Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J20
(850 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 5e-08
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 54 1e-07
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 3e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 4e-05
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 5e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 4e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 42 8e-04
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 41 0.001
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.001
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 40 0.003
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.004
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 39 0.004
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.006
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 38 0.008
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 38 0.010
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 37 0.018
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.024
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.39
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 33 0.39
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 32 0.68
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 30 2.1
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 30 2.7
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.6
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 3.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 29 3.6
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.8
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 29 6.3
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 6.3
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57) 28 8.3
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73) 28 8.3
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 55.6 bits (128), Expect = 5e-08
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDPPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
++ LL Y +D P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 305 WNAGEWG-CGTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 463
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 464 LDISTPISMQLDNWPNDMQTC 526
I + + + +P D+Q+C
Sbjct: 155 AIIKSECKIDVRFFPFDVQSC 175
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDPPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+++ L Y +D P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 305 WNAGEW-GCGTWLVSSERLWRPDVVLLN 385
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 54.4 bits (125), Expect = 1e-07
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLL 382
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 383 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQVRF 544
N+A + +R +++ G V W+ L + T M + ++P D Q C ++RF
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQAC--ELRF 134
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAATTAGD-- 409
E +++ ++ W + LSWNA E+G + + + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 410 YALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
Y +A+ VS+ G W+ ++T + + +P D Q+CT +
Sbjct: 164 YGFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 52.0 bits (119), Expect = 6e-07
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +2
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCGTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 421
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 422 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
V +NG V W+ + + + M + ++P D Q C
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYC 129
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +2
Query: 224 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLLNAA-AT 397
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 398 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
++G+ + + + ++G+V W+ + + + + + N+P D Q C +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLE 307
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAATTAGDYALRARV------ 430
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 431 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
S++GS +W+ I T + + +P D+Q C
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYC 117
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +2
Query: 215 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCGTWLVSSERLWRPDVVLL-NA 388
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 389 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
T AG Y S++G+ W ++ ++ + +P D Q C+ +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 152 LLATYDRDPPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 317 EW-GCGTWLVSSERLWRPDVVLLNAA 391
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCGTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 445
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 446 VSWIKRLDISTPISMQLDNWPNDMQTCT 529
V WI + ++ ++++ WP D Q CT
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAA----T 397
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 398 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
R V ++G+V W+ I + + + +P D Q C
Sbjct: 594 ITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 MNWIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLLNAA 391
+ W++ LSWNA E+G T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 436
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
NG W +I + ++ + +P D Q C
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFC 153
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA--ATTAGD----------Y 412
+ + W + LSWNA E+G + + VS +R W PD++L N+ +A + Y
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKY 80
Query: 413 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
+ + +NG SW+ + + +P D Q CT +
Sbjct: 81 KTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 448
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 449 SWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
W+ + S+ ++++ +P D Q C+ +
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEW-GCGTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSN 436
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+GS +W + + + +P D QTC
Sbjct: 105 DGSSAWFSPASFRSTCKIDVTYFPFDEQTC 134
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWGCGTWLVSSER--LWRPDVVLLN 385
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 436
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+G+ +W+ +T + + +P D Q C
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQEC 133
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCGTWLVSS----ER 355
++VV+L + + +++ ++ I L+ W D L +N ++ + ++
Sbjct: 78 QVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASYATLNYALVDK 136
Query: 356 LWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 520
+W+PD L N AG D +L RV NG+V++ R+ + M+ N+P D Q
Sbjct: 137 IWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMDRQ 196
Query: 521 TC 526
+C
Sbjct: 197 SC 198
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 433
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 434 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 535
N G W + + SM L WP D QTC +
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 439
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G + W + T + + +P D QTC
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 529
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLL-NAAATTAG---DYAL 418
V + + + W + L+W+ +G T + V R+WRPD++L NA T G +
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYT 128
Query: 419 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+ ++ +GS W+ + + + +P D Q+C
Sbjct: 129 KVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQSC 164
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 439
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQ 520
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +2
Query: 284 WIDKRLSWNA-GEWGCGTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 442
W D L W ++ S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 443 SVSWIKRLDISTPISMQLDNWPNDMQTCT 529
V W+ ++ +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.024
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRD--PPPDSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 280
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 281 NWIDKRLSWNAGEWGCGTWL-VSSERLWRPDVVLLN 385
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -3
Query: 467 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCRSPTPLRSNSVVCR 288
P + R +SR H R + R+ L+ + PR S+ T K +SP+ R S R
Sbjct: 275 PPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARR 334
Query: 287 SNSFE 273
S S E
Sbjct: 335 SRSIE 339
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 353 RLWRPDVVLLNA--AATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQ 520
++WRPD NA ++ TA D + + ++ NG V + + I+ M+L ++P D Q
Sbjct: 34 KMWRPDPFCYNARESSLTASDDDINSMMTIHPNGDVVYSRMTIITAECEMKLHDFPMDEQ 93
Query: 521 TC 526
C
Sbjct: 94 QC 95
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCGTWLVSSERLWRP 367
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 368 DVVLLN 385
D+VL N
Sbjct: 127 DIVLYN 132
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = +1
Query: 115 RKRNITVPHDRLAPRNVRSGPPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 294
R+ N H R A + SGPP R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 295 TTELE 309
+ + E
Sbjct: 484 SRDSE 488
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 31.9 bits (69), Expect = 0.68
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Frame = +2
Query: 140 MIDSLLATYDRDPPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSW 307
++ +L YD+ P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 308 NAGEWGCGTWLVSSER---LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDIST 478
++ +R +W PD NA + + NG + + R +
Sbjct: 136 GYR----ALLSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKG 191
Query: 479 PISMQLDNWPNDMQTCT 529
M L N+P D+Q C+
Sbjct: 192 ACQMDLFNFPLDVQRCS 208
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 356 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
Query: 527 TFQV 538
+
Sbjct: 98 NLSI 101
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 284 WIDKRLSWNAGEW-GCGTWLVSSERLWRPDVVL 379
W + L+WN E+ G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 520
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 521 TC 526
C
Sbjct: 92 VC 93
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 173
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 173
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 425 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 538
R+ NG++ + RL +++ M L N+P D Q C ++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKM 101
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 332 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 442
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 29.1 bits (62), Expect = 4.8
Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRDPPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMN 283
E A + + +D L ++ D+ P +VV + +++ + I + ++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 284 WIDKRLSWNAGEWGCGTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 448
W D RL+++ E + ++ +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPEAITVQGGMLND-IWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 449 SWIKRLDISTPISMQLDNWPNDMQTCTFQV 538
R+ ++ M L +P D QTC +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNI 188
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 529
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 284 WIDKRLSWNAGEWG-CGTWLVSSERLWRPDVVLLN 385
W ++ L+W+ E+G T V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 469 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-LPCVPTQS 296
VQ + DG + Y S VP G S + V+P QA G +P A P +P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 295 FVDP 284
+ P
Sbjct: 1232 AIRP 1235
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 221 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCGTWLVSSERLWRPDVVLLN 385
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 529
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57)
Length = 818
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 383 LAVPRQASTSVPRTPAKCRSPTPLRSNSV 297
L++P A++S P TPA SPTP SNS+
Sbjct: 680 LSLPCTAASS-PSTPASSPSPTPPLSNSL 707
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 241 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 137
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
Length = 617
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDPPPDS 190
TC A + N SL L+ D+ L +YD DP D+
Sbjct: 232 TCQQAVLLQPSNNRSLYLLGDAQLRSYDNDPASDN 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,844,000
Number of Sequences: 59808
Number of extensions: 453708
Number of successful extensions: 1465
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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