Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K17
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 215 3e-56
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 129 3e-30
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 119 2e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 119 2e-27
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 118 4e-27
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 114 9e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 108 5e-24
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 101 7e-22
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 101 9e-22
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 101 9e-22
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 99 5e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 99 5e-21
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 96 3e-20
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 96 3e-20
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 93 3e-19
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 93 3e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 91 1e-18
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 88 7e-18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 88 7e-18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 88 7e-18
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 86 4e-17
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 86 4e-17
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 86 4e-17
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 86 4e-17
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 85 9e-17
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 85 9e-17
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 84 1e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 84 2e-16
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 84 2e-16
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 84 2e-16
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 81 8e-16
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 80 2e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 6e-15
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 73 3e-13
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 73 4e-13
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 70 2e-12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 70 2e-12
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 66 4e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 61 9e-10
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 55 8e-08
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 35 0.069
Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 30 2.0
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 30 2.0
AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical ... 30 2.0
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 215 bits (526), Expect = 3e-56
Identities = 118/244 (48%), Positives = 151/244 (61%), Gaps = 24/244 (9%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N SF MNLSR ++KA + PTPIQ A IP+AL GKD+ ++LPI
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
LER++Y+ KG TRVLVLVPTREL QV V R+L+ F D+K QE+
Sbjct: 207 LERMIYRPKGAS-CTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIE------------------------VLVLD 519
LR PD+V+ATPGRLIDH+ N+PSF L +IE VLVLD
Sbjct: 266 LRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLD 325
Query: 520 EADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGG 699
EADRML+E F +QM E+IR C+ RQT+LFSATM+EE+ +LA++SL+KPVK+F+N N
Sbjct: 326 EADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENTDT 385
Query: 700 GLQL 711
L+L
Sbjct: 386 ALKL 389
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 129 bits (311), Expect = 3e-30
Identities = 73/210 (34%), Positives = 113/210 (53%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + +S+PL A L ++ P+ IQ A +P AL GKDV + +P+L+
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
LL + LVL PTREL Q+ L D+ Q L
Sbjct: 105 SLLDHPQA----FFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+ P I++ATPGRL+DH+ NT F L +++ L++DEADR+L+ F ++ +I++ +R+
Sbjct: 161 RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERR 220
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
T LFSATM+++V L SL+ P ++ V+S
Sbjct: 221 TYLFSATMTKKVSKLERASLRDPARVSVSS 250
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 119 bits (287), Expect = 2e-27
Identities = 67/200 (33%), Positives = 105/200 (52%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
+ L + KAI F PTPIQ TIP + GKDV +++P+L++L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 250 KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPD 429
+ G R L++ PTREL Q V ++L +F ++ Q S + +NPD
Sbjct: 89 RDTTG---IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
I++ATPGRL+ H+ L ++ +V DEADR+ + F +Q+ E +++ RQT+LF
Sbjct: 146 ILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 610 SATMSEEVKDLAAVSLKKPV 669
SAT+ + + D A L P+
Sbjct: 205 SATLPKMLVDFAKAGLTDPM 224
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 119 bits (287), Expect = 2e-27
Identities = 67/200 (33%), Positives = 105/200 (52%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
+ L + KAI F PTPIQ TIP + GKDV +++P+L++L
Sbjct: 29 IGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR 88
Query: 250 KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPD 429
+ G R L++ PTREL Q V ++L +F ++ Q S + +NPD
Sbjct: 89 RDTTG---IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
I++ATPGRL+ H+ L ++ +V DEADR+ + F +Q+ E +++ RQT+LF
Sbjct: 146 ILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 610 SATMSEEVKDLAAVSLKKPV 669
SAT+ + + D A L P+
Sbjct: 205 SATLPKMLVDFAKAGLTDPM 224
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 118 bits (285), Expect = 4e-27
Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
L+KA+ L F T IQA +I L GKDV ++LP +E LL+K
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE-LLHKLNWKQ 137
Query: 268 RI-TRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIAT 444
T V+++ PTREL Q + V +L + + ++ L + I++AT
Sbjct: 138 HNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVAT 197
Query: 445 PGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMS 624
PGRL+DH++NT +F + +++ L++DEADR+LD F +M++++R +RQ+MLFSAT S
Sbjct: 198 PGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHS 257
Query: 625 EEVKDLAAVSL-KKPVKLFVN 684
+V +L ++L PV++ V+
Sbjct: 258 PKVDELVKLALHSNPVRVSVH 278
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 114 bits (274), Expect = 9e-26
Identities = 68/210 (32%), Positives = 101/210 (48%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + LS ++ + ++ PT IQ TI +L G DV ++P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 241 LLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ 420
L D L++ PTREL Q + + DV ++ + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI-S 196
Query: 421 NPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQT 600
+I++ TPGRL+ H+ S++VLVLDEADRMLD F++Q+ II +RQT
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 601 MLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
+LFSAT + VKDL V PV + V+ N
Sbjct: 257 LLFSATQTRNVKDLCRVCTNDPVFVSVHEN 286
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 108 bits (260), Expect = 5e-24
Identities = 73/192 (38%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Frame = +1
Query: 115 FVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKA-KGGDRITRVLVL 291
F PT IQ+ + PIA+ G+D+ +MLP L + +A + VLVL
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVL 208
Query: 292 VPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIR 471
+PTREL QV V+ Q L + DIV+ATPGRL+D +
Sbjct: 209 LPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLD 268
Query: 472 NTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAV 651
N + + LVLDEADRMLD F Q+K+II Q P RQT++FSAT +EV+ LA+
Sbjct: 269 NGTT-NMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASD 327
Query: 652 SLKKPVKLFVNS 687
K L V S
Sbjct: 328 FQKDAAFLNVGS 339
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 103 bits (247), Expect = 2e-22
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + + + LM+AI + PTPIQA IP AL G+DV Y+ P +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 238 RLLYKA--KGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
++ + K G+ V+V VPTREL QV ++ + K+++S
Sbjct: 326 HIMDQPDLKAGEGPVAVIV-VPTRELAIQVFQEAKKFCKVYNINPICAYGGGS-KWEQSN 383
Query: 412 LRQNP--DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
QN ++V+ TPGR+ID ++ + L + LV DEADRM D F Q+K I
Sbjct: 384 ELQNEGAEMVVCTPGRIIDLVKMGATNFLRTT-FLVFDEADRMFDMGFEAQVKSISDHVR 442
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
P RQ ++FSAT ++V+ LA +L PV++
Sbjct: 443 PDRQCLMFSATFKQKVERLARDALVDPVRI 472
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 101 bits (242), Expect = 7e-22
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAK--G 261
+M + + PT IQA IP + G+DV ++LP+ +L + +
Sbjct: 315 MMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEE 374
Query: 262 GDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIA 441
GD V +L PTREL Q + + A+ + Q + L++ +IV+
Sbjct: 375 GDGPIAV-ILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVC 433
Query: 442 TPGRLIDHIRNTPS--FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSA 615
TPGR+ID + L + LVLDEADRM D+ F Q+ +++ P +QT+LFSA
Sbjct: 434 TPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSA 493
Query: 616 TMSEEVKDLAAVSLKKPVKLFV 681
T ++ LA L KPV++ V
Sbjct: 494 TFPRHMEALARKVLDKPVEILV 515
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 101 bits (241), Expect = 9e-22
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Frame = +1
Query: 127 TPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRE 306
TP+QAA IP L G D+ + +PIL++L G L+L PTRE
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYG----IYALILTPTRE 168
Query: 307 LGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSF 486
L Q+ L + + +Q L + P +V+ATPGRL D I + P
Sbjct: 169 LAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDT 228
Query: 487 ---GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSL 657
I+ VLDEADRML+ + +Q+K I S KRQT+L SAT++ + L VS
Sbjct: 229 IAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVST 288
Query: 658 KKP 666
+KP
Sbjct: 289 RKP 291
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 101 bits (241), Expect = 9e-22
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Frame = +1
Query: 127 TPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRE 306
TP+QAA IP L G D+ + +PIL++L G L+L PTRE
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYG----IYALILTPTRE 168
Query: 307 LGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSF 486
L Q+ L + + +Q L + P +V+ATPGRL D I + P
Sbjct: 169 LAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDT 228
Query: 487 ---GLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSL 657
I+ VLDEADRML+ + +Q+K I S KRQT+L SAT++ + L VS
Sbjct: 229 IAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVST 288
Query: 658 KKP 666
+KP
Sbjct: 289 RKP 291
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 98.7 bits (235), Expect = 5e-21
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Frame = +1
Query: 43 YDENA-SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
YD+ SF +M L L++ I F P+ IQ I GKDV +
Sbjct: 24 YDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 220 MLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+ IL+R+ ++ D + LV+ PTREL Q+ V L ++ V+
Sbjct: 84 SVSILQRIDHE----DPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
+ L +V+ TPGR+ D I N + I++ VLDEAD ML F +Q+ E+ R
Sbjct: 140 DQRKLEAGIHVVVGTPGRVGDMI-NRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRS 198
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRE 729
Q +L SATM EV D+ ++ P+++ V + L LE G+R+
Sbjct: 199 MPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDE---LTLE-GIRQ 244
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 98.7 bits (235), Expect = 5e-21
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Frame = +1
Query: 43 YDENA-SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
YD+ SF +M L L++ I F P+ IQ I GKDV +
Sbjct: 24 YDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 220 MLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+ IL+R+ ++ D + LV+ PTREL Q+ V L ++ V+
Sbjct: 84 SVSILQRIDHE----DPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ 579
+ L +V+ TPGR+ D I N + I++ VLDEAD ML F +Q+ E+ R
Sbjct: 140 DQRKLEAGIHVVVGTPGRVGDMI-NRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRS 198
Query: 580 CSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRE 729
Q +L SATM EV D+ ++ P+++ V + L LE G+R+
Sbjct: 199 MPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDE---LTLE-GIRQ 244
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 96.3 bits (229), Expect = 3e-20
Identities = 62/219 (28%), Positives = 101/219 (46%)
Frame = +1
Query: 25 FEEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXX 204
FE + +F M L L++ I + F P+ IQ +P L +DV
Sbjct: 16 FESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTG 75
Query: 205 XXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXX 384
+ + +L+ L + R T+ L+L PTREL Q+ V L +
Sbjct: 76 KTATFSISVLQSLDTQV----RETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
Query: 385 XDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMK 564
++ L +V TPGR+ D IR + +I++LVLDEAD ML++ F EQ+
Sbjct: 132 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR-NLRTRAIKLLVLDEADEMLNKGFKEQLY 190
Query: 565 EIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+I R P Q +L SAT+ E+ ++ + + P+++ V
Sbjct: 191 DIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILV 229
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 95.9 bits (228), Expect = 3e-20
Identities = 61/208 (29%), Positives = 98/208 (47%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F M L L++ I + F P+ IQ IP L +DV + + +L+
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 238 RLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR 417
L + R T+ L+L PTREL Q+ V L + ++ L
Sbjct: 87 SLDTQV----RETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 418 QNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 597
+V TPGR+ D IR + +I++LVLDEAD ML++ F EQ+ +I R P Q
Sbjct: 143 YGQHVVSGTPGRVFDMIRRR-NLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQ 201
Query: 598 TMLFSATMSEEVKDLAAVSLKKPVKLFV 681
+L SAT+ E+ ++ + + P+++ V
Sbjct: 202 VVLLSATLPHEILEMTSKFMTDPIRILV 229
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 92.7 bits (220), Expect = 3e-19
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + ++ + + + + + TPIQ T+P+ GKD+ ++LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 238 RLL------YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
RL+ Y A+GG R ++L PTREL Q++ R+ + +V Y
Sbjct: 359 RLILEKDLNYGAEGG-CYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGY 417
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIR 576
+S + + I++ T GR + H + L LVLDEADRM+D F ++++II
Sbjct: 418 NKSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 577 ----QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXG 696
+ KRQTM+FSAT V++ A L++ + G
Sbjct: 477 YKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG 520
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 92.7 bits (220), Expect = 3e-19
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
SF + ++ + + + + + TPIQ T+P+ GKD+ ++LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 238 RLL------YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
RL+ Y A+GG R ++L PTREL Q++ R+ + +V Y
Sbjct: 359 RLILEKDLNYGAEGG-CYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGY 417
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIR 576
+S + + I++ T GR + H + L LVLDEADRM+D F ++++II
Sbjct: 418 NKSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 577 ----QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXG 696
+ KRQTM+FSAT V++ A L++ + G
Sbjct: 477 YKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG 520
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 91.1 bits (216), Expect = 1e-18
Identities = 59/209 (28%), Positives = 98/209 (46%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
+ F + L R L+ I + P+PIQ A+I +AL G+D+ Y +P
Sbjct: 41 KGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIP 100
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
++E++ K + +V+VPTREL Q + +L++ D++
Sbjct: 101 VIEKIQPALKA----IQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIM 156
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSP 588
L +VIATPGR++D + + H + LVLDEAD++L + F + +I
Sbjct: 157 RLNGTVHLVIATPGRILDLMEKGVAKMEHC-KTLVLDEADKLLSQDFQGILDRLINFLPK 215
Query: 589 KRQTMLFSATMSEEVKDLAAVSLKKPVKL 675
+RQ ML+SAT V + KP ++
Sbjct: 216 ERQVMLYSATFPNTVTSFMQKHMHKPYEI 244
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 88.2 bits (209), Expect = 7e-18
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
+M+ + + PTP+Q +IP L +D+ ++LPI++ +L A G D
Sbjct: 150 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL--AGGPD 207
Query: 268 RITR-------------VLVLVPTRELGAQVH-AVTRQLAQFXXXXXXXXXXXXDVKYQE 405
+ LVL PTREL Q+H T+ + + + Q
Sbjct: 208 MVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQV 267
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ LR I+IATPGRLID I GL LVLDEADRMLD F Q+++I+ Q
Sbjct: 268 NRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGM 326
Query: 586 P---KRQTMLFSATMSEEVKDLAAVSLK 660
P R T +FSAT +E++ LA LK
Sbjct: 327 PPKTARTTAMFSATFPKEIQVLAKDFLK 354
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 88.2 bits (209), Expect = 7e-18
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
+M+ + + PTP+Q +IP L +D+ ++LPI++ +L A G D
Sbjct: 134 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL--AGGPD 191
Query: 268 RITR-------------VLVLVPTRELGAQVH-AVTRQLAQFXXXXXXXXXXXXDVKYQE 405
+ LVL PTREL Q+H T+ + + + Q
Sbjct: 192 MVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQV 251
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ LR I+IATPGRLID I GL LVLDEADRMLD F Q+++I+ Q
Sbjct: 252 NRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGM 310
Query: 586 P---KRQTMLFSATMSEEVKDLAAVSLK 660
P R T +FSAT +E++ LA LK
Sbjct: 311 PPKTARTTAMFSATFPKEIQVLAKDFLK 338
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 88.2 bits (209), Expect = 7e-18
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Frame = +1
Query: 88 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGD 267
+M+ + + PTP+Q +IP L +D+ ++LPI++ +L A G D
Sbjct: 131 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHIL--AGGPD 188
Query: 268 RITR-------------VLVLVPTRELGAQVH-AVTRQLAQFXXXXXXXXXXXXDVKYQE 405
+ LVL PTREL Q+H T+ + + + Q
Sbjct: 189 MVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQV 248
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ LR I+IATPGRLID I GL LVLDEADRMLD F Q+++I+ Q
Sbjct: 249 NRLRAGTHILIATPGRLIDIIEQ-GFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGM 307
Query: 586 P---KRQTMLFSATMSEEVKDLAAVSLK 660
P R T +FSAT +E++ LA LK
Sbjct: 308 PPKTARTTAMFSATFPKEIQVLAKDFLK 335
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 85.8 bits (203), Expect = 4e-17
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL + K + + TPIQ T+P+ G D+ ++LPI+
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYN 672
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIR- 576
+ + + I++ T GR I H + L VLDEADRM+D F + I+
Sbjct: 673 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 577 QCSPK---RQTMLFSATMSEEVKDLAAVSLKK 663
+ PK RQT++FSAT + V++ A LK+
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAARNHLKE 763
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 85.8 bits (203), Expect = 4e-17
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL + K + + TPIQ T+P+ G D+ ++LPI+
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYN 672
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIR- 576
+ + + I++ T GR I H + L VLDEADRM+D F + I+
Sbjct: 673 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 577 QCSPK---RQTMLFSATMSEEVKDLAAVSLKK 663
+ PK RQT++FSAT + V++ A LK+
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAARNHLKE 763
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 85.8 bits (203), Expect = 4e-17
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLN-FVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 210
PPP SF M + L++ + V PT IQ IP+AL G+D+
Sbjct: 185 PPPI---GSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKT 241
Query: 211 XXYMLPI----LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQL------AQFXXX 360
++LP+ LE+ + L++VP+REL Q+ + ++ A
Sbjct: 242 MTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEM 301
Query: 361 XXXXXXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLD 540
+ Q +R IV+ATPGRL D + L LVLDEADRMLD
Sbjct: 302 RAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKK-IINLEVCRYLVLDEADRMLD 360
Query: 541 EYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQL 711
F +++K I +RQT+LFSATM +++ A +L KP+ VN G L
Sbjct: 361 MGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPI--VVNVGRAGAASL 415
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 85.8 bits (203), Expect = 4e-17
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL + K + + TPIQ T+P+ G D+ ++LPI+
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYN 672
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIR- 576
+ + + I++ T GR I H + L VLDEADRM+D F + I+
Sbjct: 673 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 577 QCSPK---RQTMLFSATMSEEVKDLAAVSLKK 663
+ PK RQT++FSAT + V++ A LK+
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAARNHLKE 763
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 84.6 bits (200), Expect = 9e-17
Identities = 53/213 (24%), Positives = 100/213 (46%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N +F ++ + + ++ + + F P+P+QA IP+ LLG+D+ + +
Sbjct: 21 NCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLA 80
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
+E L ++ I +V+V PTRE+ Q+ R++A +
Sbjct: 81 VENLDSRSS---HIQKVIV-TPTREISVQIKETVRKVAPTGARTSVYVGGSAHKLNLIDL 136
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
+ P IVI TPGR+ ++ + + ++ VLDEAD+++DE F + + II
Sbjct: 137 KQTRPQIVIGTPGRIAQLVK-LGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQI 195
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
RQ +FSAT + +L + L+ + N++
Sbjct: 196 RQVAVFSATYPRNLDNLLSTFLRDAALVRFNAD 228
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 84.6 bits (200), Expect = 9e-17
Identities = 53/213 (24%), Positives = 100/213 (46%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
N +F ++ + + ++ + + F P+P+QA IP+ LLG+D+ + +
Sbjct: 21 NCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLA 80
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV 411
+E L ++ I +V+V PTRE+ Q+ R++A +
Sbjct: 81 VENLDSRSS---HIQKVIV-TPTREISVQIKETVRKVAPTGARTSVYVGGSAHKLNLIDL 136
Query: 412 LRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPK 591
+ P IVI TPGR+ ++ + + ++ VLDEAD+++DE F + + II
Sbjct: 137 KQTRPQIVIGTPGRIAQLVK-LGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQI 195
Query: 592 RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNSN 690
RQ +FSAT + +L + L+ + N++
Sbjct: 196 RQVAVFSATYPRNLDNLLSTFLRDAALVRFNAD 228
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 84.2 bits (199), Expect = 1e-16
Identities = 69/219 (31%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Frame = +1
Query: 34 PPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXX 213
PPP + + N S +M I F P+PIQ+ P+ L G+D
Sbjct: 79 PPPVNSFEQAFGSNAS--IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTL 136
Query: 214 XYMLPILERL---LYKAKGGDRITR----VLVLVPTRELGAQVHAVTRQLAQFXXXXXXX 372
++LP L + L + + D + VLVL PTREL Q+ ++ + +
Sbjct: 137 AFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS-YNGYKSVC 195
Query: 373 XXXXXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 552
Q R +IVIATPGRL D + N L S+ +VLDEADRMLD F
Sbjct: 196 LYGGGSRPEQVEACRGGVEIVIATPGRLTD-LSNDGVISLASVTYVVLDEADRMLDMGFE 254
Query: 553 EQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
++ I+ + P R L SAT E V+ L K+ V
Sbjct: 255 VAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAV 293
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 83.8 bits (198), Expect = 2e-16
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL+ + K + + TPIQ +P+ G D+ ++LPI+
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYN 461
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQ 579
+ + + I++ T GR I H + L VLDEADRM+D F ++ I+
Sbjct: 462 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 580 CS-PK---RQTMLFSATMSEEVKDLAAVSLKK 663
S P+ RQT++FSAT + V++ A L++
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 83.8 bits (198), Expect = 2e-16
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL+ + K + + TPIQ +P+ G D+ ++LPI+
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYN 461
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQ 579
+ + + I++ T GR I H + L VLDEADRM+D F ++ I+
Sbjct: 462 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 580 CS-PK---RQTMLFSATMSEEVKDLAAVSLKK 663
S P+ RQT++FSAT + V++ A L++
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 83.8 bits (198), Expect = 2e-16
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F NL+ + K + + TPIQ +P+ G D+ ++LPI+
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMT 401
Query: 238 RL-----LYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
RL L A G R ++L PTREL Q++ R+ A V Y
Sbjct: 402 RLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYN 461
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQ 579
+ + + I++ T GR I H + L VLDEADRM+D F ++ I+
Sbjct: 462 KGQIEKGATIIVGTVGR-IKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 580 CS-PK---RQTMLFSATMSEEVKDLAAVSLKK 663
S P+ RQT++FSAT + V++ A L++
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 83.0 bits (196), Expect = 3e-16
Identities = 53/214 (24%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++ F + L +++AIG F HP+ +Q IP A+LG DV +++
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV--KYQE 405
L++L + D V+ + TREL Q+ + +++ K +E
Sbjct: 100 LQQL----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEE 155
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML-DEYFAEQMKEIIRQC 582
+ P IV+ TPGR++ + + L ++ VLDE D+M+ D ++EI++
Sbjct: 156 RLANDCPHIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMT 214
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
++Q M+FSAT+ +E++ + ++ P++++V+
Sbjct: 215 PQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVD 248
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 81.4 bits (192), Expect = 8e-16
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F +++L + + I + + PTP+Q +IP G+D+ +++P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 241 LLYK----------AKGGDR--ITRVLVLVPTRELGAQVHAVTRQLA-QFXXXXXXXXXX 381
+L + GG + LVL PTREL Q+ +R+ A +
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 382 XXDVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
+ K Q LR I+IATPGRLID + + G+ LVLDEADRMLD F Q+
Sbjct: 288 RENYKDQIHKLRLGCHILIATPGRLID-VMDQGLIGMEGCRYLVLDEADRMLDMGFEPQI 346
Query: 562 KEIIRQCS-----PKRQTMLFSATMSEEVKDLAAVSLKK 663
++I+ +C+ +R T +FSAT +E++ LA LK+
Sbjct: 347 RQIV-ECNRMPSKEERITAMFSATFPKEIQLLAQDFLKE 384
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 79.8 bits (188), Expect = 2e-15
Identities = 48/209 (22%), Positives = 101/209 (48%), Gaps = 2/209 (0%)
Frame = +1
Query: 49 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 228
E+ +F + L ++K+IG L + +Q + I +AL K++ +++P
Sbjct: 87 EHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIP 146
Query: 229 ILERLLYKAKGGDRIT--RVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQ 402
++++L+ ++K D +++ PT+EL Q++ + +L+Q + +
Sbjct: 147 LVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEEN 206
Query: 403 ESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC 582
L +V+ TPG+L+ P + + LV+DEAD +L + E+M +I +
Sbjct: 207 SVWLEDRSHVVVTTPGKLLRMCSLRPEY-CTLVSYLVMDEADLLLSFGYEEEMIKIRSKL 265
Query: 583 SPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
P Q ++ SAT+ +++ L + + PV
Sbjct: 266 PPTYQCLMTSATLKDDMTTLKKLFMTGPV 294
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 78.6 bits (185), Expect = 6e-15
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Frame = +1
Query: 94 KAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERL-----LYKAK 258
+A+ + ++ PTPIQ IPI L +DV ++LP+L + + + +
Sbjct: 314 QAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQE 373
Query: 259 GGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVI 438
D +++ PTREL Q+ T + + + Q LR ++VI
Sbjct: 374 HRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVI 433
Query: 439 ATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLD-----------EYFAE-QMKE----- 567
ATPGRL+D + N L+ ++LDEADRMLD EY + MK+
Sbjct: 434 ATPGRLLDVLENRYLL-LNQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEF 492
Query: 568 -----IIRQCSPK---RQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 687
+++ S + RQT++F+ATMS ++ LA L++P + + S
Sbjct: 493 DNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGS 540
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 77.4 bits (182), Expect = 1e-14
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 3/198 (1%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++ F + L +++AIG F HP+ +Q IP A+LG DV +++
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV--KYQE 405
L++L + D V+ + TREL Q+ + +++ K +E
Sbjct: 100 LQQL----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEE 155
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML-DEYFAEQMKEIIRQC 582
+ P IV+ TPGR++ + + L ++ VLDE D+M+ D ++EI++
Sbjct: 156 RLANDCPHIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMT 214
Query: 583 SPKRQTMLFSATMSEEVK 636
++Q M+FSAT+ +E++
Sbjct: 215 PQQKQVMMFSATLPKELR 232
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 76.6 bits (180), Expect = 2e-14
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 19/238 (7%)
Frame = +1
Query: 76 LSRPLMKAIGSLNFVHPTPIQAATIPIALLGK-DVXXXXXXXXXXXXXYMLPILERLLYK 252
L +++AI + F PT IQ+A +P A+ + DV + +P++ RLL
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 253 AKGGD-------RITRVLVLVPTRELGAQVHA-VTRQLAQFXXXXXXXXXXXXDVKYQES 408
+ R R L++ PTREL Q+ + ++ VK +
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERI 281
Query: 409 VLRQNPDIVIATPGRLIDHIR--NTPSF--GLHSIEVLVLDEADRMLDE-YFAE--QMKE 567
+ +Q PDIV+ATPGRL ++ T F ++ LV+DE DRM++E YFAE +
Sbjct: 282 ISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILN 341
Query: 568 IIRQCSPKR--QTMLFSATMS-EEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRED 732
I + S K QT++FSAT++ + +D+A KK +L ++L G+RE+
Sbjct: 342 KIHEESEKEKLQTLVFSATLTFAKAQDVAEEEKKKAKELSSQQKIQRLIKL-TGLREN 398
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 72.9 bits (171), Expect = 3e-13
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Frame = +1
Query: 52 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
++ F + L +++AIG F HP+ +Q IP A+LG DV +++
Sbjct: 39 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 98
Query: 232 LERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDV--KYQE 405
L++L + D V+ + TREL Q+ + +++ K +E
Sbjct: 99 LQQL----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEE 154
Query: 406 SVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS 585
+ P IV+ TPGR++ + + L ++ VLDE D+M+ + ++ R
Sbjct: 155 RLANDCPHIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMIGD------ADMRRDVQ 207
Query: 586 PKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVN 684
+Q M+FSAT+ +E++ + ++ P++++V+
Sbjct: 208 EIKQVMMFSATLPKELRTVCKRFMQDPMEVYVD 240
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 72.5 bits (170), Expect = 4e-13
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Frame = +1
Query: 217 YMLPILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
++LP++ R++ AK L+L P+REL +Q+ +V + A+ V
Sbjct: 63 FVLPMM-RMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVD 121
Query: 397 YQESVLR-QNPDIVIATPGRL---IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMK 564
+ + +N +I++ATPGRL I H + + + ++++LV+DEADR + F + M+
Sbjct: 122 KNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMR 181
Query: 565 EIIRQCSPK-RQTMLFSATMSEEVKDLAAVSLK--KPVKLFVNSN 690
EI+ C PK R+T LFSAT +E DL L+ K VK+ N
Sbjct: 182 EIL-SCIPKQRRTGLFSATQVKEEDDLMVFGLRNAKQVKVAQERN 225
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 70.9 bits (166), Expect = 1e-12
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Frame = +1
Query: 115 FVHPTPIQAATIPIALLGK-DVXXXXXXXXXXXXXYMLPILERLLYKAKGGD-------R 270
F PT IQ+A +P A+ + DV + +P++ RLL + R
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 271 ITRVLVLVPTRELGAQVHA-VTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATP 447
R L++ PTREL Q+ + ++ VK + + +Q PDIV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 448 GRLIDHIR--NTPSF--GLHSIEVLVLDEADRMLDE-YFAE--QMKEIIRQCSPKR--QT 600
GRL ++ T F ++ LV+DE DRM++E YFAE + I + S K QT
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQT 187
Query: 601 MLFSATMS-EEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRED 732
++FSAT++ + +D+A KK +L ++L G+RE+
Sbjct: 188 LVFSATLTFAKAQDVAEEEKKKAKELSSQQKIQRLIKL-TGLREN 231
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 70.1 bits (164), Expect = 2e-12
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Frame = +1
Query: 124 PTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRIT------RVL 285
PTPIQ A+ + G DV +++P + +L+ + + +T R+L
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLL 818
Query: 286 VLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ--NPDIVIATPGRLI 459
++ PTREL Q RQL LR +I++AT GRL
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQ 878
Query: 460 DHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCSPK-RQTMLFSATMSEEV 633
D + N L ++ +VLDEADRM+D F E++ +II + +QT+LFSA+ SE
Sbjct: 879 DFV-NAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSE-- 935
Query: 634 KDLAAVSLKKPVK 672
DL + L K VK
Sbjct: 936 -DLQSDDLPKFVK 947
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 70.1 bits (164), Expect = 2e-12
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Frame = +1
Query: 124 PTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRIT------RVL 285
PTPIQ A+ + G DV +++P + +L+ + + +T R+L
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLL 818
Query: 286 VLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ--NPDIVIATPGRLI 459
++ PTREL Q RQL LR +I++AT GRL
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQ 878
Query: 460 DHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCSPK-RQTMLFSATMSEEV 633
D + N L ++ +VLDEADRM+D F E++ +II + +QT+LFSA+ SE
Sbjct: 879 DFV-NAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSE-- 935
Query: 634 KDLAAVSLKKPVK 672
DL + L K VK
Sbjct: 936 -DLQSDDLPKFVK 947
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 68.1 bits (159), Expect = 8e-12
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
S+ N L +++ + + + + IQ A IP L G DV + LPI++
Sbjct: 382 SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIID 441
Query: 238 RLLY-------KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK 396
++L KA+ D L+L PTREL AQ+H R Q D
Sbjct: 442 KILRMDEETRNKARQDDG-PLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRA 500
Query: 397 YQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI-- 570
+ +R DI+I T GR++D + LH + LV DEADR+L + + + +
Sbjct: 501 RSLNEIRNGCDILIGTCGRIMDFTVKSHISLLH-LRFLVFDEADRLLQDMKKDPLGHLGA 559
Query: 571 ------IRQCSPKRQTMLFSATMSEEVKDLAAVSLKK 663
+ + RQT++ SAT + V +A +K+
Sbjct: 560 IIKDAGFMESAATRQTIMTSATFNASVMTVANELMKR 596
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 65.7 bits (153), Expect = 4e-11
Identities = 57/220 (25%), Positives = 96/220 (43%)
Frame = +1
Query: 70 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERLLY 249
M L L++ I F P+ IQ + + GKDV ++ IL+ +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 250 KAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPD 429
+ D +V++L P R + + H + L + D + +
Sbjct: 61 E----DAHLQVILLAPQRGMAQRAHEQLKSLGR--NLNVNATCLGFDTTAENDKISH--- 111
Query: 430 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 609
+++ TP D + N PS I++ VLDEAD ML + F +Q+ E+ R Q +L
Sbjct: 112 VLMGTPK---DFLSNIPS-DTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLL 167
Query: 610 SATMSEEVKDLAAVSLKKPVKLFVNSNXGGGLQLEAGVRE 729
SATM EV D+ ++ P+++ V + L LE G+R+
Sbjct: 168 SATMPSEVLDVTNRFMRDPIRILVKKDE---LTLE-GIRQ 203
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 63.3 bits (147), Expect = 2e-10
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Frame = +1
Query: 61 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
F + ++S L+ + + P+PIQ +IP ++V + LP+++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 241 LL-------YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY 399
+L Y + ++ V VL PTREL AQ + +F +
Sbjct: 188 ILELKQRADYSSSNSSKLLAV-VLEPTRELAAQTY------TEFLKYCANTSISAANFSG 240
Query: 400 QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML------DEYFAEQM 561
+E+ + Q+ DI+++TP R++ H+ S+ LV+DE+DR+ D+ F Q+
Sbjct: 241 EETDI-QHADILVSTPNRIVFHL---DKIDTSSLRWLVVDESDRLFEVVEGQDKCFRNQL 296
Query: 562 KEIIRQCSPK-RQTMLFSATMSEEVK 636
I + C K + FSAT S EV+
Sbjct: 297 AAIYKACDAKCTRVAFFSATFSHEVE 322
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 61.3 bits (142), Expect = 9e-10
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLG--KDVXXXXXXXXXXXXXYMLP 228
+SF + L ++KA+ ++NF PT IQ +P+ L+ ++ ++L
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+L R+ + + L PT EL Q+ V ++ +F
Sbjct: 269 MLCRIDVNLM----CPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMR 324
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML-DEYFAE---QMKEIIR 576
+ IVI TPG D+++ I LVLDEAD M+ + F + + ++
Sbjct: 325 GRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVE 384
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
S Q+MLFSAT E V + A +K +
Sbjct: 385 DASDSVQSMLFSATYDEPVINFATKIIKNAI 415
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 61.3 bits (142), Expect = 9e-10
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLG--KDVXXXXXXXXXXXXXYMLP 228
+SF + L ++KA+ ++NF PT IQ +P+ L+ ++ ++L
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+L R+ + + L PT EL Q+ V ++ +F
Sbjct: 294 MLCRIDVNLM----CPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMR 349
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML-DEYFAE---QMKEIIR 576
+ IVI TPG D+++ I LVLDEAD M+ + F + + ++
Sbjct: 350 GRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVE 409
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
S Q+MLFSAT E V + A +K +
Sbjct: 410 DASDSVQSMLFSATYDEPVINFATKIIKNAI 440
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 61.3 bits (142), Expect = 9e-10
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Frame = +1
Query: 55 ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLG--KDVXXXXXXXXXXXXXYMLP 228
+SF + L ++KA+ ++NF PT IQ +P+ L+ ++ ++L
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 229 ILERLLYKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQES 408
+L R+ + + L PT EL Q+ V ++ +F
Sbjct: 678 MLCRIDVNLM----CPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMR 733
Query: 409 VLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML-DEYFAE---QMKEIIR 576
+ IVI TPG D+++ I LVLDEAD M+ + F + + ++
Sbjct: 734 GRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVE 793
Query: 577 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPV 669
S Q+MLFSAT E V + A +K +
Sbjct: 794 DASDSVQSMLFSATYDEPVINFATKIIKNAI 824
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 54.8 bits (126), Expect = 8e-08
Identities = 34/141 (24%), Positives = 66/141 (46%)
Frame = +1
Query: 247 YKAKGGDRITRVLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNP 426
+K G +++ PT+EL Q++ + +L+Q + + L
Sbjct: 88 HKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRS 147
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTML 606
+V+ TPG+L+ P + + LV+DEAD +L + E+M +I + P Q ++
Sbjct: 148 HVVVTTPGKLLRMCSLRPEY-CTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLM 206
Query: 607 FSATMSEEVKDLAAVSLKKPV 669
SAT+ +++ L + + PV
Sbjct: 207 TSATLKDDMTTLKKLFMTGPV 227
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 52.4 bits (120), Expect = 4e-07
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Frame = +1
Query: 151 PIALLGKDVXXXXXXXXXXXXXYMLPILERLLYKAKGGDRITRVLVLVPTRELGAQ-VHA 327
P L +DV Y+LP+L + K +I + ++LVP + L AQ V
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPS---KILQAVILVPVQTLVAQIVDE 207
Query: 328 VTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNP-DIVIATPGRLIDHIRN--TPSFGLHS 498
R + D + + L +P ++++ATP RL+ H+ + P L
Sbjct: 208 FKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSK 267
Query: 499 IEVLVLDEADRM----------LDEYFAEQM------KEIIRQCSPKRQTMLFSATMSEE 630
+ L++DEADRM L E+ M K+IIRQ Q ++ SAT+S++
Sbjct: 268 LRFLIVDEADRMGKLMREEWLDLVEFLCGGMERVACLKDIIRQ-RRAPQKIVLSATLSKD 326
Query: 631 VKDLAAVSLKKPVKLF 678
V++L +L KP +LF
Sbjct: 327 VEELHLWNLFKP-RLF 341
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 35.1 bits (77), Expect = 0.069
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Frame = +1
Query: 283 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ---NPDIVIATPGR 453
++L PTREL Q + A + +LR DIV+ TP R
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSR 344
Query: 454 LIDHIRNTPSFGLHSIEVLVLDEADRML--DEYFAEQMKEIIR------QCSPKRQTMLF 609
+ D I +T +++ +V+DE D+ L A Q++ I R Q +RQ +
Sbjct: 345 VFDLI-HTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVLPLVAQDGTRRQVIAC 403
Query: 610 SATM 621
SAT+
Sbjct: 404 SATL 407
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 58 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
+F + L A+ SLN+ PT +Q+ IP L G D + LPI +
Sbjct: 3 AFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Query: 238 RLLYKAKGGDR 270
+ + K ++
Sbjct: 63 IVWERRKSAEK 73
>Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 397 YQESVLRQNPDI----VIATPGRLI-DHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
++E V NP I V+ T G++I D ++ FG HS+ +++ DE M+ F++
Sbjct: 217 FEEIVDWGNPSIPSVDVVYTYGQVIHDETKDNEKFGEHSVALMINDEDGTMIRMDFSKMT 276
Query: 562 KEI 570
++I
Sbjct: 277 EDI 279
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE-YFAEQMKEIIRQCSPKR--- 594
DI T G+L I L +++ ++LDEAD+M+D F + I+ Q +
Sbjct: 125 DIAFCTIGKLKATIE-CGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLEN 183
Query: 595 -QTMLFSATMSEEVKDLAAVSL 657
Q+ FSAT ++ A+++
Sbjct: 184 LQSCFFSATYNKNANGTIALTV 205
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 427 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE-YFAEQMKEIIRQCSPKR--- 594
DI T G+L I L +++ ++LDEAD+M+D F + I+ Q +
Sbjct: 225 DIAFCTIGKLKATIE-CGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLEN 283
Query: 595 -QTMLFSATMSEEVKDLAAVSL 657
Q+ FSAT ++ A+++
Sbjct: 284 LQSCFFSATYNKNANGTIALTV 305
>AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 397 YQESVLRQNPDI----VIATPGRLI-DHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQM 561
++E V NP I V+ T G++I D ++ FG HS+ +++ DE M+ F++
Sbjct: 217 FEEIVDWGNPSIPSVDVVYTYGQVIHDETKDNEKFGEHSVALMINDEDGTMIRMDFSKMT 276
Query: 562 KEI 570
++I
Sbjct: 277 EDI 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,376
Number of Sequences: 27780
Number of extensions: 423757
Number of successful extensions: 1255
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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