Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K03
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 42 6e-04
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 42 8e-04
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 42 8e-04
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 41 0.001
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 39 0.004
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 39 0.004
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.004
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 38 0.008
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.032
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 36 0.042
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.042
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.055
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 34 0.17
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 33 0.22
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 33 0.22
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 33 0.29
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 33 0.29
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 32 0.51
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 32 0.68
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 31 0.90
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 31 1.2
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29) 31 1.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.6
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 31 1.6
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 30 2.7
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 30 2.7
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.7
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 6.3
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 29 6.3
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 29 6.3
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 516
V N G W + + SM L WP D QTC KFGS + S+ M
Sbjct: 181 VENTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIYS- 546
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 80
Query: 547 -MFESGAWDVTALS 585
+SG WD+ +S
Sbjct: 81 RFMQSGDWDIKEVS 94
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIYS- 546
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 161
Query: 547 -MFESGAWDVTALS 585
+SG WD+ +S
Sbjct: 162 RFMQSGDWDIKEVS 175
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +1
Query: 358 TALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 537
T R R++++G W + T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 49 TNTRVRITSSGMTYWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 108
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 355 GTALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID- 531
G + +VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 12 GFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSP 71
Query: 532 -KRIYSMFESGAWD 570
I ++G WD
Sbjct: 72 TASIKGYQQNGEWD 85
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 17/151 (11%)
Frame = +1
Query: 187 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAGVL------GTL 339
LTL+ H ++E ++ L+ W D RL+WN G + L L L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 340 VEA*RGTALRAR-----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHN 504
A + LR + +++ G V W+ L + T M + ++P D Q C +FGS +
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGSWSTS 140
Query: 505 SDEMD---FVIDKRIYSMFESGAWDVTALSS 588
MD F + E+G W + + +S
Sbjct: 141 LRYMDVHPFEDTANLQYFVENGEWILESTTS 171
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 355 GTALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID- 531
G + +VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 165 GFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSP 224
Query: 532 -KRIYSMFESGAWD 570
I ++G WD
Sbjct: 225 TASIKGYQQNGEWD 238
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK 534
+S++GS +W+ I T + + +P D+Q C KFGS H+ ++D + K
Sbjct: 85 LSSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI--DKRI 540
RA + +NG W +I + ++ + +P D Q C KFGS ++ +++ D
Sbjct: 118 RATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQLNLTSKGDSAD 177
Query: 541 YSMF-ESGAWDVTAL 582
S + +SG WD+ +
Sbjct: 178 LSKYTKSGEWDLLGM 192
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI-DKRIYSM 549
RV NG+V++ R+ + M+ N+P D Q+C S DE+ ++ D RIY
Sbjct: 165 RVYPNGNVTFSTRISATLSCKMEFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIYK- 223
Query: 550 FESGAWDVTALSSAV 594
E +DV L V
Sbjct: 224 GELAQFDVLGLKKDV 238
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR--IYSM 549
V +G V WI + ++ ++++ WP D Q CT F S + E+ +D
Sbjct: 458 VRQSGKVDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMDNSGLTTGH 517
Query: 550 FESGAWDV 573
+ WD+
Sbjct: 518 LSNNEWDI 525
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 355 GTALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK 534
G + +V+ +G+ +W+ +T + + +P D Q C KFGS ++++ +D ++
Sbjct: 94 GFTAKIKVNYSGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVDIFPEE 153
Query: 535 ---RIYSMFESGAWD 570
I ++G WD
Sbjct: 154 DQASIKGYQKNGEWD 168
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 36.3 bits (80), Expect = 0.032
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 385 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK---RIYSMFE 555
NG W+ + +++ + + +P D Q C+ KFGS ++ + +D V + +
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVP 81
Query: 556 SGAWDVTALSS 588
SG WD+ + ++
Sbjct: 82 SGQWDLVSFTA 92
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV-----ID 531
+A V +NG W +I + + + +P D Q C KFGS + +++F D
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNFTNKRNSAD 80
Query: 532 KRIYSMFESGAWDVTA 579
+Y++ SG W + A
Sbjct: 81 LTMYTI--SGEWALVA 94
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK---RIYS 546
+S +GS +W + + + +P D QTC KFGS + ++D +
Sbjct: 102 ISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVDIQASPAPVKSSK 161
Query: 547 MFESGAWDVTALSSAVXSQ 603
+S WD+ + +++ SQ
Sbjct: 162 YLKSAEWDLMSATTSRKSQ 180
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 35.5 bits (78), Expect = 0.055
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDE 513
+ + ++G+V W+ + + + + + N+P D Q C +FGS ++ E
Sbjct: 269 KVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF-VIDKRIYSMF 552
V +NG V W+ + + + M + ++P D Q C KF S + E+ +D + +
Sbjct: 97 VESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDNDVRQNY 156
Query: 553 -ESGAWDV 573
ES WD+
Sbjct: 157 SESSEWDL 164
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
V+++GS +W+ I + + + +P D+Q+C FGS H+ ++D
Sbjct: 143 VNHDGSTTWLAPAIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV----IDK 534
+ ++ +GS W+ + + + +P D Q+C KFGS ++ ++ V D
Sbjct: 129 KVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGSWTYDGLRLNIVPENGTDI 188
Query: 535 RIYSMFESGAWDVTALSS 588
I +G W++T +S+
Sbjct: 189 GIDKFVSNGEWELTGVSA 206
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = -3
Query: 387 VIRYTGAESSTTSGLHKRSEDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVS 208
++R +SS SGLH+ S + Q ++ + HG LG S
Sbjct: 42 IVRDDHDDSSVISGLHQSPMPASMAGDTLQHTLLEQD-LEETRMTATTPDHGHLG----S 96
Query: 207 MSQMQGQVDYDFGVGGGV 154
+S + G+++ D+GVGGGV
Sbjct: 97 VSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = -3
Query: 387 VIRYTGAESSTTSGLHKRSEDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHGGLGLTNVS 208
++R +SS SGLH+ S + Q ++ + HG LG S
Sbjct: 309 IVRDDHDDSSVISGLHQSPMPASMAGDTLQHTLLEQD-LEETRMTATTPDHGHLG----S 363
Query: 207 MSQMQGQVDYDFGVGGGV 154
+S + G+++ D+GVGGGV
Sbjct: 364 VSMIMGKMNNDYGVGGGV 381
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
+ +NG SW+ + + +P D Q CT +FGS ++ ++D ID
Sbjct: 86 IRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF---VIDKR 537
R VS++G W+ + S+ ++++ +P D Q C+ KFGS + +D
Sbjct: 90 RIIVSSDGKNMWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLDLKPEAPQAS 149
Query: 538 IYSMFESGAWDV 573
+ +G WD+
Sbjct: 150 LSKFIPNGEWDL 161
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID--KRIYSM 549
V G V W+ ++ +++ WP D Q CT F S ++ E+ D +
Sbjct: 57 VWQGGKVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQEIIIETDDSELTRDH 116
Query: 550 FESGAWDVTALSS 588
+ WD+ +++
Sbjct: 117 LHNSQWDIINITA 129
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF-----VIDKRI 540
+ + G + W + T + + +P D QTC FGS +N ++D + I
Sbjct: 144 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKIDVTFFRGIAGADI 203
Query: 541 YSMFESGAWDVTA 579
+ ++G W++ +
Sbjct: 204 STYSQNGEWELVS 216
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+ + G + W + T + + +P D QTC FGS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
+ ++ N+G W I + ++ + +P D Q C KFGS +N E++ V
Sbjct: 17 KVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGLEVNIV 69
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 382 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+NG+ W + + +++ +P D QTC KFGS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 418 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 537
+ T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 44
>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
Length = 355
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 424 TPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM----FESGAWDV 573
T + + ++P D Q C FG+ ++ +E++ + +KR+ ++ E+G W V
Sbjct: 7 TMCKIDVTDFPFDSQRCPITFGAWQYDQNEVNLINNKRLATVASTRVENGEWTV 60
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 483
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 522
R + +G + + + + I M L ++P D Q C KFGS ++ F
Sbjct: 321 RLSIDPDGKIFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGSYAFTDTDIFF 372
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSMFE 555
+ ++G+ SW +I + + + +P D Q+C FGS + + ++ V + + +
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLVNARNQSDLSK 69
Query: 556 ---SGAWDV 573
SG W++
Sbjct: 70 YTISGEWEL 78
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 385 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 516
+GS+ + + I M L ++P D QTC FGS + +++
Sbjct: 48 DGSIFYSRSAHIVASCEMDLRDFPMDTQTCNLVFGSYGYTDNDI 91
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 382 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR---IYSMF 552
N G++ W + + + + +P D Q C+ FGS + S+ + I ++ +
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQKEPDLSKYT 71
Query: 553 ESGAWDV 573
+G W++
Sbjct: 72 PNGQWEM 78
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 385 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 516
+GS+ + + I M L ++P D QTC FGS + +++
Sbjct: 175 DGSIFYSRSAHIVASCEMDLRDFPMDTQTCNLVFGSYGYTDNDI 218
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 379 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH--NSDEMDFVIDKRIYSMF 552
S++G+ W ++ ++ + +P D Q C+ KFGS + N M D S +
Sbjct: 183 SSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGSWTYVGNRLTMTSTSDSADLSKY 242
Query: 553 -ESGAWDVTAL 582
+G W + A+
Sbjct: 243 VNNGEWHLLAM 253
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 18/120 (15%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGXVG------------------LQHLAGVLGTL 339
+ E L+M W D L WN G + + AG LG
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 340 VEA*RGTALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+ + R V ++G+V W+ I + + + +P D Q C FGS ++ ++D
Sbjct: 594 ITS--SNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 451 WPNDMQTCTFKFGSRMHNSDEMDFVI-----DKRIYSMFESGAWDVTAL 582
+P D Q C KFGS H+S +D +K IY+ E G W + +
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLDMRTQTNGSNKDIYT--EHGEWQLVGV 1555
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 96 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 275
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 276 TTELE 290
+ + E
Sbjct: 484 SRDSE 488
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 522
+ NG + + R + M L N+P D+Q C+ S + ++DF
Sbjct: 175 IKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCSLVLESFAYTGRQIDF 223
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
+ G V + +R+ + M L N+P D Q+C+ F S
Sbjct: 52 IDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCSISFES 90
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 385 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNS 507
NG V + + I+ M+L ++P D Q C K GS +++
Sbjct: 66 NGDVVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 222 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 118
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,621,436
Number of Sequences: 59808
Number of extensions: 508883
Number of successful extensions: 1375
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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