Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K03
(851 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 33 0.004
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 31 0.012
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 27 0.25
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 26 0.33
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 25 0.57
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 1.8
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.4
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.4
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.4
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.004
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V +NGS ++ + M + +P D Q C KFGS ++ +++D V++
Sbjct: 110 VKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
++ +LW+PDV++ ++
Sbjct: 80 ITPNKLWKPDVLMYNS 95
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 31.1 bits (67), Expect = 0.012
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V +NGS ++ + + + +P D Q C KFGS ++ +++D V++
Sbjct: 110 VKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
++ +LW+PDV++ ++
Sbjct: 80 ITPNKLWKPDVLMYNS 95
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V + GS ++ + M + +P D Q C KFGS ++ +++D V++
Sbjct: 110 VKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
++ +LW+PDV++ ++
Sbjct: 80 ITPNKLWKPDVLMYNS 95
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V + GS ++ + M + +P D Q C KFGS ++ +++D V++
Sbjct: 110 VKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
++ +LW+PDV++ ++
Sbjct: 80 ITPNKLWKPDVLMYNS 95
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V + GS ++ + M + +P D Q C KFGS ++ +++D V++
Sbjct: 110 VKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/16 (31%), Positives = 13/16 (81%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
++ +LW+PDV++ ++
Sbjct: 80 ITPNKLWKPDVLMYNS 95
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.6 bits (56), Expect = 0.25
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 358 TALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 462
+A+ + N + SW + ++ + + M LDNW ND
Sbjct: 271 SAIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
RV ++GS++ RL I+ M L P D Q C + S
Sbjct: 148 RVHHSGSITRSIRLTITASCPMNLQYLPMDRQLCHIEIES 187
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 25.4 bits (53), Expect = 0.57
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = -1
Query: 233 VDSDSRMLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQVRRNG 54
V S+S CR I + ++ V+ + +DS AF+ +AQV
Sbjct: 56 VSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTEMLLKKDSSEAFNEFRTKILAQVHGTN 115
Query: 53 NKNNISRRHFMTT 15
N N + R TT
Sbjct: 116 NGTNKNMRRLSTT 128
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -1
Query: 215 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 69
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 553 ESGAWDVTALSSAVXSQDRGE 615
E W+ +A S +QDRGE
Sbjct: 151 EQYVWESSAGGSFTVTQDRGE 171
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 294 RXSGAAALGWCPRN 335
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 636 HCHASFHLATVLA-XHRTGQSRHIP 565
HCH FH+ +A + G+ +P
Sbjct: 603 HCHIEFHVEVGMALVFKIGEDYEMP 627
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,539
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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