Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J18
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa... 118 3e-25
UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;... 80 7e-14
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ... 80 7e-14
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 71 3e-11
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;... 62 2e-08
UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n... 55 3e-06
UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ... 54 4e-06
UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative... 54 5e-06
UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3; ... 53 9e-06
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;... 51 5e-05
UniRef50_Q7QQI1 Cluster: GLP_748_557_1225; n=1; Giardia lamblia ... 47 6e-04
UniRef50_O57960 Cluster: Putative uncharacterized protein PH0221... 47 6e-04
UniRef50_A5B940 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q3E811 Cluster: Uncharacterized protein YLR162W-A; n=47... 45 0.002
UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;... 42 0.028
UniRef50_Q4HL63 Cluster: Lipoprotein, putative; n=11; Bacteria|R... 38 0.46
UniRef50_Q4S9Z6 Cluster: Chromosome undetermined SCAF14693, whol... 36 1.4
UniRef50_UPI0000E254D5 Cluster: PREDICTED: plectin 1; n=3; Amnio... 35 2.5
UniRef50_A5ZYV6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A4LZ01 Cluster: Beta-ketoacyl synthase; n=2; cellular o... 34 4.3
UniRef50_O04059 Cluster: Putative 3,4-dihydroxy-2-butanone kinas... 34 4.3
UniRef50_Q4RRS5 Cluster: Chromosome 16 SCAF15002, whole genome s... 33 7.5
UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A6X623 Cluster: Two component transcriptional regulator... 33 9.9
>UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa
group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 55
Score = 118 bits (283), Expect = 3e-25
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +1
Query: 73 MPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSLTLVWHCKET 237
MPRHLISDAHEW+NEIPTVP YLAKPQPRERAW+NQRGKKTLLSLTLVWHC+ET
Sbjct: 1 MPRHLISDAHEWMNEIPTVPTCYLAKPQPRERAWQNQRGKKTLLSLTLVWHCEET 55
>UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 70
Score = 80.2 bits (189), Expect = 7e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = -2
Query: 262 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLD 140
SPTYATPLMSPYNARLESSSTGSSFPA+ KPVPLAVVSLD
Sbjct: 13 SPTYATPLMSPYNARLESSSTGSSFPANFSKPVPLAVVSLD 53
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 132 RDSGNLVNPFMRVTN 88
RDSGNLVNPFMRVTN
Sbjct: 56 RDSGNLVNPFMRVTN 70
>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
50803
Length = 329
Score = 80.2 bits (189), Expect = 7e-14
Identities = 43/62 (69%), Positives = 44/62 (70%)
Frame = -2
Query: 217 LESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPA 38
LESSS GSS PA P PVP A S GQW+ R SIHAR L DEAFGYLKRVIVTPA
Sbjct: 178 LESSSKGSSCPAGRPSPVPEAGGSRRRGSGQWDPRWSIHARRKLPDEAFGYLKRVIVTPA 237
Query: 37 VY 32
VY
Sbjct: 238 VY 239
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 71.3 bits (167), Expect = 3e-11
Identities = 45/80 (56%), Positives = 49/80 (61%)
Frame = -2
Query: 262 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHARH*LD 83
+PTY TPL S + LESSSTGSSFPADS KPVPL VVSLDSR S SIHA
Sbjct: 54 APTYTTPLKSFHKVGLESSSTGSSFPADSAKPVPLVVVSLDSRQDSGISL-SIHAVTNKM 112
Query: 82 DEAFGYLKRVIVTPAVYPRL 23
L+ +P VYPRL
Sbjct: 113 TRHLATLRESCYSP-VYPRL 131
Score = 33.1 bits (72), Expect = 9.9
Identities = 28/70 (40%), Positives = 35/70 (50%)
Frame = -1
Query: 485 MYRPSQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNE 306
M RPSQTP L +SS RI + +LG+K R APLP + +S
Sbjct: 1 MCRPSQTPHLTMSSARIGLQ-------------ASLGSKKRG------SAPLPIHGISKI 41
Query: 305 TMKVVVFQRR 276
T+KVVVF R
Sbjct: 42 TLKVVVFHFR 51
>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
n=4; Eukaryota|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 282
Score = 61.7 bits (143), Expect = 2e-08
Identities = 41/96 (42%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = -3
Query: 720 KSXVXMNXWXPQASYSLWXLXWHLXXK-NSLX*RIDRPCFXESLCVXNXWIKPAFALLTP 544
KS V MN W PQASY K SL R+ + V IK AF LL
Sbjct: 101 KSNVAMNAWLPQASYPCGNFSDTSSFKFRSLKDRL--ATLSRFVFVLEIRIKRAFTLLFH 158
Query: 543 REVSVLAELALGHXRYSLTDVPPQSNSPPGSVLEPD 436
+LGH RY LTDVPPQ NSPP +V PD
Sbjct: 159 TRFLFSLSSSLGHLRYLLTDVPPQPNSPPDNVFRPD 194
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -2
Query: 256 TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR 113
+Y + ++S R++ + FPADS K VPL +VSLDSR GQWE R
Sbjct: 237 SYTSQVISQSRTRVKLNRV--FFPADSAKAVPLLLVSLDSRKGQWEFR 282
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -1
Query: 260 SHLCYTSHVSLQCQTRVKLNRVFFP 186
SHL YTS V Q +TRVKLNRVFFP
Sbjct: 234 SHLSYTSQVISQSRTRVKLNRVFFP 258
>UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry -
Xenopus tropicalis
Length = 154
Score = 54.8 bits (126), Expect = 3e-06
Identities = 39/95 (41%), Positives = 45/95 (47%)
Frame = -3
Query: 720 KSXVXMNXWXPQASYSLWXLXWHLXXKNSLX*RIDRPCFXESLCVXNXWIKPAFALLTPR 541
KS V MN W PQASY + H F + N + +F
Sbjct: 11 KSNVAMNAWLPQASYPCGSIG-H--------------AFTVCIRTENQ-NQMSFYPFVLH 54
Query: 540 EVSVLAELALGHXRYSLTDVPPQSNSPPGSVLEPD 436
E+SVL EL LGH RY LTDVPPQ NSPP +V D
Sbjct: 55 EISVLVELILGHLRYLLTDVPPQPNSPPDNVFHLD 89
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2
Query: 85 DDEAFGYLKRVIVTPAVYPRL 23
+DEAFGYLKRVIVTPAVYPRL
Sbjct: 113 NDEAFGYLKRVIVTPAVYPRL 133
>UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 70
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 229 YNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQ 125
+ RLESSSTGSSFPAD KPVPLA+ SLDSR GQ
Sbjct: 19 HKVRLESSSTGSSFPADYSKPVPLAMGSLDSRQGQ 53
>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 160
Score = 54.4 bits (125), Expect = 4e-06
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -3
Query: 705 MNXWXPQASYSLWXLXWHLXXKNSLX*RIDRPCFXES--LCVXNXWIKPA-FALLTPREV 535
MN W PQASY + +SL R + + +C+ F E+
Sbjct: 1 MNAWLPQASYPCG----NFSGTSSLKCRGSKGSIGHTFMVCIHTENQNQGDFYPFVLLEI 56
Query: 534 SVLAELALGHXRYSLTDVPPQSNSPPGSVLEPDHAGVL 421
SVL E LGH RY LTDVPPQ NSPP +V D A +L
Sbjct: 57 SVLHESPLGHLRYRLTDVPPQPNSPPDNVSNSDQAYML 94
Score = 53.6 bits (123), Expect = 7e-06
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -1
Query: 329 PPNRVSNETMKVVVFQRRSRETISHLCYTSHVSLQCQTRVKLNRVFF 189
P + +S ETM+VVVF RR SHL YT HVS QCQTRVKLN +
Sbjct: 97 PLHWISKETMEVVVFHRRRS---SHLFYTLHVSSQCQTRVKLNHAAY 140
>UniRef50_A5K5F4 Cluster: Senescence-associated protein, putative;
n=1; Plasmodium vivax|Rep: Senescence-associated
protein, putative - Plasmodium vivax
Length = 131
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = -3
Query: 564 AFALLTPREVSVLAELALGHXRYSLTDVPPQSNSPPGSV 448
+F+ + +E+SVL+EL GH RY LTDVPPQSNSPP V
Sbjct: 69 SFSPFSLQEISVLSELVFGHLRYYLTDVPPQSNSPPDYV 107
>UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3;
Thermoproteaceae|Rep: RRNA intron-encoded endonuclease -
Thermoproteus sp. IC-061
Length = 234
Score = 53.2 bits (122), Expect = 9e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1
Query: 91 SDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSLTLVWHC 228
S HEWINE+PTVP A P P ++W+ +RG+K+L S T C
Sbjct: 177 SGVHEWINEVPTVPARGPANPPPGAQSWDPRRGEKSLWSFTAACRC 222
>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
n=3; Eukaryota|Rep: Putative senescence-associated
protein - Plasmodium yoelii yoelii
Length = 205
Score = 50.8 bits (116), Expect = 5e-05
Identities = 38/91 (41%), Positives = 45/91 (49%)
Frame = -3
Query: 720 KSXVXMNXWXPQASYSLWXLXWHLXXKNSLX*RIDRPCFXESLCVXNXWIKPAFALLTPR 541
KS V N W PQASY S+ F ES N + +F+ + +
Sbjct: 11 KSYVAKNAWQPQASYPC----------GSIGHAFTFSTFSES---RN---QTSFSPFSLQ 54
Query: 540 EVSVLAELALGHXRYSLTDVPPQSNSPPGSV 448
E+SVL EL GH Y LTDVPPQSNSP G V
Sbjct: 55 EISVLFELVFGHLCYFLTDVPPQSNSPSGYV 85
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2
Query: 82 DEAFGYLKRVIVTPAVY 32
DE FGYLKRVIVTPAVY
Sbjct: 144 DETFGYLKRVIVTPAVY 160
>UniRef50_Q7QQI1 Cluster: GLP_748_557_1225; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_748_557_1225 - Giardia lamblia ATCC
50803
Length = 222
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = +3
Query: 105 MD*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSSLAL 227
MD R SHCP E A GTG G AG+EDP ELDSS L
Sbjct: 1 MDQRGSHCPEPRLREPPASGTGEGRPAGQEDPFELDSSPGL 41
>UniRef50_O57960 Cluster: Putative uncharacterized protein PH0221;
n=2; Pyrococcus|Rep: Putative uncharacterized protein
PH0221 - Pyrococcus horikoshii
Length = 235
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/56 (51%), Positives = 31/56 (55%)
Frame = -2
Query: 199 GSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPAVY 32
GSS P P A VS GQ R +IHA L D+ F YLKRVIVTPAVY
Sbjct: 2 GSSLPTGGPWHARQAEVSPGPGRGQRGPRYAIHAGRHLTDKEFRYLKRVIVTPAVY 57
>UniRef50_A5B940 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3
Query: 540 EVSVLAELALGHXRYSLTDVPPQSNSPPGSV 448
E+ VL +L LGH RY LTDV PQ NSPP +V
Sbjct: 53 EIFVLVKLILGHLRYLLTDVSPQPNSPPDNV 83
>UniRef50_Q3E811 Cluster: Uncharacterized protein YLR162W-A; n=47;
Eukaryota|Rep: Uncharacterized protein YLR162W-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 62
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -3
Query: 540 EVSVLAELALGHXRYSLTDVPPQSNSP 460
E+SVL E LGH RY LTDVPPQ NSP
Sbjct: 21 EISVLHESPLGHLRYRLTDVPPQPNSP 47
>UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 421
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 82 HLISDAHEWINEIPTVPIYYLAKP 153
HLISDAHEWIN+ PT+ +YY KP
Sbjct: 398 HLISDAHEWINKNPTILVYYPTKP 421
>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 440
Score = 41.5 bits (93), Expect = 0.028
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 484 CTAPVKLPAWQCPRTGSR 431
CTAPVKLP W CPR+GSR
Sbjct: 75 CTAPVKLPTWHCPRSGSR 92
>UniRef50_Q4HL63 Cluster: Lipoprotein, putative; n=11; Bacteria|Rep:
Lipoprotein, putative - Campylobacter lari RM2100
Length = 97
Score = 37.5 bits (83), Expect = 0.46
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -2
Query: 151 VSLDSR*GQWESR*SIHARH*LDDEAFGYLKRVIVTPAVY 32
+SLD Q SR +IHA L D+ F YL+ VIVT AVY
Sbjct: 50 ISLDPSLRQLPSRYAIHAGRYLTDKEFRYLRTVIVTAAVY 89
>UniRef50_Q4S9Z6 Cluster: Chromosome undetermined SCAF14693, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14693, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 125
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2
Query: 280 DDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*G 128
++ K SP TP +SP+++ L SS+ S P SP P P AV+ + + G
Sbjct: 41 EEGGKASPEQDTPPVSPHSSLLSPSSSCSPPPFYSPPPSPTAVLFCEDKAG 91
>UniRef50_UPI0000E254D5 Cluster: PREDICTED: plectin 1; n=3;
Amniota|Rep: PREDICTED: plectin 1 - Pan troglodytes
Length = 4393
Score = 35.1 bits (77), Expect = 2.5
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = -2
Query: 514 LRTXALFFDRCTAPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTAH 335
LR A F R + A +C R G R S+ R R R H LER P L+ A
Sbjct: 125 LRDRAPFTSRTPVLLGTGAGECARVGMRASWLRPRCRCTRPHCGLLERRPGLTPGLAAAE 184
Query: 334 RFRPT 320
RPT
Sbjct: 185 LPRPT 189
>UniRef50_A5ZYV6 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 114
Score = 35.1 bits (77), Expect = 2.5
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2
Query: 481 TAPVKLPAWQCPRTGSR 431
TAPVKLP W CP GSR
Sbjct: 55 TAPVKLPVWHCPTAGSR 71
>UniRef50_A4LZ01 Cluster: Beta-ketoacyl synthase; n=2; cellular
organisms|Rep: Beta-ketoacyl synthase - Geobacter
bemidjiensis Bem
Length = 2396
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -2
Query: 214 ESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHAR 95
ES +T S PA K P+AVV LD+R G+W+ S AR
Sbjct: 451 ESEATASPAPA---KGCPIAVVGLDARFGEWQDLTSFQAR 487
>UniRef50_O04059 Cluster: Putative 3,4-dihydroxy-2-butanone kinase;
n=12; Magnoliophyta|Rep: Putative
3,4-dihydroxy-2-butanone kinase - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum)
Length = 594
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 514 LRTXALFFDRCTAPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILS 344
++ DR AP K P W G+R K PP HS ++E+ RP LS
Sbjct: 322 MKADQAILDRLDAPTKAPNWPVGAEGNRPPAKIPVPLPP-SHSIKIEKTLSRPEKLS 377
>UniRef50_Q4RRS5 Cluster: Chromosome 16 SCAF15002, whole genome
shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 16
SCAF15002, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1278
Score = 33.5 bits (73), Expect = 7.5
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 379 LERNTVRPPILSTAHRFRPTE*VMKQ*K*WFFSDDRA-KRSPTYATPLMSP-YNARLESS 206
L R RP IL T+ E ++ FS + SPT SP Y+A + +
Sbjct: 1059 LVRPPPRPGILRTSRSLEMPEITLQPSATVSFSRRSSLTTSPTQGARQPSPSYHAHMSYA 1118
Query: 205 STGSSFPADSPKPVP 161
ST +S+P+ SP P P
Sbjct: 1119 STAASYPSQSPSPPP 1133
>UniRef50_A4VF70 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 116
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +1
Query: 457 RRGV*LGRYICQRITXVS*GQLSEDRNLAWSQKGKSWL 570
R GV LGR CQ IT S QLSE+ NL +++ K+ L
Sbjct: 3 RGGVCLGRNACQTITQASQVQLSENGNLTQNKRVKATL 40
>UniRef50_A6X623 Cluster: Two component transcriptional regulator,
LuxR family; n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Two component transcriptional regulator, LuxR family -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 251
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 576 WIKPAFALLTPREVSVLAELALGH 505
W +PA TPREV VL EL GH
Sbjct: 177 WCQPAITGFTPREVDVLTELQRGH 200
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,232,963
Number of Sequences: 1657284
Number of extensions: 14952691
Number of successful extensions: 38769
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 36957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38748
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -