Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J24
(984 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 34 0.18
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 34 0.18
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 33 0.31
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 33 0.41
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 32 0.54
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 32 0.54
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.54
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 32 0.54
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 32 0.54
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 31 0.95
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 29 3.8
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 28 8.9
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.18
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 166 VVNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIW 276
+V++ H+ H I + E T+ + + M W D+ L+W
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVW 110
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.18
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 166 VVNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIW 276
+V++ H+ H I + E T+ + + M W D+ L+W
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVW 110
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIWXAGEWGCST 303
YD E+P + L +L+ ++E + + ++ ++ W D L W A W +T
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTT 119
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +1
Query: 130 TYDRESPPDSKIVVNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIWXAGEWGCS 300
TY + +K+V ++ + + I E V++ ++W D + W +WG S
Sbjct: 74 TYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWGLS 130
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
++ +PPD + V L L H I E + T+ +L + +W+D L W +G
Sbjct: 78 HNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFG 132
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 133 YDRESPPDSKIVVNLTLHLRHA-HIRESESTVRILADLQMNWIDKXLIWXAGEW 291
+++ SPPD ++ ++ + L H I E +++L + W D L W E+
Sbjct: 81 HNKCSPPDGRVDISHNIELVHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEF 134
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 148 PPDSKIVVNLTLHLRHAHIRESESTVRILADLQMNWIDKXLIWXAGEWG 294
PP +I + L++ ++ + E E L D + +W D L W ++G
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 241 LQMNWIDKXLIWXAGEWG 294
L+M W D L+W G WG
Sbjct: 77 LEMQWFDYRLMWDPGRWG 94
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 151 PDSKIVVNLTL---HLRHAHIRESESTVRILADLQMNWIDKXLIWXAGEW 291
PD+ N TL +L+ + E E V ++ +L W D L W A ++
Sbjct: 67 PDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDY 116
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 241 LQMNWIDKXLIWXAGEWG 294
L+M W DK L W +WG
Sbjct: 81 LEMQWYDKKLTWNPTDWG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,938,505
Number of Sequences: 27780
Number of extensions: 143151
Number of successful extensions: 371
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2563248310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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