Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_K17
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   111   2e-26
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.78 
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     25   4.2  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   5.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  111 bits (268), Expect = 2e-26
 Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
 Frame = +1

Query: 28  EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 207
           E PP + E  SF    L   +M  +   ++  PTPIQ   IPI L G+D+          
Sbjct: 167 ENPPDHVE--SFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGK 224

Query: 208 XXXYMLPILERLLYKAKGGDRITR---VLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXX 378
              +MLP++  LL K    +  TR   ++++ PTREL  Q+H   R+ A           
Sbjct: 225 TAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSY 284

Query: 379 XXXDVKYQESVLRQNPDIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDEYFAE 555
               V++Q  ++R    +++ATPGRL+D I R   +F   ++  +VLDEADRMLD  F  
Sbjct: 285 GGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTF--ENVNFVVLDEADRMLDMGFLP 342

Query: 556 QMKEIIRQCS----PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLE 714
            +++++   +     +RQT++FSAT   E+++LA   L   + +FV    G    +E
Sbjct: 343 SIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACADVE 399


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 517 DEADRMLDEYFAEQMKEIIRQCSPKR 594
           D  D + +E  AE++KEI R  +PK+
Sbjct: 404 DPQDPVSEEELAEELKEIARSLNPKK 429


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 666 GFLQGNR----RQVLDFLAHGGREQHGLTFRGTLTDDLL-HLLREVF 541
           GF  G+R    ++V+D  AH    +   TF GT+T+ +  H L   F
Sbjct: 240 GFAPGSRAFLAQEVIDMGAHEAVRKFEYTFLGTVTEFMFSHYLGRAF 286


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 246 QETLQYGQHVCSRLTSASGG 187
           Q+  Q+GQH C R +   GG
Sbjct: 279 QQQQQHGQHCCCRGSHCGGG 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,262
Number of Sequences: 2352
Number of extensions: 19437
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)