Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J13
(840 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 106 3e-23
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 106 3e-23
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 90 3e-18
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 78 1e-14
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 74 2e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 69 1e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 69 1e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 65 1e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 65 1e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 65 1e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 5e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 5e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 5e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 5e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 5e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 2e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 56 6e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 56 6e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 56 6e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 56 6e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 9e-05
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 38 0.017
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.023
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 33 0.49
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.49
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 3.4
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 3.4
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 6.0
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 6.0
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 6.0
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 6.0
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 6.0
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 6.0
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 6.0
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 7.9
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 7.9
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 29 7.9
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 7.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 106 bits (255), Expect = 3e-23
Identities = 55/164 (33%), Positives = 92/164 (56%)
Frame = +1
Query: 154 LFSLYINDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 333
LF+++ +DIP+ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 334 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 513
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 736 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 782
Query: 514 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P
Sbjct: 783 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 826
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 106 bits (255), Expect = 3e-23
Identities = 55/164 (33%), Positives = 92/164 (56%)
Frame = +1
Query: 154 LFSLYINDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 333
LF+++ +DIP+ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 334 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 513
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 684 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 730
Query: 514 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P
Sbjct: 731 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 774
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 90.2 bits (214), Expect = 3e-18
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPP-----ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKW 315
LL+ LY +D+P+P ++ LA FADD + Y R +Q +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 316 RIDINPTKSAAVLF--KRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 489
I IN +KS V F KR PP P+ + P+P + KYLG
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP-------------------PVYIEEVPVPQPNAAKYLG 749
Query: 490 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
V LDR +TF H+ +R R + + Y +L SRSKLSL NK+T+YK + P
Sbjct: 750 VLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAP 801
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 708 QVIQSRFCRIAVGAPWFLRNVDLXNDLE 791
Q IQ++ R+ G WF+RN L DL+
Sbjct: 822 QAIQNKVARLITGCEWFVRNTTLHRDLK 849
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 78.2 bits (184), Expect = 1e-14
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
LL+S++ D+P P H LA +ADD A+ YS + R LQ + TL W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
++W + +NP K+ P + + + +PI L G + S+ KYL
Sbjct: 710 KRWILKVNPQKTIN---------------PCFTLKTLSPVTAPIELEGVILDQPSQAKYL 754
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
G+TLD+ +TF PH+K R + +L +L +S ++LR K +Y C+ P
Sbjct: 755 GITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAP 807
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 66 RFDIE*RELVLVPXQLTAGVPQGSALSPXI 155
RF + R +P + AGVPQGS L P +
Sbjct: 622 RFMVRVRNSYSIPRVMRAGVPQGSVLGPLL 651
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 74.1 bits (174), Expect = 2e-13
Identities = 51/164 (31%), Positives = 76/164 (46%)
Frame = +1
Query: 154 LFSLYINDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 333
L+ +Y DIP ++ FADDTAI R +L + + + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 334 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 513
K V F R P P+ L P+P +V YLGV LDR +T
Sbjct: 708 QKCKHVTFTLNR-----QDCP------------PLLLNSIPLPKADEVTYLGVHLDRRLT 750
Query: 514 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
+R HI+ + + L+ ++ S S LSL +KV LY + ++P
Sbjct: 751 WRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKP 794
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 708 QVIQSRFCRIAVGAPWFLRNVDLXNDL 788
Q QS+ R GAPW++R+ ++ DL
Sbjct: 815 QRAQSKILRTITGAPWYVRSENIQRDL 841
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 68.5 bits (160), Expect = 1e-11
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +1
Query: 154 LFSLYINDIP-RPPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 309
L+S++ +D+P P T +A +ADDTA+ + + LQ + QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 310 KWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 489
W + IN K A V F N T S P ++L G+ I KYLG
Sbjct: 712 NWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNGRLIRHHQAYKYLG 754
Query: 490 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P
Sbjct: 755 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 806
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 699 NPFQVIQSRFCRIAVGAPWFLRNVDLXNDLE 791
N +++Q++ R GAPW++R D+ DL+
Sbjct: 824 NKIRILQAKTLRRISGAPWYMRTRDIERDLK 854
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 68.5 bits (160), Expect = 1e-11
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +1
Query: 154 LFSLYINDIP-RPPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 309
L+S++ +D+P P T +A +ADDTA+ + + LQ + QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 310 KWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 489
W + IN K A V F N T S P ++L G+ I KYLG
Sbjct: 514 NWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNGRLIRHHQAYKYLG 556
Query: 490 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P
Sbjct: 557 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 608
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 699 NPFQVIQSRFCRIAVGAPWFLRNVDLXNDLE 791
N +++Q++ R GAPW++R D+ DL+
Sbjct: 626 NKIRILQAKTLRRISGAPWYMRTRDIERDLK 656
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.3 bits (152), Expect = 1e-10
Identities = 49/165 (29%), Positives = 70/165 (42%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 330
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 331 PTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 510
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 511 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
T+R HI+ L+ ++ +RS LSL K LY + ++P
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 708 QVIQSRFCRIAVGAPWFLRNVDLXNDLEARL 800
Q QSR RI GAPW+LRN ++ DL+ +L
Sbjct: 813 QRAQSRILRIITGAPWYLRNENIHRDLKIKL 843
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 65.3 bits (152), Expect = 1e-10
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIP-----RPPETH---LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
LL+S++ +D+P RP T L+ +ADDT + S + R + + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V+F + + +P S + + GQ I SK YL
Sbjct: 767 DKWGISVNAAKTGHVIF------TLKNDLPTNSMN--------VKIKGQTIKKESKQSYL 812
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GVTLD +T H+ + + + +L +L RSKL + K+ + K+ + P
Sbjct: 813 GVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSP 865
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 65.3 bits (152), Expect = 1e-10
Identities = 49/165 (29%), Positives = 70/165 (42%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 330
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 331 PTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 510
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 511 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
T+R HI+ L+ ++ +RS LSL K LY + ++P
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 708 QVIQSRFCRIAVGAPWFLRNVDLXNDLEARL 800
Q QSR RI GAPW+LRN ++ DL+ +L
Sbjct: 813 QRAQSRILRIITGAPWYLRNENIHRDLKIKL 843
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 59.7 bits (138), Expect = 5e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
+L+S++ +D+P P H L+ +ADDT + S + R + + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 639 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 684
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 685 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 737
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 5e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
+L+S++ +D+P P H L+ +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 5e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
+L+S++ +D+P P H L+ +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 59.7 bits (138), Expect = 5e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
+L+S++ +D+P P H L+ +ADDT + S + R + + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 717 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 762
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 763 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 815
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 5e-09
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
+L+S++ +D+P P H L+ +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 57.6 bits (133), Expect = 2e-08
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Frame = +1
Query: 151 LLFSLYINDIP-----RPPETH---LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 306
LL+S++ +D+P RP T L+ +ADDT + S + R + + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 307 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 486
KW I +N K+ V+F + + +P +++ + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIF------TLKNDLP--------TSLRTMKIKGQVIKIESKQSYL 800
Query: 487 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 645
GV LD +T H+ + + ++ +L RSKL + K+ + K+ + P
Sbjct: 801 GVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSP 853
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.0 bits (129), Expect = 6e-08
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 151 LLFSLYINDIPRP-----------PETH-----LALFADDTAIYYSCRKMSLLHRRLQIA 282
+L+S+Y +D+P P P+ H LA +ADDT I + L Q
Sbjct: 251 VLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNY 310
Query: 283 VATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 462
+ +W +KW I IN K+ +LF ++ T+ +P + GQ
Sbjct: 311 LNVFCRWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAA 356
Query: 463 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 642
++K +YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K +
Sbjct: 357 KLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVS 416
Query: 643 P 645
P
Sbjct: 417 P 417
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 6e-08
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 151 LLFSLYINDIPRP-----------PETH-----LALFADDTAIYYSCRKMSLLHRRLQIA 282
+L+S+Y +D+P P P+ H LA +ADDT I + L Q
Sbjct: 698 VLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNY 757
Query: 283 VATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 462
+ +W +KW I IN K+ +LF ++ T+ +P + GQ
Sbjct: 758 LNVFCRWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAA 803
Query: 463 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 642
++K +YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K +
Sbjct: 804 KLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVS 863
Query: 643 P 645
P
Sbjct: 864 P 864
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 6e-08
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 151 LLFSLYINDIPRP-----------PETH-----LALFADDTAIYYSCRKMSLLHRRLQIA 282
+L+S+Y +D+P P P+ H LA +ADDT I + L Q
Sbjct: 698 VLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNY 757
Query: 283 VATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 462
+ +W +KW I IN K+ +LF ++ T+ +P + GQ
Sbjct: 758 LNVFCRWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAA 803
Query: 463 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 642
++K +YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K +
Sbjct: 804 KLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVS 863
Query: 643 P 645
P
Sbjct: 864 P 864
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.0 bits (129), Expect = 6e-08
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Frame = +1
Query: 151 LLFSLYINDIPRP-----------PETH-----LALFADDTAIYYSCRKMSLLHRRLQIA 282
+L+S+Y +D+P P P+ H LA +ADDT I + L Q
Sbjct: 698 VLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNY 757
Query: 283 VATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIP 462
+ +W +KW I IN K+ +LF ++ T+ +P + GQ
Sbjct: 758 LNVFCRWSKKWDIAINAKKTGHILFSL--------------KKEQTNIYTPPLINGQRAA 803
Query: 463 WVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIR 642
++K +YLG+ LDR +TF H+ ++ + +L ++ S L K+ L+K +
Sbjct: 804 KLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVS 863
Query: 643 P 645
P
Sbjct: 864 P 864
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 448 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 627
G+ +P+V +YLG+T+ GM F HI ++R R ++G L +L + S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 628 KTCIRP 645
+ P
Sbjct: 785 DGLMAP 790
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.017
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 448 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 627
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 628 KTCIRP 645
K+ + P
Sbjct: 63 KSVLSP 68
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.5 bits (83), Expect = 0.023
Identities = 34/134 (25%), Positives = 53/134 (39%)
Frame = +1
Query: 169 INDIPRPPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAA 348
I I +P L FADD AI + + L +A+ +W K + I K+
Sbjct: 631 ILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEV 690
Query: 349 VLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHI 528
VL S R + + + + G I +KYLGV +DR ++F+ H
Sbjct: 691 VLL---------------SSRKSVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHA 734
Query: 529 KTVRDRAAFILGRL 570
+ +AA L
Sbjct: 735 RYASKKAAMTAAAL 748
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 274 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 453
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 454 PIP 462
+P
Sbjct: 818 NVP 820
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 274 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 453
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 454 PIP 462
+P
Sbjct: 818 NVP 820
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 30.3 bits (65), Expect = 3.4
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 334 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 483
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 484 LGVTLDRG 507
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 30.3 bits (65), Expect = 3.4
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 334 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 483
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 484 LGVTLDRG 507
G DRG
Sbjct: 1095 FGFG-DRG 1101
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 258 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 380
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 261 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 380
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 415 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 537
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 415 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 537
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 415 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 537
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 415 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 537
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 261 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 380
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 261 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 362
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 7.9
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 330 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 509
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 510 DIPSPYKNGTR 542
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 151 LLFSLYINDIPRPPETHLALFADDTAI 231
+L++LY DIP + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 7.9
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 330 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 509
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 510 DIPSPYKNGTR 542
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,097,598
Number of Sequences: 53049
Number of extensions: 896320
Number of successful extensions: 2862
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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