Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J14
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   3.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   6.7  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.9  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 583 SCRNYPLVMTDPLLRSKFHLRFALALISCNSLLRVVFPLVNA 458
           SC NY      P L +  HL   + L++CN   R  +P +NA
Sbjct: 144 SCHNY----LQPDLFAA-HLHQQVGLVACNGNFRPRYPFLNA 180


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 660 QFTVSCPGL-LY*CHITLAVVIGLKTI-RVGT 571
           +F    PG  L+ CH    +VIG+  I +VGT
Sbjct: 700 RFRADNPGFWLFHCHFLFHIVIGMNLILQVGT 731


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 321 QERECSIRKSCNNVSVTSMEDLSH 392
           +ER+ ++ K C  + V  +E++SH
Sbjct: 115 KERDDAVAKLCRTMDVRCVENVSH 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,964
Number of Sequences: 2352
Number of extensions: 16786
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)