Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K01
(839 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 33 0.004
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 33 0.004
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 31 0.011
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 30 0.020
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.32
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 25 0.56
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 1.7
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 3.0
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.0
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 7.0
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 7.0
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.2
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.2
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.004
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G + V +NGS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 514 QTC 522
Q C
Sbjct: 140 QHC 142
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 320
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.004
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Frame = +1
Query: 319 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 471
G T V SE +W PD +N ATT+ ++ RV ++GS++ RL I+
Sbjct: 108 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSITRSIRLTIT 164
Query: 472 TPISMQLDNWPNDMQTCTFQV 534
M L P D Q C ++
Sbjct: 165 ASCPMNLQYLPMDRQLCHIEI 185
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 31.1 bits (67), Expect = 0.011
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G + V +NGS ++ + + + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDD 139
Query: 514 QTC 522
Q C
Sbjct: 140 QHC 142
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 320
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 514 QTC 522
Q C
Sbjct: 140 QHC 142
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 514 QTC 522
Q C
Sbjct: 140 QHC 142
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 30.3 bits (65), Expect = 0.020
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 514 QTC 522
Q C
Sbjct: 140 QHC 142
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 320
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.32
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 409 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 510
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 25.4 bits (53), Expect = 0.56
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 715 RGASPERHLEHCHASFHLATVLAL-HRTGQSRHIP 614
+ +P L HCH FH+ +AL + G+ +P
Sbjct: 593 KATNPGYWLFHCHIEFHVEVGMALVFKIGEDYEMP 627
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -2
Query: 229 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 83
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +3
Query: 30 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVV 197
+C ++ T + F TC I +CE + +D ++ R+ KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 456 LYPG-DGAVIRYTGAESVVPGGGC 388
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -3
Query: 693 IWNIATRASTSPRSWLCTALDRAVTSHAP 607
+W I A W+C L +A+ S P
Sbjct: 224 LWFINCTAKGRVAVWMCNNLHKALESRNP 252
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -3
Query: 693 IWNIATRASTSPRSWLCTALDRAVTSHAP 607
+W I A W+C L +A+ S P
Sbjct: 224 LWFINCTAKGRVAVWMCNNLHKALESRNP 252
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 308 RXSGAAALGWCPRN 349
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 715 RGASPERHLEHCHASFHL 662
R +P L HCH FH+
Sbjct: 660 RADNPGYWLFHCHFLFHI 677
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 110 AFCRTSYSTSEEKR*QNNIS 51
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,761
Number of Sequences: 336
Number of extensions: 3941
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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