Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_K04
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0014 - 2977053-2977296,2977719-2978098                           29   3.5  
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764           29   4.6  

>09_02_0014 - 2977053-2977296,2977719-2978098
          Length = 207

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +3

Query: 60  ENQRGKKTLIELDSSSGIVRRHERCSISGRSFRAIVAEKPLLXLFHYLLGWAESVRGR 233
           E++RG  T  E+++ + + R     +I  R    ++ ++PL+ +F  L G A +   R
Sbjct: 59  EDRRGTVTTDEIETPNLLTRVEIEDTIIAREAELLIPKRPLILVFVVLFGSASTTTSR 116


>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
          Length = 640

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 310 LNGDERXRHVTTLHAWNETPCARRYY 233
           L+G       TT  AW ETPCA R++
Sbjct: 550 LDGGGGGGEKTTTEAWVETPCAHRFH 575


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,836,915
Number of Sequences: 37544
Number of extensions: 255277
Number of successful extensions: 545
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)