Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_K15
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042050-1|AAH42050.1|  453|Homo sapiens CHMP family, member 7 p...    49   2e-05
BC019110-1|AAH19110.1|  453|Homo sapiens CHMP family, member 7 p...    49   2e-05
BC004344-1|AAH04344.1|  411|Homo sapiens CHMP7 protein protein.        48   6e-05

>BC042050-1|AAH42050.1|  453|Homo sapiens CHMP family, member 7
           protein.
          Length = 453

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 41/85 (48%)
 Frame = +2

Query: 209 RLKTTNPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMF 388
           R +  N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ 
Sbjct: 40  RSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLL 99

Query: 389 RSGELCPISKYQRILHNGTEGWVRW 463
           R GEL   S +   + +    W+ W
Sbjct: 100 RRGELQRESDFMASVDS---SWISW 121


>BC019110-1|AAH19110.1|  453|Homo sapiens CHMP family, member 7
           protein.
          Length = 453

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 41/85 (48%)
 Frame = +2

Query: 209 RLKTTNPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMF 388
           R +  N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ 
Sbjct: 40  RSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLL 99

Query: 389 RSGELCPISKYQRILHNGTEGWVRW 463
           R GEL   S +   + +    W+ W
Sbjct: 100 RRGELQRESDFMASVDS---SWISW 121


>BC004344-1|AAH04344.1|  411|Homo sapiens CHMP7 protein protein.
          Length = 411

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 24/80 (30%), Positives = 39/80 (48%)
 Frame = +2

Query: 224 NPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMFRSGEL 403
           N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ R GEL
Sbjct: 3   NSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGEL 62

Query: 404 CPISKYQRILHNGTEGWVRW 463
              S +   + +    W+ W
Sbjct: 63  QRESDFMASVDS---SWISW 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,829,761
Number of Sequences: 237096
Number of extensions: 2269467
Number of successful extensions: 4513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4513
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)