Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J14
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein p...    32   3.0  
AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens ...    32   3.0  
BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.      31   7.0  
AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens ...    31   7.0  
AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.              31   7.0  
AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.              31   7.0  
AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.              31   7.0  

>BC077727-1|AAH77727.1|  541|Homo sapiens DKFZP564J0863 protein
           protein.
          Length = 541

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIFHRGNR---DVITRLTYAAFTFLWR 315
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>AK023383-1|BAB14552.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
           Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
           ).
          Length = 541

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIFHRGNR---DVITRLTYAAFTFLWR 315
           C ++     MTS+V++ N+SQN++ DD    Q+F    R   D I +  +    FL R
Sbjct: 156 CATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVR 213


>BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 378
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 16  CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 49


>AK026946-1|BAB15598.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23293 fis, clone HEP10514. ).
          Length = 579

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 378
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 378
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 378
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


>AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 479 CISVSKRHVMTSTVKLGNMSQNVRCDDFFVTQIF 378
           C +V     MTS+V++ N+SQN++ DD    Q+F
Sbjct: 187 CATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLF 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,622,321
Number of Sequences: 237096
Number of extensions: 2513830
Number of successful extensions: 12083
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12083
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)