Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_K01
(839 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 39 2e-04
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 39 2e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 38 5e-04
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 36 0.002
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 36 0.002
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 36 0.002
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 34 0.005
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 34 0.006
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 34 0.006
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 0.31
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 2.2
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 2.9
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 6.6
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 44.8 bits (101), Expect = 3e-06
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 504
V S+ +WRPD+VL N A G Y + +A V NNG V W + S+ ++ +P
Sbjct: 104 VPSDHIWRPDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFP 160
Query: 505 NDMQTCTFQV 534
D+QTC ++
Sbjct: 161 YDVQTCVLKL 170
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 39.1 bits (87), Expect = 2e-04
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
V S+ +WRPD+VL NA A +A + + G V W + + ++ +P D
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163
Query: 514 QTCTFQ 531
QTC +
Sbjct: 164 QTCVLK 169
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 38.7 bits (86), Expect = 2e-04
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
V S+ +WRPD+VL NA A +A ++ G V W + + ++ +P D
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159
Query: 514 QTCTFQ 531
QTC +
Sbjct: 160 QTCVMK 165
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 346 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 514 QTC 522
QTC
Sbjct: 163 QTC 165
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 35.9 bits (79), Expect = 0.002
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 352 LWRPDVVLLN-AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 525
+WRPDVVL N A + Y V + G V W+ + + + WP D Q C
Sbjct: 118 VWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCI 177
Query: 526 FQV 534
++
Sbjct: 178 VKI 180
Score = 33.1 bits (72), Expect = 0.011
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 147 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXV 317
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 318 G 320
G
Sbjct: 106 G 106
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 35.5 bits (78), Expect = 0.002
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 319 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 486
G V SE++W PD+VL N G+Y + +A + G V W + M
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEM 156
Query: 487 QLDNWPNDMQTC 522
++ +P D QTC
Sbjct: 157 NVEYFPYDEQTC 168
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 35.5 bits (78), Expect = 0.002
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 313 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTP 477
E+G T L V SE +W PD+VL N A G+Y + +A + G V W +
Sbjct: 103 EYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTLTKAILHYTGKVIWTPPAIFKSS 159
Query: 478 ISMQLDNWPNDMQTC 522
+ + +P D QTC
Sbjct: 160 CEIDVRYFPFDQQTC 174
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 35.1 bits (77), Expect = 0.003
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
+ RLW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 83 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142
Query: 514 QTC 522
Q C
Sbjct: 143 QRC 145
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 35.1 bits (77), Expect = 0.003
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 319 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 486
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 94 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 150
Query: 487 QLDNWPNDMQTC 522
++ +P D QTC
Sbjct: 151 DVEYFPFDEQTC 162
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 34.3 bits (75), Expect = 0.005
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
+ R+W+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 115 IPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 174
Query: 514 QTC 522
Q C
Sbjct: 175 QRC 177
Score = 24.2 bits (50), Expect = 5.0
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 33 CHKMSTTY--IILLPFLLTCAIASAAECENATSLSLMIDS---LLATYDRDSPPDSKIVV 197
C+K Y II+L + +I A L ++DS L +S P ++
Sbjct: 10 CYKQLRIYKWIIVLMLIANSSILCMAGYNEKRLLHDLLDSYNILERPVVNESDP-LQLSF 68
Query: 198 NLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXVG 320
LTL ++ ++ E + L++ W D L WN G
Sbjct: 69 GLTL-MQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYG 108
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.006
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 514 QTC 522
Q C
Sbjct: 160 QHC 162
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.006
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 513
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 514 QTC 522
Q C
Sbjct: 160 QHC 162
Score = 26.2 bits (55), Expect = 1.2
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 135 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 299
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 300 WNAGXVG 320
WN G
Sbjct: 87 WNDSEYG 93
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 28.3 bits (60), Expect = 0.31
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 645 RARTVARWKLAWQCSRCLSGDAPRHTRW 728
R T+ W+ W L DA RHTRW
Sbjct: 930 RQNTIDCWQEEWDAD-ALQQDASRHTRW 956
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 645 RARTVARWKLAWQCSRCLSGDAPRHTRW 728
R T+ +W+ W D RHTRW
Sbjct: 870 RQATIEQWQQQWDAE----ADTSRHTRW 893
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 645 RARTVARWKLAWQCSRCLSGDAPRHTRW 728
R RT+ W+ W D R+TRW
Sbjct: 937 RQRTITMWQSQWDAE----ADTSRYTRW 960
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 674 ELPPRHGPGSAPHWTEPSHPT 612
ELPP H + P + + S PT
Sbjct: 1077 ELPPEHSDVTTPDYDQRSTPT 1097
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,720
Number of Sequences: 2352
Number of extensions: 17780
Number of successful extensions: 74
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -