Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K10
(850 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 56 3e-08
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 3e-08
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 3e-07
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 47 2e-05
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 5e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 5e-04
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 42 6e-04
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.003
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.003
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 40 0.003
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.006
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 38 0.008
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 38 0.008
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 38 0.008
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.010
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.024
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.68
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.6
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 30 2.1
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 29 3.6
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.8
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 29 4.8
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.8
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 28 8.3
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 207 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 383
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 384 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQVRF 545
N+A + +R +++ G V W+ L + T M + ++P D Q C ++RF
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQAC--ELRF 134
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 56.4 bits (130), Expect = 3e-08
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Frame = +3
Query: 135 PSXIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKR 299
P+ + LL Y +++ P + + + L + LR ++ E + + I ++ W D
Sbjct: 33 PALLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHL 92
Query: 300 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWI 458
L WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 93 LKWNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWL 152
Query: 459 KRLDISTPISMQLDNWPNDMQTC 527
I + + + +P D+Q+C
Sbjct: 153 APAIIKSECKIDVRFFPFDVQSC 175
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 135 PSXIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKR 299
P+ ++ L Y +++ P D + + L + LR ++ E E + ++ W D
Sbjct: 451 PALLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHF 510
Query: 300 LSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L WN ++ G + +++ +++W+PDV+L N
Sbjct: 511 LQWNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 449
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
W+ ++T + + +P D Q+CT +
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +3
Query: 225 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 398
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 399 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
++G+ + + + ++G+V W+ + + + + + N+P D Q C +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLE 307
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +3
Query: 252 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 422
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 423 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
V +NG V W+ + + + M + ++P D Q C
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYC 129
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 431
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 432 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
S++GS +W+ I T + + +P D+Q C
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYC 117
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +3
Query: 216 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 389
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 390 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
T AG Y S++G+ W ++ ++ + +P D Q C+ +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 153 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 317
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 318 EW-GCSTWLVSSERLWRPDVVLLNAA 392
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 446
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCT 530
V WI + ++ ++++ WP D Q CT
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Frame = +3
Query: 258 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 410
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 411 ----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
Y + + +NG SW+ + + +P D Q CT +
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 279 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 437
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
NG W +I + ++ + +P D Q C
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFC 153
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 42.3 bits (95), Expect = 5e-04
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Frame = +3
Query: 105 RQNAKTQHHCPSXIDSLLATYDRESPPDS---KIVVNLTLHLRHANIRESESTVRILADL 275
RQ+ KT I R S PD ++VV+L + + +++ ++ I L
Sbjct: 46 RQDNKTIDEVVEYIQHNYNKVRRPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYL 104
Query: 276 QMNWIDKRLSWNAGEW-GCSTWLVSS----ERLWRPDVVLLNAAATTAG--DYAL---RA 425
+ W D L +N +++ + +++W+PD L N AG D +L
Sbjct: 105 RQTWHDPLLRYNKSSLVNAASYATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGF 164
Query: 426 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
RV NG+V++ R+ + M+ N+P D Q+C
Sbjct: 165 RVYPNGNVTFSTRISATLSCKMEFRNFPMDRQSC 198
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 437
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+G+V W+ I + + + +P D Q C
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 255 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 419
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 420 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+S +GS +W + + + +P D QTC
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTC 134
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 449
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
W+ + S+ ++++ +P D Q C+ +
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 437
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+G+ +W+ +T + + +P D Q C
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQEC 133
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 440
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G + W + T + + +P D QTC
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 434
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 435 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
N G W + + SM L WP D QTC +
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 440
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQ 521
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSN 437
+ + W + L+W+ +G T + V R+WRPD++L NA T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+GS W+ + + + +P D Q+C
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSC 164
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +3
Query: 285 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 443
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 444 SVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V W+ ++ +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 38.3 bits (85), Expect = 0.008
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Frame = +3
Query: 129 HCPSXIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDK 296
H + +L YD+ S P + VN+++ ++ + I+ES + L+ W D
Sbjct: 72 HATRVLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDP 131
Query: 297 RLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDIS 476
RL+ S +W PD NA + + NG + + R +
Sbjct: 132 RLAHGYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVK 190
Query: 477 TPISMQLDNWPNDMQTCT 530
M L N+P D+Q C+
Sbjct: 191 GACQMDLFNFPLDVQRCS 208
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 252 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 386
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++MNW + L WNA E+G L +S +W PD+VL N
Sbjct: 84 VRMNWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 446
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTC 527
V + + I+ M+L ++P D Q C
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQC 95
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 368
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 369 DVVLLN 386
D+VL N
Sbjct: 127 DIVLYN 132
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 380
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Frame = +3
Query: 144 IDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN 311
+D L ++ D+ P +VV + +++ + I + +++ + W D RL+++
Sbjct: 51 LDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQTWHDPRLAFD 110
Query: 312 AGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSVSWIKRLDIS 476
E + +W PD + N ++T +Y L + NG+ R+ ++
Sbjct: 111 LPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTTYLSMRISLT 167
Query: 477 TPISMQLDNWPNDMQTCTFQV 539
M L +P D QTC +
Sbjct: 168 GICPMDLRKYPMDTQTCYLNI 188
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
Query: 528 TFQV 539
+
Sbjct: 98 NLSI 101
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 386
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 521
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 522 TC 527
C
Sbjct: 92 VC 93
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 426 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
R+ NG++ + RL +++ M L N+P D Q C ++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKM 101
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 333 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 443
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 165 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 329
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 330 STWLVSSERLWRPDVVLLNAAA 395
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 165 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 329
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 330 STWLVSSERLWRPDVVLLNAAA 395
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 386
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 264 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 108 QNAKTQHHCPSXIDSLLATYDRESPP 185
Q AK HH PS I + Y+ +SPP
Sbjct: 23 QQAKYTHHHPSIIFVFVLLYEADSPP 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,030,231
Number of Sequences: 59808
Number of extensions: 509903
Number of successful extensions: 1351
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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