Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K09
(864 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 42 6e-04
07_01_0373 + 2783596-2784933 33 0.29
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 33 0.39
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 32 0.51
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 30 2.1
01_06_1224 - 35508842-35510404 30 2.1
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 30 2.7
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 30 2.7
12_02_1174 - 26696869-26698191 29 3.6
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 29 3.6
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 29 3.6
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 29 3.6
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 29 3.6
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 29 3.6
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 29 3.6
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 29 3.6
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 29 3.6
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 29 3.6
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 29 3.6
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 3.6
02_04_0452 + 23044190-23045227 29 3.6
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 29 3.6
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.6
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 29 3.6
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 29 3.6
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 29 4.8
08_02_0875 + 22103903-22106293 29 4.8
04_01_0489 + 6436641-6437966 29 6.3
04_01_0041 - 464695-464850,467485-469029 29 6.3
01_05_0227 - 19512866-19514983 29 6.3
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 6.3
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 28 8.4
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 8.4
>06_03_1310 + 29238644-29240260
Length = 538
Score = 41.9 bits (94), Expect = 6e-04
Identities = 30/96 (31%), Positives = 43/96 (44%)
Frame = +2
Query: 473 AGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KE 652
A HPF S ++ P + P R+ L H+ P H PP+ P P P +P
Sbjct: 351 AAHPFDCSKAQCQATPPTTRRPGGRTPL--APHRSPLPHHMPPRRTPPTPPPPSSPTPSH 408
Query: 653 FAPGLKPPLSSEAPSAYLTPSSLGMAKXGFAPLFSS 760
P PP SE+P + + PS+ + G +P SS
Sbjct: 409 LPP--PPPTYSESPKSSMPPSTSPPSSHGASPPSSS 442
>07_01_0373 + 2783596-2784933
Length = 445
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -3
Query: 91 EEEKALTKEGMAEAAETXKGTISSMNRSSS 2
E+++ LTK G + +ET KG++ S++RS S
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRSES 180
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP PP+ + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPPVQTSPPT 638
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 544 AISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKASVVIRGSISVSHP 711
A S+T+TR S PR H PTTP S + + +RA +V+ G+ + HP
Sbjct: 2 AASSTATRLSPPRLHAPTTP---SPHLPLRRSRFSPLRAAKLEAVLTIGTHLIPHP 54
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 532 PPSPAISATSTRSSNPRFHTPTTP-DLTSISINPLNAVLKGVRAGVKASVVIRGSI 696
PPS I A + + H TT D+ +++N LNA+ + V+AG + ++ R I
Sbjct: 185 PPSKDIGAYLSEYVHYIAHGATTDSDVRVLALNTLNALKRSVKAGPRVTIPAREEI 240
>01_06_1224 - 35508842-35510404
Length = 520
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = +2
Query: 518 PYASSH----PPLRS--RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPP 676
PY+ SH PPL+ L+ PD H PP P P + P EF GL PP
Sbjct: 25 PYSPSHADLSPPLQEVYSLYNPDDPPASETHLPPYAPPPAPVVSELPDDLEF--GLHPP 81
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSE 688
S + S PPLRS QP P QPP T P + P +P K+ AP P + +
Sbjct: 578 SPQHPPSPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTS 635
Query: 689 APS 697
P+
Sbjct: 636 PPT 638
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 526 IKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINP 630
I PPSPA + S+R S +PR F TP T T+ S +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSP 62
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 518 PYASSHPPLRSRLH-QPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 694
P PP R+R +P H+ P QPP + P P P P P +KPP+ P
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPP-PPPPPPPPPPPRPPSVKPPVVQPKP 179
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 497 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 551
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 562 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 616
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 562 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 616
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 479 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 601
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 552 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 606
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 282 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 455
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 456 VEGVNVLATPSSSRITIGGLALMHQ 530
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
S PPLRS QP P QPP T P + P +P K+ AP P + + P+
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPAPPSVQTSPPT 638
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 530 SHPPLRSRLHQPDHQIPDSIHQPP-QT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 694
S PPLRS QP P QPP T P + P +P K+ AP P + + P
Sbjct: 584 SPPPLRSPPRQPTPP-PSPSQQPPLPTPQPVQASPTSPT-KQHAPPTPPSVQTSPP 637
>08_02_0875 + 22103903-22106293
Length = 796
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 535 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGV 654
P+P ++A S R NP+ PDL + +N L A GV
Sbjct: 506 PAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGV 545
>04_01_0489 + 6436641-6437966
Length = 441
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -2
Query: 722 PVTRG*DTLMEPLMTTEALTPARTPFSTAFRGLMEMDVKSGVVGVWNRGFDDRVDVAEIA 543
PV+ G D+L E A+ A + +++ + S V+G FDD DVA
Sbjct: 193 PVSCGDDSLPELPPLVAAMEKAMLTQESKQFAYLDVTIPSSVIGRVKAAFDDVGDVARSG 252
Query: 542 GE 537
GE
Sbjct: 253 GE 254
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 243 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 419
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 420 TVD 428
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 460 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 368
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP 673
P S PP + H P Q+P PP P PS+P P +AP +P
Sbjct: 284 PTLQSQPPSQYPGHLPHSQVPPV---PPSA--PVPSVPALPRDPYYAPPAQP 330
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 509 RSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSE 688
R+ P A + PP R+ Q H P P T P P TP + F P P +
Sbjct: 287 RTNPVAPTAPPQHPRITQQPHSAPLLQPFPLPTASPSPPYG-TPLLQPFPPPNPSPSLAS 345
Query: 689 AP 694
AP
Sbjct: 346 AP 347
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 234 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 414 PVTVDLCWTTADVTVEGVNVLATPSS 491
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,800,161
Number of Sequences: 37544
Number of extensions: 506477
Number of successful extensions: 1596
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -