Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J14
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   7.1  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.4  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 137 STICYRNNSL*HLSNFNQYVQPSLNHTT*Q 48
           ++ C R  S+  L+N+ Q ++P   HT  Q
Sbjct: 7   NSACMRGGSVRTLNNYQQVMEPRSPHTAWQ 36


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 642 PGL-LY*CHITLAVVIGLK-TIRVGT 571
           PG  L+ CH    +VIG+   ++VGT
Sbjct: 664 PGFWLFHCHFLFHIVIGMNLVLQVGT 689


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 613 SSSSHWLKNDSCRNYPLVMTDPL 545
           SS+S+  K  SCR +   + DPL
Sbjct: 57  SSNSYTPKIKSCRPFKAYIKDPL 79


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 402 RFLRDSDLPSR*QRRYYTTY 343
           +F  D+ LP R Q+R+Y +Y
Sbjct: 107 KFDPDNFLPERCQQRHYYSY 126


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 754 LAFLFACLLEPEVIERVVYW 695
           LA  +ACLL    I  V+YW
Sbjct: 43  LAKCYACLLMVVKILWVIYW 62


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 363 RRYYTTYVCCIHVLV 319
           R+YY   VCC+++ +
Sbjct: 53  RKYYWLNVCCLNLSI 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,939
Number of Sequences: 336
Number of extensions: 4078
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)