Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K10
(850 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 53 3e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 4e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 4e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 5e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 9e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 9e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.010
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.013
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.094
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.29
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 8.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 8.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 55.2 bits (127), Expect = 7e-10
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Frame = +3
Query: 147 DSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLS 305
D LL+ Y+R P S +VV L L L N+++ T + L+ W D +
Sbjct: 26 DDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQ 83
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDIST 479
W+ E+G T L V SE +W PD+VL N A G + +A + G V W +
Sbjct: 84 WDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKS 143
Query: 480 PISMQLDNWPNDMQTC 527
+ + +P D QTC
Sbjct: 144 SCEIDVRYFPFDQQTC 159
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Frame = +3
Query: 144 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 311
+D+LL YD PD V + + +R I E + T + + +W+D+RL++
Sbjct: 10 LDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRLAFQ 69
Query: 312 AGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTP 482
G+ + + R+W+PD N + T R+ +G V + RL I
Sbjct: 70 GGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAG 129
Query: 483 ISMQLDNWPNDMQTCTFQ 536
M L+N+P D Q C Q
Sbjct: 130 CPMNLENFPMDTQRCPLQ 147
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Frame = +3
Query: 147 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 311
D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 312 AGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIS 476
E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYK 150
Query: 477 TPISMQLDNWPNDMQTCTFQV 539
+ S+ ++ +P D+QTC ++
Sbjct: 151 SSCSIDVEFFPYDVQTCVLKL 171
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 53.6 bits (123), Expect = 2e-09
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Frame = +3
Query: 147 DSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKRLS 305
D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +L
Sbjct: 30 DDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLK 87
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 479
W+ E+G L V S+ +WRPD+VL NA A +A ++ G V W +
Sbjct: 88 WDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKS 147
Query: 480 PISMQLDNWPNDMQTCTFQ 536
+ ++ +P D QTC +
Sbjct: 148 SCEIDVEYFPFDEQTCVMK 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.2 bits (122), Expect = 3e-09
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = +3
Query: 147 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 311
D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 312 AGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPI 485
E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSC 153
Query: 486 SMQLDNWPNDMQTCTFQ 536
+ ++ +P D QTC +
Sbjct: 154 EIDVEYFPFDEQTCVLK 170
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.0 bits (119), Expect = 7e-09
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Frame = +3
Query: 147 DSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLSWN 311
D LL+ Y+R P LT L L+ + + E +++ ++ W D +L WN
Sbjct: 39 DDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLKWN 98
Query: 312 AGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDIS 476
E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 99 PEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYK 155
Query: 477 TPISMQLDNWPNDMQTC 527
+ + ++ +P D Q+C
Sbjct: 156 SSCEINVEYFPFDEQSC 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.6 bits (118), Expect = 9e-09
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Frame = +3
Query: 147 DSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKRLS 305
D LL+ Y+R P ++ V + L L N++ T + ++ W D +L
Sbjct: 26 DDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLK 83
Query: 306 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 470
WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 84 WNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAI 140
Query: 471 ISTPISMQLDNWPNDMQTC 527
+ + ++ +P D QTC
Sbjct: 141 YKSFCEIDVEYFPFDEQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.0 bits (114), Expect = 3e-08
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 153 LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 323
L YDR+ P+ K ++ L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 324 GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQL 497
++ V S +W PD+V+ + + ++ V N+G++ + TP+ +
Sbjct: 104 SINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEY 161
Query: 498 DN--WPNDMQTCTFQV 539
D+ WP D+ CT +
Sbjct: 162 DHTWWPYDILNCTIHI 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
+L N A + VS+ G V W+ + + ++ +P D Q C +
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Frame = +3
Query: 144 IDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSW 308
+++LL Y+ P + VV + +R + E + + + +W D RLS+
Sbjct: 41 LENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSF 100
Query: 309 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDIST 479
S + ER+WRPD N + + R+S +G + + RL I
Sbjct: 101 LGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKA 160
Query: 480 PISMQLDNWPNDMQTC 527
M+L N+P D Q+C
Sbjct: 161 KCPMELRNFPMDRQSC 176
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 3e-07
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTC 527
++ + + + +P D Q C
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Frame = +3
Query: 144 IDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRL 302
+D++L YD E+ D +V + L +R A I + + + + W+D+RL
Sbjct: 36 LDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERL 95
Query: 303 SWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRL 467
+N G T L + R+W PD+ N + + R+ NGSV + R+
Sbjct: 96 RFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 468 DISTPISMQLDNWPNDMQTCTFQV 539
++ M L +P D Q C+ ++
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.0 bits (99), Expect = 2e-06
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +3
Query: 153 LLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGE 320
L YD P S +I N+T+ L + + S + + + + + W D LSW +
Sbjct: 51 LFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSD 110
Query: 321 W-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPIS 488
+ G + V S+ +W PD+ + N+ T G V ++GSVS + + +
Sbjct: 111 FDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCA 170
Query: 489 MQLDNWPNDMQTC 527
+WP D C
Sbjct: 171 TDFSSWPYDTHRC 183
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 508 PTTCRLARFKFGSRMHNSDEMDFVIDKRIYSM 603
P R FGS +H+ +E++ +DK+ + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.7 bits (96), Expect = 4e-06
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Frame = +3
Query: 144 IDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWN 311
+DS +YD+ P+ + V +T++ L +++ E + + + W D RL++
Sbjct: 16 LDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFK 75
Query: 312 AGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKR 464
G T V SE +W PD +N ATT+ ++ R+ ++GS++ R
Sbjct: 76 K-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIR 131
Query: 465 LDISTPISMQLDNWPNDMQTCTFQV 539
L I+ M L +P D Q C ++
Sbjct: 132 LTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.3 bits (95), Expect = 5e-06
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Frame = +3
Query: 144 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 311
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 312 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 482
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 483 ISMQLDNWPNDMQTCTFQV 539
M L +P D Q CT ++
Sbjct: 161 CMMDLHYYPLDSQNCTVEI 179
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +3
Query: 144 IDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRL 302
+D++L YD E+ D VV + + +R + I + + + W+D+RL
Sbjct: 36 LDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERL 95
Query: 303 SWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRL 467
+N G T L + R+W PD+ N + + R+ NGSV + R+
Sbjct: 96 RFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 468 DISTPISMQLDNWPNDMQTCTFQV 539
++ M L +P D Q C+ ++
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.5 bits (93), Expect = 9e-06
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Frame = +3
Query: 144 IDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWN 311
+DS +YD+ P+ + V +T++ L +++ E + + W D RL++
Sbjct: 16 LDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFK 75
Query: 312 AGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKR 464
G T V SE +W PD +N ATT+ ++ R+ ++GS++ R
Sbjct: 76 K-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIR 131
Query: 465 LDISTPISMQLDNWPNDMQTCTFQV 539
L I+ M L +P D Q C ++
Sbjct: 132 LTITASCPMNLQYFPMDRQLCHIEI 156
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.3 bits (85), Expect = 9e-05
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
+GS++ RL I+ M L +P D Q C ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +3
Query: 144 IDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW 308
+D+LL + YD+ P + VN++ L L A+ ES + LQ W D RL +
Sbjct: 65 LDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRY 124
Query: 309 -NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIST 479
N ++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLIL 184
Query: 480 PISMQLDNWPNDMQTCTFQV 539
+L+ +P D C+F +
Sbjct: 185 SCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +3
Query: 144 IDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW 308
+D+LL + YD+ P + VN++ L L A+ ES + LQ W D RL +
Sbjct: 65 LDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRY 124
Query: 309 -NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIST 479
N ++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLIL 184
Query: 480 PISMQLDNWPNDMQTCTFQV 539
+L+ +P D C+F +
Sbjct: 185 SCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +3
Query: 144 IDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW 308
+D+LL + YD+ P + VN++ L L A+ ES + LQ W D RL +
Sbjct: 65 LDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRY 124
Query: 309 -NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDIST 479
N ++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 125 SNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLIL 184
Query: 480 PISMQLDNWPNDMQTCTFQV 539
+L+ +P D C+F +
Sbjct: 185 SCQGRLNIFPFDDPLCSFAI 204
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.010
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Frame = +3
Query: 243 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 410
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 411 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ +
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.013
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +3
Query: 195 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 368
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
D ++ R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.094
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 11/126 (8%)
Frame = +3
Query: 195 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 356
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 521
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 522 TCTFQV 539
C +
Sbjct: 129 ICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.29
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTFQV 539
C Q+
Sbjct: 176 ECKLQM 181
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 600 TVYSFVNHEIHFVTIVHPRTELETCKS 520
T +FVN + F T V R L C++
Sbjct: 99 TPLTFVNDTVSFTTTVSARFWLMDCRN 125
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 8.2
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 641 WTDPSHPHAP 612
WT P+ PH+P
Sbjct: 444 WTTPTTPHSP 453
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,862
Number of Sequences: 438
Number of extensions: 4818
Number of successful extensions: 81
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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