Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K03
(851 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 37 7e-04
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 34 0.005
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 33 0.008
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 33 0.011
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 33 0.011
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 33 0.015
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 32 0.019
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 32 0.019
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 31 0.034
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 29 0.14
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 43.2 bits (97), Expect = 1e-05
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAG--------VLGTLVEA*RG 357
N+ E ++ L++ W D +L W+ G +G+ L VL +
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 124
Query: 358 TALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI- 528
++ V NG V W+ + ++ + +P D QTC KFGS N D++ +
Sbjct: 125 VRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALY 184
Query: 529 -DKRIYSM---FESGAWDVTALSSAVXSQDRGEVEARVAMFXMSFRR 657
+K + ++SG WD+ + + + + E + + + R+
Sbjct: 185 NNKNFVDLSDYWKSGTWDIIEVPAYLNVYEGNPTETDITFYIIIRRK 231
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 39.9 bits (89), Expect = 1e-04
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Frame = +1
Query: 133 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXV 303
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 304 GLQHLAGVLGTLV--------------EA*RGTALRARVSNNGSVSWIKRLDISTPISMQ 441
G ++ T+V + V + G V W+ + +
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELN 165
Query: 442 LDNWPNDMQTCTFKFGSRMHNSDEMDFVI--DKRIYSMFESGAWDVTALS 585
+ WP D Q C K GS + ++ I + +I ++ + W + +S
Sbjct: 166 MRLWPFDYQKCIVKIGSWTFDGYMLNLTIGSEPQIETLVSNSEWKIAKIS 215
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 37.1 bits (82), Expect = 7e-04
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+A V NNG V W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 131 KATVYNNGMVIWQPPAVYKSSCSIDVEYFPYDVQTCVLKLGSWTYDGFKVD 181
Score = 24.6 bits (51), Expect = 3.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 104 VPSDHIWRPDIVL 116
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.005
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 285
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 286 WNAGXVG----LQHLAGVL--------GTLVEA*RGTA-LRARVSNNGSVSWIKRLDIST 426
WN G L+ L + E GT V NNGS ++ +
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKS 146
Query: 427 PISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
+ + +P D Q C KFGS ++ +++D +++
Sbjct: 147 TCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLILN 181
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.008
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+A + G V W + M ++ +P D QTC KFGS +N +++
Sbjct: 133 KATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQTCLMKFGSWTYNGAQVE 183
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL 361
G V SE++W PD+VL
Sbjct: 100 GVEMLYVPSEQIWLPDIVL 118
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 33.1 bits (72), Expect = 0.011
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 361 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
A +A + + G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 129 ATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 181
Score = 24.6 bits (51), Expect = 3.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 104 VPSDHIWRPDIVL 116
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 33.1 bits (72), Expect = 0.011
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 361 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
A +A ++ G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 125 ATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 177
Score = 24.6 bits (51), Expect = 3.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 100 VPSDHIWRPDIVL 112
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 32.7 bits (71), Expect = 0.015
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
V NNGS ++ + + + +P D Q C KFGS ++ +++D +++
Sbjct: 130 VKNNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLILN 181
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 32.3 bits (70), Expect = 0.019
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IY 543
V NNGS ++ + + + +P D Q C KFGS ++ ++D + +
Sbjct: 145 VRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDVS 204
Query: 544 SMFESGAWDV 573
S +G WD+
Sbjct: 205 SFVTNGEWDL 214
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 32.3 bits (70), Expect = 0.019
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 358 TALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
T +A + G V W + + + +P D QTC KFGS ++ +++D
Sbjct: 136 TLTKAILHYTGKVIWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGNQID 189
Score = 24.2 bits (50), Expect = 5.1
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 299 EWGCSTWL-VSSERLWRPDVVL 361
E+G T L V SE +W PD+VL
Sbjct: 103 EYGGVTELYVPSEHIWLPDIVL 124
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.034
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IY 543
V NNGS ++ + + + +P D Q C KFGS ++ ++D + I
Sbjct: 113 VRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDESGGDIS 172
Query: 544 SMFESGAWDV 573
S +G W++
Sbjct: 173 SFITNGEWEL 182
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 29.5 bits (63), Expect = 0.14
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKR 279
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 280 LSWNA---GXVGLQHLAG--------VLGTLVEA*RGTAL--RARVSNNGSVSWIKRLDI 420
L WN G V H+ VL + + +A + + G V W
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIY 144
Query: 421 STPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+ + ++ +P D QTC KFGS ++ +D
Sbjct: 145 KSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVD 177
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL 361
G T V SE +W PD+VL
Sbjct: 94 GVDTLHVPSEHIWLPDIVL 112
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,740
Number of Sequences: 2352
Number of extensions: 16075
Number of successful extensions: 64
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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