Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K06
(1208 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /... 38 0.013
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 35 0.093
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 34 0.21
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.28
At1g75550.1 68414.m08780 glycine-rich protein 33 0.38
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 33 0.50
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 33 0.50
At1g04660.1 68414.m00463 glycine-rich protein 33 0.50
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 32 0.66
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 32 0.87
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 32 0.87
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 32 0.87
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 31 1.1
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 31 1.1
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.1
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 31 1.1
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 31 1.5
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 31 1.5
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 31 2.0
At4g13850.1 68417.m02145 glycine-rich RNA-binding protein (GRP2)... 31 2.0
At2g28490.1 68415.m03462 cupin family protein similar to preproM... 31 2.0
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 31 2.0
At5g48360.1 68418.m05975 formin homology 2 domain-containing pro... 30 2.6
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 30 2.6
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 30 2.6
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 30 3.5
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 30 3.5
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 4.6
At5g62210.1 68418.m07811 embryo-specific protein-related contain... 29 4.6
At5g10550.1 68418.m01221 DNA-binding bromodomain-containing prot... 29 4.6
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 4.6
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 4.6
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.6
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 4.6
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 29 6.1
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 29 6.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 6.1
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 29 6.1
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 29 6.1
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 8.1
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 8.1
At4g33660.1 68417.m04781 expressed protein 29 8.1
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 29 8.1
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 8.1
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 29 8.1
>At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /
glycine-rich protein (GRP2) identical to Glycine-rich
protein 2b (AtGRP2b) [Arabidopsis thaliana]
SWISS-PROT:Q38896; contains Pfam domains PF00313:
'Cold-shock' DNA-binding domain and PF00098: Zinc
knuckle
Length = 201
Score = 37.9 bits (84), Expect = 0.013
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 24 GXXXGXGGXGXGGXXXGGXXXXGXGGXXXXRGDGXRXXXGGD 149
G G GG G GG GG GG RG G R GGD
Sbjct: 94 GSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGD 135
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 35.1 bits (77), Expect = 0.093
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PSPPP P P PP PP PP P
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPPPP 406
Score = 34.3 bits (75), Expect = 0.16
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP P P PP PP PP P
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYP 411
Score = 33.1 bits (72), Expect = 0.38
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PPP P P PP PP PP
Sbjct: 377 PSPPPPPPPPPPPPPPPPPPPPPPPPPPP 405
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PPP P P PP PP PP
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPP 404
Score = 31.9 bits (69), Expect = 0.87
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
PP P PP PP P PP P P
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPP 401
Score = 31.9 bits (69), Expect = 0.87
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP P P PP + P PP P
Sbjct: 386 PPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPP 418
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP P P P PP PP P
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPP 422
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXL---PPXPPXXXP 22
P P PPP P P PP PP PP P
Sbjct: 400 PPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYP 435
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 33.9 bits (74), Expect = 0.21
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 123 HPLX-PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
HPL P PPP S P P PP PP P P
Sbjct: 18 HPLPSPVPPPPSHISPPPPPFSPPHHPPPPHFSPP 52
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 144 HXXXXAXHPLXPSPPPXSXXXXXPXPXXPPX-LPPXPPXXXP 22
H + +P P PPP S P PP LPP PP P
Sbjct: 53 HQPPPSPYP-HPHPPPPSPYPHPHQPPPPPHVLPPPPPTPAP 93
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.5 bits (73), Expect = 0.28
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSPPP P P PP P PP P
Sbjct: 426 PPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPP 458
Score = 32.7 bits (71), Expect = 0.50
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSPPP P P PP PP PP P
Sbjct: 482 PPPPSPPPPPPPVYSPPPPPPP--PPPPPVYSP 512
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
PP P PP PP P PP P P
Sbjct: 453 PPPPPPPPPPVYSPPPPPPPPPPPPP 478
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP P P PP PP PP P
Sbjct: 451 PPPPPPPPPPPPVYSPPPPPPPP-PPPPPVYSP 482
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP P P PP PP PP P
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPP--PPPPPVYSP 497
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXL--PPXPPXXXP 22
P P PPP P P PP + PP PP P
Sbjct: 440 PPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPP 474
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PP S P P PP P PP P
Sbjct: 472 PPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPP 504
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PP P PP PP P PP P
Sbjct: 484 PPSPPPPPPPVYSPPPPPPPPP 505
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PP P PP PP P PP P
Sbjct: 438 PPPPPPPPPPVYSPPPPPPPPP 459
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PP P PP PP P PP P
Sbjct: 469 PPPPPPPPPPVYSPPPPSPPPP 490
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PPP P P PP PP PP P
Sbjct: 439 PPPPPPPPPVYSPPP--PPPPPPPPPVYSP 466
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PP S P P PP P PP
Sbjct: 487 PPPPPPPVYSPPPPPPPPPPPPVYSPPPP 515
>At1g75550.1 68414.m08780 glycine-rich protein
Length = 167
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 23 GXXXGGXGGRXGGXXGWGXXXXXEXGGGXGXRGW 124
G GG GG GG G G GGG G GW
Sbjct: 71 GGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGGGW 104
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
PL P PP P P PP PP PP
Sbjct: 36 PLFPQSPPPPPPPPPPPPPPPPPPPPPPP 64
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
PPL PP PP P PP P P
Sbjct: 35 PPLFPQSPPPPPPPPPPPPPPPPPPP 60
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
P P PP PP P PP P P
Sbjct: 39 PQSPPPPPPPPPPPPPPPPPPPPPPP 64
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSPPP P PP LPP P P
Sbjct: 71 PPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPP 103
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
PP P PP PP P PP P P
Sbjct: 64 PPPPPPCPPPPSPPPCPPPPSPPPSP 89
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPP---XPPXXXP 22
P P PPP S P P PP PP PP P
Sbjct: 66 PPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLP 101
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSP P P P PP PP PP P
Sbjct: 47 PPSPSPEPEPEPADCPPPPPPPPCPP-PPSPPP 78
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -3
Query: 120 PLXPSPPP-XSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSPPP P P PP PP P P
Sbjct: 80 PPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPP 113
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPX---LPPXPPXXXP 22
P PPP S P P PP PP PP P
Sbjct: 78 PCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQP 110
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 97 PLPXXXXPPXXXPPXPXPPXPXXXP 23
P P PP PP P PP P P
Sbjct: 56 PEPADCPPPPPPPPCPPPPSPPPCP 80
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PPP P PP PP PP
Sbjct: 62 PPPPPPPPCPPPPSPPPCPPPPSPPPSPP 90
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 32.7 bits (71), Expect = 0.50
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 25 GGXGGXGGXGGGGXGXGXXXXXGXGGXXXXEGMG 126
GG GG GG GGG G G G G G+G
Sbjct: 124 GGVGGLGGVGGGVGGLGGVGGLGGAGLGGVGGVG 157
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 25 GGXGGXGGXGGGGXGXGXXXXXGXGGXXXXEGMG 126
GG GG GG GG G G G G G+G
Sbjct: 137 GGLGGVGGLGGAGLGGVGGVGGGIGKAGGIGGLG 170
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 32.3 bits (70), Expect = 0.66
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXP 37
P PSPPP P P PP PP P
Sbjct: 64 PPPPSPPPPKKSSCPPSPLPPPPPPPPP 91
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 9/42 (21%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPP---------XLPPXPPXXXP 22
P PSPPP S P P PP LPP PP P
Sbjct: 50 PPPPSPPPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPP 91
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 31.9 bits (69), Expect = 0.87
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P+ PSPPP S P PP PP PP
Sbjct: 135 PITPSPPPPSKTHEPSRPNTPP--PPPPP 161
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 31.9 bits (69), Expect = 0.87
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PPP S P P PP P PP P
Sbjct: 65 PPPPPTSPPPPSPPPPSPPPPSPPPPSPPP 94
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXPXXXP 23
PP P PP PP P PP P P
Sbjct: 64 PPPPPPTSPPPPSPPPPSPPPPSPPP 89
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P SPPP S P P PP P PP
Sbjct: 67 PPPTSPPPPSPPPPSPPPPSPPPPSPPPP 95
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 31.9 bits (69), Expect = 0.87
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PSP P P P PP PP PP P
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQP 77
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PSPPP P P PP P P P
Sbjct: 52 PSPPPKPQPKPVPPPACPPTPPKPQPKPAP 81
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPP 34
P PPP P P PP PP PP
Sbjct: 52 PYPPPPPLPDFAPQPLLPPPSPPPPP 77
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PPLP P PP P PP P
Sbjct: 57 PPLPDFAPQPLLPPPSPPPPPP 78
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 123 HPLXPSPPPX-SXXXXXPXPXXPPXLPPXPPXXXP 22
+P P PP S P P PP +PP PP P
Sbjct: 8 YPPLPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQP 42
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPP 34
P PPP P P PP PP PP
Sbjct: 601 PPPPPPPSSRSIPSPSAPPPPPPPPP 626
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPP 43
P P PPP + P P PP LPP
Sbjct: 681 PPPPPPPPKANISNAPKPPAPPPLPP 706
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PP S P PP PP PP P
Sbjct: 575 PPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPP 607
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -3
Query: 123 HPLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
+P PSPPP S P PP LPP PP
Sbjct: 58 NPPPPSPPPPSPPPPACPP--PPALPPPPP 85
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 123 HPLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
H PSPPP P P PP L P PP
Sbjct: 1130 HESPPSPPP-QPPSSPPPPSSPPQLAPAPP 1158
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXL-----PPXPPXXXP 22
PL P PPP P P PP + PP PP P
Sbjct: 28 PLPPPPPPPLMRRRAPPPPPPPLMRRRAPPPPPPPPLP 65
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PPP P PP PP PP
Sbjct: 690 PPPPPPPPMQHSTVTKVPPPPPPAPPAPP 718
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P+PP P P PP PP PP
Sbjct: 712 PAPPAPPTPIVHTSSPPPPPPPPPPPAPP 740
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 108 SPPPXSXXXXXPXPXXPPXLPPXPP 34
SPPP S P PP PP PP
Sbjct: 673 SPPPISNSDKKPALPRPPPPPPPPP 697
>At4g13850.1 68417.m02145 glycine-rich RNA-binding protein (GRP2)
glycine-rich RNA binding protein 2 AtGRP2 [Arabidopsis
thaliana] GI:2826811
Length = 158
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 23 GXXXGGXGGRXGGXXGWGXXXXXEXGGGXGXRGW 124
G GG GG GG G+G GGG G G+
Sbjct: 125 GGYSGGGGGYGGGGGGYGGGGGGYGGGGDGGGGF 158
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 35 GGXGGRXGGXXGWGXXXXXEXGGGXGXRG 121
GG GG GG G+G GGG G G
Sbjct: 122 GGGGGYSGGGGGYGGGGGGYGGGGGGYGG 150
>At2g28490.1 68415.m03462 cupin family protein similar to
preproMP27-MP32 [Cucurbita cv. Kurokawa Amakuri]
GI:691752, allergen Gly m Bd 28K [Glycine max]
GI:12697782, vicilin [Matteuccia struthiopteris]
GI:1019792; contains Pfam profile PF00190: Cupin
Length = 511
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 35 GGXGGRXGGXX-GWGXXXXXEXGGGXGXRGW 124
GG GG GG G G GGG G RGW
Sbjct: 55 GGGGGAWGGEGEGGGEWGGGGEGGGGGRRGW 85
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 120 PLXPSPP-PXSXXXXXPXPXXPPXLPPXPP 34
PL P PP P P P PP PP PP
Sbjct: 78 PLFPPPPLPRLPPPLLPPPEEPPREPPPPP 107
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PL P PP S P P PP LPP P P
Sbjct: 35 PLLPLSPPPSPP---PSPSSPPRLPPPFPALFP 64
>At5g48360.1 68418.m05975 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 782
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
PL P PP P P PP LPP PP
Sbjct: 44 PLSPISPPFFPLESSP-PSPPPPLPPTPP 71
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 120 PLXPS--PPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PL PS PPP P P PP PP PP P
Sbjct: 1085 PLPPSSLPPPPPAALFPPLPP-PPSQPPPPPLSPP 1118
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
PL PSPPP S P P LPP PP
Sbjct: 1074 PLPPSPPPPS------PPLPPSSLPPPPP 1096
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 23 GXXXGGXGGRXGGXXGWGXXXXXEXGGGXGXRG 121
G GG GG GG G+G GGG G G
Sbjct: 148 GGGYGGGGGGYGGGGGYGGGGGGYGGGGRGGGG 180
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PP P PP PP P PP P
Sbjct: 37 PPPPPVYSPPISPPPPPPPPPP 58
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PP S P P PP P PP
Sbjct: 98 PQPPQSPPASAPTVSPPPVSPPPAPTSPP 126
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P+ PP + P P PP P PP
Sbjct: 119 PPAPTSPPPTPASPPPAPASPPPAPASPP 147
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P SPPP P P PP PP PP P
Sbjct: 368 PPRRSPPPLQTPPPPPPP--PPLAPPPPPQKRP 398
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 97 PLPXXXXPPXXXPPXPXPPXPXXXP 23
P P PP PP P PP P P
Sbjct: 367 PPPRRSPPPLQTPPPPPPPPPLAPP 391
>At5g62210.1 68418.m07811 embryo-specific protein-related contains
weak similarity to embryo-specific protein 3
(GI:3335171) [Arabidopsis thaliana]
Length = 223
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PS PP S P P P +PP PP P
Sbjct: 166 PFSPSIPPPSPPYFPPEP---PSIPPPPPPSPP 195
>At5g10550.1 68418.m01221 DNA-binding bromodomain-containing protein
low similarity to kinase [Gallus gallus] GI:1370092;
contains Pfam profile PF00439: Bromodomain
Length = 678
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 120 PLXPS--PPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PL P+ PPP P P P PP PP P
Sbjct: 404 PLLPTLPPPPVIEITRDPSPPPSPVQPPPPPSPPP 438
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P P PPP S P P P PP PP P
Sbjct: 89 PPKPLPPPLSPPQTTP-PPPPAITPPPPPAITP 120
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PL SPPP P PP PP P P
Sbjct: 72 PLDSSPPPPPDLTPPPSSPPPPDAPPPIPIVFP 104
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P SPPP S P PP P PP P
Sbjct: 577 PPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSP 609
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 108 SPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
SPPP P P P PP PP P
Sbjct: 574 SPPPPVASPPPPSPPPPVHSPPPPPVFSP 602
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P+ PSPPP S P PP PP P P
Sbjct: 622 PVTPSPPPPSPVYYPPVTPSPP--PPSPVYYPP 652
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXP 37
P+ PSPPP S P PP PP P
Sbjct: 637 PVTPSPPPPSPVYYPPVTPSPP--PPSP 662
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXP 37
PL P PPP P P PP PP P
Sbjct: 53 PLPPPPPPAMRRRVLPRPPPPP--PPLP 78
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPP 34
P PPP + P P PP P PP
Sbjct: 265 PPPPPAAAPPPQPPPPPPPKPQPPPP 290
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 100 PPLPXXXXPPXXXPPXPXPPXP 35
PPLP PP PP PP P
Sbjct: 672 PPLPGGGPPPPPPPPGGGPPPP 693
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/81 (23%), Positives = 26/81 (32%)
Frame = +1
Query: 907 VYPGFSXPIQPFXXPXLTLXVARAKKNWPXKXXPNQXQLWXPPSNXXFGKVXGPPFXGKX 1086
++P + P P L +A P P + PPS+ PP+ G
Sbjct: 19 MFPFITISQTPCPYPCNPLPIAGTGSTQPAGYYPQPTGYYPPPSSSNVPNYPSPPYYG-- 76
Query: 1087 GXSXXXGGXXXXPPPPXKTXP 1149
G PPPP P
Sbjct: 77 ---GNPSGGYNGPPPPDPILP 94
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
PL P PP + P P LPP PP
Sbjct: 50 PLVPPGPPYAPPAQIPSSLLPTNLPPPPP 78
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P+PPP S P P P P PP
Sbjct: 388 PPPPAPPPGSGGPKPPPPPGPKGPRPPPP 416
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P+PPP S P P P P PP
Sbjct: 388 PPPPAPPPGSGGPKPPPPPGPKGPRPPPP 416
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 97 PLPXXXXPPXXXPPXPXPPXPXXXP 23
P P PP PP P PP P P
Sbjct: 20 PPPPVGVPPQYYPPPPPPPPPPPPP 44
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 120 PLXPSPPPXSXXXXXPXPXXPPXLPPXPP 34
P P PPP P P PP PP P
Sbjct: 9 PPPPPPPPPRLLVLPPLPPPPPPPPPQLP 37
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -3
Query: 120 PLXPSP-PPXSXXXXXPXPXXPPXLPPXPPXXXP 22
P PSP PP S P P P PP P P
Sbjct: 142 PSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMP 175
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 111 PSPPPXSXXXXXPXPXXPPXLPPXPPXXXP 22
PSP P P P PP PP PP P
Sbjct: 52 PSPEPEDYLPLPPPPQTPP--PPPPPQSLP 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,372,892
Number of Sequences: 28952
Number of extensions: 187606
Number of successful extensions: 2997
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3083946536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -