STTAVRMSTDAATSIPTDTDEATASPMSTYGATAIPMSMDGTASATM 2829
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,191,539
Number of Sequences: 59808
Number of extensions: 595608
Number of successful extensions: 1599
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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