Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K09
(864 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g24550.1 68416.m03083 protein kinase family protein contains ... 35 0.061
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 33 0.19
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 33 0.25
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 32 0.43
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.75
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 31 1.3
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 30 1.7
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 30 2.3
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 7.0
At1g50090.1 68414.m05619 aminotransferase class IV family protei... 28 7.0
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 28 7.0
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 28 9.2
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 9.2
At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /... 28 9.2
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 28 9.2
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 28 9.2
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 35.1 bits (77), Expect = 0.061
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPG-LKPPLSSEAP 694
P ASS PP + P +S PP + P PS+P PG L PPL +P
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP-PSLP-----PPSPPGSLTPPLPQPSP 82
Query: 695 SAYLTPS 715
SA +TPS
Sbjct: 83 SAPITPS 89
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = +2
Query: 482 PFILSHYYWRSRPYASSHPPLRSR---LHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KE 652
PF +S +RP+ +S PP S+ + QP + QPP T P P + P +
Sbjct: 488 PFSMSQPSSTARPFPASQPPAASKSFPISQPPTTSKPFVSQPPNTSKPMP-VSQPPTTSK 546
Query: 653 FAPGLKPP--LSSEAPSAYLTPSSLGMAKXGFAPLFSS 760
P +PP S PS P + + P+F+S
Sbjct: 547 PLPVSQPPPTFQSTCPS---QPPAASSSLSPLPPVFNS 581
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 467 QCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDS-----IHQPPQT*HPFPSIP 631
Q A +PF +S S+P++ S P +R P Q P + I QPP T PF S P
Sbjct: 471 QPASNPFPVSQPRPNSQPFSMSQPSSTARPF-PASQPPAASKSFPISQPPTTSKPFVSQP 529
Query: 632 *TPY*KEFAPGLKPPLSSE 688
P + P +PP +S+
Sbjct: 530 --PNTSKPMPVSQPPTTSK 546
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 521 YASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPG 664
Y SS P +RS H P + P + PP T + S P PY E PG
Sbjct: 441 YVSSFPFIRSPSHSPQYASPAAYPSPPTTVYSNRSPP-YPYSPEIIPG 487
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/80 (28%), Positives = 31/80 (38%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
P S PP+ S P H P +H PP H P +P +P PP+ S P
Sbjct: 673 PVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSP--PPPVHSPPPP 730
Query: 698 AYLTPSSLGMAKXGFAPLFS 757
P + AP++S
Sbjct: 731 VQSPPPPPVFSPPPPAPIYS 750
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
P S PP+ S P H P +H PP H P +P +P P+ S P
Sbjct: 755 PVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPSPIYSPPPP 814
Query: 698 AYLTP 712
+ P
Sbjct: 815 VFSPP 819
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
PY +S P+++R P ++ D+ PPQ P PS P +P ++P PP+ S P
Sbjct: 511 PYDAS--PVKNRRSPPPPKVEDTRVPPPQPPMPSPSPP-SPI---YSP--PPPVHSPPPP 562
Query: 698 AYLTP 712
Y +P
Sbjct: 563 VYSSP 567
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 529 KP-PSPAISATSTRSSNPRFHTPTTPDLTSISIN--PLNAVLKGVRAGVKASVV 681
KP PSP++ + S S NPR P TP T S P++A+ GV A V +S++
Sbjct: 53 KPVPSPSVPSPSVPSPNPR---PVTPPRTPGSSGNCPIDALRLGVCANVLSSLL 103
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H-PFPSIP*TPY*KEFAPGLKPPLSSEAP 694
P S PP+ S P H P +H PP H P P + ++P PP+ S P
Sbjct: 576 PVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPPPPV--------YSPPPPPPVHSPPP 627
Query: 695 SAYLTP 712
+ P
Sbjct: 628 PVFSPP 633
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
P S PP+ S P H P +H PP H P +P ++P PP+ S P
Sbjct: 541 PVHSPPPPVHSP-PPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPP-PPPVHSPPPP 598
Query: 698 AYLTP 712
+ P
Sbjct: 599 VHSPP 603
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQI--PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEA 691
P+ S PP + P Q P+ HQP H P PY ++ PG +P S A
Sbjct: 388 PHQSYPPPPYGYMPSPYQQQYPPNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTA 447
Query: 692 PSAYLTPSS 718
SA ++P S
Sbjct: 448 VSA-ISPDS 455
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Frame = +2
Query: 494 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDS-IHQPPQT*HPFPS-----IP*TPY*KEF 655
SH + ++ +H P S H P H S H P P PS P TP
Sbjct: 238 SHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATP--SPM 295
Query: 656 APGLKPPLSSEAPSAYLTPS 715
P P+SS +P PS
Sbjct: 296 TPQSPSPVSSPSPDQSAAPS 315
>At1g50090.1 68414.m05619 aminotransferase class IV family protein
contains Pfam profile: PF01063 aminotransferase class IV
Length = 367
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 309 VQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPS 488
V+S N S ++K +A V+F A + K V C ++ + N+++TP
Sbjct: 201 VKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTC----NIFILKGNIVSTPP 256
Query: 489 SSRITIGGLALMHQATLPCDLGY 557
+S + G+ L D+GY
Sbjct: 257 TSGTILPGITRKSICELARDIGY 279
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPS 697
PY S PP +++ P PP + + S P PY ++P P + P
Sbjct: 304 PYVYSSPPPPPYVYKSPPPPPYVYTSPPPPPYVYKSPPPPPYVDSYSPPPAPYVYKPPPY 363
Query: 698 AYLTP 712
Y P
Sbjct: 364 VYKPP 368
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 518 PYASSHPP-LRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 694
PY+S P S +H+ + + P + P P + ++ P KP L + P
Sbjct: 24 PYSSHQTPQYNSPVHKHESSYSPKKYSPYYSASPLPPLQYRRQGPKYTPHPKPYLFNSPP 83
Query: 695 SAYLTPS 715
Y +PS
Sbjct: 84 PPYYSPS 90
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPDSIHQPPQT*H--PFPSIP*TPY*KEFAPGLKPPLSSEA 691
P S PP+ S P + P +H PP H P P+ +P +P PP+ S
Sbjct: 564 PVHSPPPPVFSP-PPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPP 622
Query: 692 PSAYLTPSS 718
P + P S
Sbjct: 623 PPVFSPPPS 631
>At4g32380.1 68417.m04611 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 354
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 539 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPL 679
P+ H D Q P S++ P P+ P TP+ + AP +PPL
Sbjct: 292 PITCSFHTEDSQ-PASLNPQPSA--PYAISPTTPHTQPHAPTTQPPL 335
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 312 QSLPNVSSIIKGYRDAY 362
QSLPN+SS IK ++DA+
Sbjct: 854 QSLPNISSSIKYFKDAF 870
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLTPS 715
PP S+ H+ I S P +T H PS P TP P PP + PS +TPS
Sbjct: 123 PPPPSKTHERSRPITPSPPPPSKT-HE-PSRPNTP------PPPPPPSKTHEPSRRITPS 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,709,203
Number of Sequences: 28952
Number of extensions: 381679
Number of successful extensions: 1291
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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