Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J14
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    42   0.001
AY058636-1|AAL13865.1|  495|Drosophila melanogaster LD33386p pro...    30   4.6  
AE013599-535|AAF59172.1|  495|Drosophila melanogaster CG15835-PA...    30   4.6  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +3

Query: 300 NTSSGTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 473
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 474 NTTRNKLLQEIKA 512
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>AY058636-1|AAL13865.1|  495|Drosophila melanogaster LD33386p
           protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 258 TCSKYSKKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSY 413
           T ++Y K+++     +   +PQ+R CS+  +    +  S ED+  +  V+SY
Sbjct: 362 TLNEYEKQENLRAAKSEEESPQKRGCSLAGNGCERNAESAEDVDDKASVSSY 413


>AE013599-535|AAF59172.1|  495|Drosophila melanogaster CG15835-PA
           protein.
          Length = 495

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 258 TCSKYSKKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSY 413
           T ++Y K+++     +   +PQ+R CS+  +    +  S ED+  +  V+SY
Sbjct: 362 TLNEYEKQENLRAAKSEEESPQKRGCSLAGNGCERNAESAEDVDDKASVSSY 413


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,303,531
Number of Sequences: 53049
Number of extensions: 730953
Number of successful extensions: 1485
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)