BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_J17 (901 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 60 2e-09 SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 2e-09 SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 2e-09 SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 3e-08 SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08 SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07 SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 52 6e-07 SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06 SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05 SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05 SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05 SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05 SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 47 2e-05 SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05 SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 47 2e-05 SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05 SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04 SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04 SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04 SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 43 4e-04 SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 41 0.002 SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.002 SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005 SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 39 0.006 SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.006 SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.011 SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.015 SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 33 0.24 SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 32 0.73 SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.73 SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73 SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 32 0.73 SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 31 0.96 SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.3 SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.7 SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.2 SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.9 SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9 SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.1 SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 5.1 SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 29 5.1 SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 5.1 SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1 SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 8.9 >SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) Length = 342 Score = 60.1 bits (139), Expect = 2e-09 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Frame = +1 Query: 172 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 348 LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80 Query: 349 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 N+A + +R +++ G V W+ L + T M + ++P D Q C + GS Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136 >SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 716 Score = 60.1 bits (139), Expect = 2e-09 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Frame = +1 Query: 250 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 414 W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178 Query: 415 SWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 W+ ++T + + +P D Q+CT K GS + + +D Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 219 >SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 541 Score = 60.1 bits (139), Expect = 2e-09 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 12/156 (7%) Frame = +1 Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270 ++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94 Query: 271 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 429 WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+ Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154 Query: 430 LDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 I + + + +P D+Q+C GS H ++D Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190 Score = 41.1 bits (92), Expect = 0.001 Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Frame = +1 Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270 +++ L Y +++ P D + + L + LR ++ E E + ++ W D L Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512 Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLN 351 WN ++ G + +++ +++W+PDV+L N Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540 >SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 422 Score = 56.4 bits (130), Expect = 3e-08 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 11/127 (8%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 396 +++ W D L+WN ++G + V +W+PD++L N A+T +L ++ Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85 Query: 397 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDFVIDKR----IYS 564 S++GS +W+ I T + + +P D+Q C K GS H ++D + K I Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRKTTGVDIDD 145 Query: 565 MFESRAW 585 E+R W Sbjct: 146 YSENREW 152 >SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 686 Score = 56.0 bits (129), Expect = 4e-08 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = +1 Query: 190 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 363 H + + TV L W D L+WN ++G + V +W PD+VL N + Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258 Query: 364 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 ++G+ + + + ++G+V W+ + + + + + N+P D Q C + GS Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310 >SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 724 Score = 52.8 bits (121), Expect = 4e-07 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 8/131 (6%) Frame = +1 Query: 217 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 387 T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ + Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91 Query: 388 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDF-VIDKR 555 V +NG V W+ + + + M + ++P D Q C K S E+ +D Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDND 151 Query: 556 IYSMF-ESRAW 585 + + ES W Sbjct: 152 VRQNYSESSEW 162 >SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) Length = 445 Score = 52.0 bits (119), Expect = 6e-07 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 13/122 (10%) Frame = +1 Query: 223 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 375 +++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A + Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75 Query: 376 ----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDFV 543 Y + + +NG SW+ + + +P D Q CT + GS + ++D Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQ 135 Query: 544 ID 549 ID Sbjct: 136 ID 137 >SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 548 Score = 50.8 bits (116), Expect = 1e-06 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Frame = +1 Query: 181 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 354 HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165 Query: 355 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 T AG Y S++G+ W ++ ++ + +P D Q C+ K GS Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220 >SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 506 Score = 48.0 bits (109), Expect = 1e-05 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Frame = +1 Query: 220 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 384 + I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98 Query: 385 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 +S +GS +W + + + +P D QTC K GS + ++D Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVD 149 >SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 705 Score = 48.0 bits (109), Expect = 1e-05 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 402 + + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + + Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123 Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 NG W +I + ++ + +P D Q C K GS Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGS 159 >SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 275 Score = 47.6 bits (108), Expect = 1e-05 Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 402 + + W + ++WN E+G + + LW+PD+ L N A + + + + +V+ Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103 Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 +G+ +W+ +T + + +P D Q C K GS + ++ +D Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVD 148 >SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 47.6 bits (108), Expect = 1e-05 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 14/156 (8%) Frame = +1 Query: 136 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 303 R S PD ++VV+L + + +++ ++ I L+ W D L +N +++ Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126 Query: 304 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 456 + +++W+PD L N AG D +L RV NG+V++ R+ + M Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186 Query: 457 QLDNWPNDMQTCTFKXGSRMHXSDEMDFVI-DKRIY 561 + N+P D Q+C S DE+ ++ D RIY Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIY 222 >SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) Length = 479 Score = 47.2 bits (107), Expect = 2e-05 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 5/92 (5%) Frame = +1 Query: 250 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 414 W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99 Query: 415 SWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 W+ + S+ ++++ +P D Q C+ K GS Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131 >SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 648 Score = 46.8 bits (106), Expect = 2e-05 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Frame = +1 Query: 250 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 411 W D L W+ ++ S + +W PDV L+N AG L V +G Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463 Query: 412 VSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDFVID 549 V WI + ++ ++++ WP D Q CT S + E+ +D Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMD 509 >SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) Length = 240 Score = 46.8 bits (106), Expect = 2e-05 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Frame = +1 Query: 241 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 399 + W + L W+ ++ + + +W PD+ LLN T AG ++ V Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182 Query: 400 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEM 534 N G W + + SM L WP D QTC K GS + S+ M Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227 >SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 930 Score = 45.6 bits (103), Expect = 6e-05 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 402 L+M W D L WN ++G T + + + +W P V++ N A + R V + Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606 Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 +G+V W+ I + + + +P D Q C GS + ++D Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651 >SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) Length = 373 Score = 43.6 bits (98), Expect = 2e-04 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Frame = +1 Query: 118 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282 L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79 Query: 283 EW-GCSTWLVSSERLWRPDVVLLNAA 357 + G ++ + RLW PD+ L N A Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105 >SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 312 Score = 43.6 bits (98), Expect = 2e-04 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSN 402 + + W + L+W+ +G T + V R+WRPD++L NA T G + + ++ Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134 Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 +GS W+ + + + +P D Q+C K GS Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGS 170 >SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) Length = 478 Score = 43.2 bits (97), Expect = 3e-04 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +1 Query: 244 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 357 + W++ LSWNA E+G +T V +RLW PD+VL N A Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115 >SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 434 Score = 42.7 bits (96), Expect = 4e-04 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = +1 Query: 241 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 405 + W D L W+ + G T + V LW+PD+VL N Y +V + Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147 Query: 406 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 G + W + T + + +P D QTC GS + ++D Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191 >SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) Length = 147 Score = 40.7 bits (91), Expect = 0.002 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Frame = +1 Query: 250 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 408 W D L W ++ + S + +W PDV L+N A + AG + V G Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61 Query: 409 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDFVID 549 V W+ ++ +++ WP D Q CT S + D+ + +I+ Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTY--DDQEIIIE 106 >SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) Length = 480 Score = 40.3 bits (90), Expect = 0.002 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%) Frame = +1 Query: 106 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 273 ++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+ Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135 Query: 274 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 453 S +W PD NA + + NG + + R + Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194 Query: 454 MQLDNWPNDMQTCTFKXGSRMHXSDEMDF 540 M L N+P D+Q C+ S + ++DF Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQIDF 223 >SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 364 Score = 39.1 bits (87), Expect = 0.005 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 6/93 (6%) Frame = +1 Query: 250 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 411 W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68 Query: 412 VSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 V + + I+ M+L ++P D Q C K GS Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGS 101 >SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) Length = 91 Score = 38.7 bits (86), Expect = 0.006 Identities = 16/65 (24%), Positives = 32/65 (49%) Frame = +1 Query: 316 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 495 +++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+ Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85 Query: 496 FKXGS 510 S Sbjct: 86 ISFES 90 >SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) Length = 362 Score = 38.7 bits (86), Expect = 0.006 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%) Frame = +1 Query: 238 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 405 + + W D RL WN ++G +++ S +LW PD+ L N A + V+++ Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335 Query: 406 GSVSWIKRLDISTPISMQLDNWPNDMQ 486 GS+ W + ++ + +P D Q Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362 >SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) Length = 79 Score = 37.9 bits (84), Expect = 0.011 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = +1 Query: 217 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 351 T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78 >SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) Length = 123 Score = 37.5 bits (83), Expect = 0.015 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Frame = +1 Query: 82 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 246 ++ L L+ D Y++ P D + V + + + + + ++L ++M Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86 Query: 247 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 351 NW + L WNA E+G L +S +W PD+VL N Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122 >SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) Length = 134 Score = 33.5 bits (73), Expect = 0.24 Identities = 14/54 (25%), Positives = 28/54 (51%) Frame = +1 Query: 376 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMD 537 + + +VS+ G W+ ++T + + +P D Q+CT K GS + + +D Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66 >SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) Length = 319 Score = 31.9 bits (69), Expect = 0.73 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 Query: 394 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 V+N G V W + S+++ WP D+Q C+ GS Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59 >SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) Length = 191 Score = 31.9 bits (69), Expect = 0.73 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +1 Query: 157 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 333 K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126 Query: 334 DVVLLN 351 D+VL N Sbjct: 127 DIVLYN 132 >SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 534 Score = 31.9 bits (69), Expect = 0.73 Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 9/160 (5%) Frame = +1 Query: 82 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 249 E A + + +D L ++ D+ P +VV + +++ + I + +++ + Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101 Query: 250 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 414 W D RL+++ E + +W PD + N ++T +Y L + NG+ Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158 Query: 415 SWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEM 534 R+ ++ M L +P D QTC S +D + Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198 >SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) Length = 400 Score = 31.9 bits (69), Expect = 0.73 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 Query: 394 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGS 510 V+N G V W + S+++ WP D+Q C+ GS Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140 >SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) Length = 269 Score = 31.5 bits (68), Expect = 0.96 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +1 Query: 385 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDF 540 +A V +NG W +I + + + +P D Q C K GS + +++F Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72 >SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) Length = 88 Score = 31.1 bits (67), Expect = 1.3 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = +1 Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 279 +++ LL YDR P + V +TL L T+ + D+ W + L+WN Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62 Query: 280 GEWG-CSTWLVSSERLWRPDVVL 345 E+G T VS +W PD+VL Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85 >SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) Length = 301 Score = 30.7 bits (66), Expect = 1.7 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 391 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 501 R+ NG++ + RL +++ M L N+P D Q C K Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100 >SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) Length = 156 Score = 30.3 bits (65), Expect = 2.2 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = +1 Query: 250 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 351 W ++ L+W+ E+G ST V+ +++W PD+ L N Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36 >SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 127 Score = 29.5 bits (63), Expect = 3.9 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +1 Query: 322 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 489 LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76 Query: 490 CTFKXGS 510 C GS Sbjct: 77 CNLVFGS 83 >SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 194 Score = 29.5 bits (63), Expect = 3.9 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = +1 Query: 349 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSD 528 N A T + + ++ N+G W I + ++ + +P D Q C K GS + Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64 Query: 529 EMDFV 543 E++ V Sbjct: 65 EVNIV 69 >SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) Length = 296 Score = 29.5 bits (63), Expect = 3.9 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Frame = +1 Query: 316 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 486 + +W P NA D + NG V + RL I+ + L +P+D+Q Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91 Query: 487 TC 492 C Sbjct: 92 VC 93 >SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 346 Score = 29.5 bits (63), Expect = 3.9 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = +1 Query: 322 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 489 LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203 Query: 490 CTFKXGS 510 C GS Sbjct: 204 CNLVFGS 210 >SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) Length = 360 Score = 29.1 bits (62), Expect = 5.1 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 298 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 408 TWL+ +WRPD+VL +A D L R ++++NG Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306 >SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 137 Score = 29.1 bits (62), Expect = 5.1 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +1 Query: 130 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 294 YD+ P D+ V L + + N I E V + ++ NW D RL+ N + Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72 Query: 295 STWLVSSERLWRPDVVLLNAAA 360 + E++WRPD NA A Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94 >SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) Length = 517 Score = 29.1 bits (62), Expect = 5.1 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +1 Query: 322 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 492 +W PD V ++A+ + + + V+ G V W R + M L +P D QTC Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97 >SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) Length = 137 Score = 29.1 bits (62), Expect = 5.1 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = +1 Query: 130 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 294 YD+ P D+ V L + + N I E V + ++ NW D RL+ N + Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72 Query: 295 STWLVSSERLWRPDVVLLNAAA 360 + E++WRPD NA A Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94 >SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) Length = 428 Score = 29.1 bits (62), Expect = 5.1 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Frame = +1 Query: 238 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 351 + W D L WN G V +W PD+ L+N Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66 >SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1516 Score = 29.1 bits (62), Expect = 5.1 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = -2 Query: 207 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 103 L+++S +G VD FGV + +R +++D+E Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628 >SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 142 Score = 28.3 bits (60), Expect = 8.9 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +1 Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHXSDEMDFV 543 NG W+ + +++ + + +P D Q C+ K GS + + +D V Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLV 68 >SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1758 Score = 28.3 bits (60), Expect = 8.9 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +1 Query: 229 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 351 + DLQ W + L+W+ ++G + V+ E +W PD+V+ N Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506 >SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) Length = 229 Score = 28.3 bits (60), Expect = 8.9 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Frame = +1 Query: 85 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 252 NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74 Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 351 D R N E + ++ W PD N Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,713,366 Number of Sequences: 59808 Number of extensions: 495239 Number of successful extensions: 1285 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 1158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1255 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2586032617 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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