Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J15
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    62   2e-11
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    61   5e-11
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    60   9e-11
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    60   1e-10
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    60   1e-10
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    59   2e-10
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    59   2e-10
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    58   5e-10
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    57   6e-10
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    57   6e-10
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    55   2e-09
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    55   2e-09
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   4.0  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 62.5 bits (145), Expect = 2e-11
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
 Frame = +2

Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 331
           ++ + L L  L   N++    T  +   ++ +W D +L W   E+G    L V S+ +WR
Sbjct: 54  RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111

Query: 332 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 499
           PD+VL N A    G Y +    +A V NNG V W       +  S+ ++ +P D+QTC  
Sbjct: 112 PDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFPYDVQTCVL 168

Query: 500 KFGS 511
           K GS
Sbjct: 169 KLGS 172


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 60.9 bits (141), Expect = 5e-11
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
 Frame = +2

Query: 125 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 304
           +R + +     ++   LTL  +  ++ E    +   A L + W D  L WN  E+G    
Sbjct: 39  ERPVANESDPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNDSEYGGVRD 97

Query: 305 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 478
           L ++  +LW+PDV++ N+A     G Y     V NNGS  ++      +   + +  +P 
Sbjct: 98  LRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPF 157

Query: 479 DMQTCTFKFGSRMHXSDXMDFVID 550
           D Q C  KFGS  +  + +D +++
Sbjct: 158 DDQHCEMKFGSWTYDGNQLDLILN 181


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 60.1 bits (139), Expect = 9e-11
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
 Frame = +2

Query: 167 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVV 343
           V   + + H  I E +ST+ +   ++ +W D +L+WN   +G  +        +WRPDVV
Sbjct: 65  VETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASYGNLNVVRWDPTIVWRPDVV 124

Query: 344 LL-NAAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
           L  NA  +    Y      V + G V W+   +      + +  WP D Q C  K GS
Sbjct: 125 LYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCIVKIGS 182


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 59.7 bits (138), Expect = 1e-10
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
 Frame = +2

Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 373
           N+ E    ++    L++ W D +L W+  ++G      +  +++W+PD+VL N A    G
Sbjct: 65  NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121

Query: 374 DYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMDF 541
           +Y +R +    +  NG V W+      +  ++ +  +P D QTC  KFGS     D +  
Sbjct: 122 NYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181

Query: 542 VI 547
            +
Sbjct: 182 AL 183


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 59.7 bits (138), Expect = 1e-10
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
 Frame = +2

Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 331
           ++ + L L  L   N++    T  +   ++ +W D +L W   E+G    L V S+ +WR
Sbjct: 54  RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111

Query: 332 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 508
           PD+VL N A        A +A + + G V W       +   + ++ +P D QTC  KFG
Sbjct: 112 PDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 171

Query: 509 S 511
           S
Sbjct: 172 S 172


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 59.3 bits (137), Expect = 2e-10
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +2

Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 412
           L + W D  L WN  E+G    L ++  +LW+PDV++ N+A     G Y     V NNGS
Sbjct: 76  LSLEWNDYNLRWNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135

Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMDFVID 550
             ++      +   + +  +P D Q C  KFGS  +  + +D +++
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLILN 181


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 58.8 bits (136), Expect = 2e-10
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +2

Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 412
           ++  W D +L W   E+G    L V S+ +WRPD+VL N A        A +A ++  G 
Sbjct: 76  VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 135

Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
           V W       +   + ++ +P D QTC  KFGS
Sbjct: 136 VEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 168


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 57.6 bits (133), Expect = 5e-10
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
 Frame = +2

Query: 161 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 328
           ++V L L L      N+++   T  I   L+  W D +  W+  E+G  T L V SE +W
Sbjct: 61  VLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHKFKWDPAEYGGVTELYVPSEHIW 118

Query: 329 RPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 496
            PD+VL N A    G+Y +    +A +   G V W       +   + +  +P D QTC 
Sbjct: 119 LPDIVLYNNAD---GEYVVTTLTKAILHYTGKVIWTPPAIFKSSCEIDVRYFPFDQQTCF 175

Query: 497 FKFGSRMHXSDXMD 538
            KFGS  +  + +D
Sbjct: 176 MKFGSWTYDGNQID 189


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 57.2 bits (132), Expect = 6e-10
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +2

Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 412
           L++ W D  + WN+ E+G    L +   RLW+PDV++ N+A     G Y     V NNGS
Sbjct: 59  LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 118

Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMD 538
             ++      +   + +  +P D Q C  KFGS  +    +D
Sbjct: 119 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 160


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 57.2 bits (132), Expect = 6e-10
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +2

Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 412
           L++ W D  L WN  E+G    L +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 91  LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 150

Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMD 538
             ++      +   + +  +P D Q C  KFGS  +    +D
Sbjct: 151 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 192


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +2

Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 403
           ++  W D +L W+  E+G    L V SE++W PD+VL N      G+Y +    +A +  
Sbjct: 82  VKQKWFDYKLRWDPEEYGGVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKY 138

Query: 404 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
            G V W       +   M ++ +P D QTC  KFGS
Sbjct: 139 TGEVFWEPPAIYKSSCEMNVEYFPYDEQTCLMKFGS 174


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
 Frame = +2

Query: 128 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 301
           R +G+      + + L L  L   N++    T  +   ++  W D +L WN  ++G   T
Sbjct: 40  RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 97

Query: 302 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 469
             V SE +W PD+VL N A    G+Y +    +A + + G V W       +   + ++ 
Sbjct: 98  LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 154

Query: 470 WPNDMQTCTFKFGS 511
           +P D QTC  KFGS
Sbjct: 155 FPFDEQTCFMKFGS 168


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +2

Query: 212  ESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV--LLNAAATTAGDYAL 385
            ++  + + D+    ++K L W A +   S     + ++W  D+   L N  A T+  Y L
Sbjct: 933  QTASKYMNDIDAAMVEKALDWLASKQHSSGRFDETGKVWHKDMQGGLRNGVALTS--YVL 990

Query: 386  RARVSNN 406
             A + N+
Sbjct: 991  TALLEND 997


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,456
Number of Sequences: 2352
Number of extensions: 13875
Number of successful extensions: 54
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)