Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J24
         (984 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    29   0.28 
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       25   2.6  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 0.28
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 169 VNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
           V   + + H  I E +ST+ +   ++ +W D  L W    +G
Sbjct: 65  VETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASYG 106


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 105 LMIDSLLXNVRSGVSPRLQNRSQPD 179
           L + SL    RS +SP L   SQPD
Sbjct: 360 LGVSSLFQAERSNLSPMLNEESQPD 384


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,988
Number of Sequences: 2352
Number of extensions: 6157
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107707938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)