Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K03
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 37 3e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.001
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 34 0.002
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.006
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.006
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 32 0.006
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 31 0.010
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.031
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.031
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.054
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.072
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.072
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.22
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.22
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.22
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.29
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.88
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.88
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.88
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.88
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.6
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.8 bits (101), Expect = 1e-06
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGXVGLQHLAGVLGTL--------------VEA*RGTALRARVSNNGSVSWI 405
+D+RL++ G L +L + + R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 406 KRLDISTPISMQLDNWPNDMQTCTFKFGS 492
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 42.3 bits (95), Expect = 5e-06
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAG----- 324
K+ VN L ++ N+ E ++ L+ W D +L W+ G +G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 325 ---VLGTLVEA*RGTALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 489
VL + ++ V NG V W+ + ++ + +P D QTC KFG
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFG 170
Query: 490 SRMHNSDEMDFVI--DKRIYSM---FESGAWDV 573
S N D++ + +K + ++SG WD+
Sbjct: 171 SWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 41.5 bits (93), Expect = 1e-05
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM-- 549
V ++GSVS + + + +WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDG 210
Query: 550 -FESGAWDVTALSS 588
+ WD + +
Sbjct: 211 YTNNSKWDFKVIKA 224
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.7 bits (81), Expect = 3e-04
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLQMNWIDKRLSWNAGXVG--------LQHL---AGVLGTLVEA*RG--TALRAR 375
+ L+ W D + W+ G +H+ VL + G T +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+ G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 299 EWGCSTWL-VSSERLWRPDVVL 361
E+G T L V SE +W PD+VL
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVL 109
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGXVG-----------------LQHLAGVLGTLVEA*RGTALRARVSNN 387
+ W L+W + + H +G +E ++ V N+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEM---PSVECIVFNS 144
Query: 388 GSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSDEM 516
G++ + TP+ + D+ WP D+ CT S H S+E+
Sbjct: 145 GTILCVP-FTTYTPVC-EYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +2
Query: 332 ERLWRPDVVLLSAP---VYLITAPS 397
ER+WRPD + V+ IT P+
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPN 139
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+A + G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL 361
G V SE +W PD+VL
Sbjct: 104 GVEMLYVPSENIWLPDIVL 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.003
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 20/162 (12%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNA---GXVGLQHLAG--------VLGTLVEA*RGTALRARVSNN--GS 393
++ +W D +L W+ G V + H+ VL + L + + N G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 394 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 101 VPSDHIWRPDIVL 113
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.003
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWNAGXVGLQHLAGVLGTLV--------EA*RG-------TALRARVSNNGSVSWIKRL 414
L +N L++L + V G + R+ NGSV + R+
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRI 154
Query: 415 DISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
++ M L +P D Q C+ + S +D++ F+
Sbjct: 155 SLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 361 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
A +A + + G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 105 VPSDHIWRPDIVL 117
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.006
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IY 543
V NNG+ ++ + + + +P D Q C KFGS ++ ++D + I
Sbjct: 130 VKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDIS 189
Query: 544 SMFESGAWDV 573
S +G WD+
Sbjct: 190 SFITNGEWDL 199
Score = 21.8 bits (44), Expect = 8.2
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 323 VSSERLWRPDVVLLSA 370
+ RLW+PDV++ ++
Sbjct: 100 IPPHRLWKPDVLMYNS 115
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 31.5 bits (68), Expect = 0.010
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 20/171 (11%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRIQADLQMNWIDKRLSWNA---GXVGLQHLAG--------VLGTLVEA*RGTAL-- 366
T + ++ W D +L WN G V H+ VL + +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 123
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
Score = 25.0 bits (52), Expect = 0.88
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVL 361
G T V SE +W PD+VL
Sbjct: 91 GVDTLHVPSEHIWLPDIVL 109
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 367 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
+A V +G V W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 323 VSSERLWRPDVVL 361
V S+ +WRPD+VL
Sbjct: 105 VPSDHIWRPDIVL 117
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.031
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.031
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG----LQHLAGVL--------GTLVEA*R 354
++ E + A L++ W+D L WN G L+ L + E
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 355 GT-ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 528
GT V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 391 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 531
++ ++ +L + +M +P+D Q C + S H +DEM F D
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.7 bits (61), Expect = 0.072
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +1
Query: 400 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
++ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 28.7 bits (61), Expect = 0.072
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 516
+ +G V RL + ++L+ +P D+Q C F S HN +M
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 492
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +1
Query: 376 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 519
VS+ G V W+ + + ++ +P D Q C K+ S ++ +++
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.88
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.88
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.88
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.88
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 373 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 525
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 581 CPVRCXARTVARWKLAWQCS 640
C VRC A + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,046
Number of Sequences: 438
Number of extensions: 4272
Number of successful extensions: 75
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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