Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J09
(855 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1017 + 21747044-21748051 35 0.095
08_01_1010 - 10215625-10216335,10216372-10216473 33 0.29
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 33 0.38
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 32 0.67
10_08_0814 - 20779400-20779487,20779780-20780030,20780528-207808... 31 0.89
07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239 31 0.89
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 31 0.89
04_03_0856 + 20336390-20336906,20337276-20337397 31 1.2
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 31 1.2
10_08_0192 + 15625851-15626765 31 1.5
03_01_0238 + 1854070-1854344,1854621-1854712,1854852-1855045,185... 31 1.5
06_03_0004 + 15296139-15296433,15297045-15297406 30 2.0
05_01_0409 + 3230761-3230856,3231463-3231560,3232747-3233386 30 2.0
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 2.0
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 30 2.7
07_01_0663 + 4975950-4977688,4978183-4978528 29 3.6
06_03_0939 + 26131405-26131596,26132753-26133166 29 3.6
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 3.6
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 29 3.6
01_06_0048 + 25951544-25952074 29 3.6
06_01_0931 + 7192519-7194075 29 4.7
03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806 29 4.7
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903... 29 6.2
10_08_0445 + 17989438-17990895 29 6.2
08_02_0109 - 12642682-12643494 29 6.2
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 29 6.2
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 8.3
08_01_1026 - 10366534-10368021,10368505-10368525 28 8.3
04_04_1076 - 30639835-30640898,30641613-30641915,30642008-306420... 28 8.3
>04_03_1017 + 21747044-21748051
Length = 335
Score = 34.7 bits (76), Expect = 0.095
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Frame = +2
Query: 149 YTPVSXRPIWRSSPMTPPSTTRVG-RRRCFIDDFRPQLPPWDSGSGSGASTLTPRKA--- 316
YTP S P R++ +P T RRR D+ P PP + S + + PR+A
Sbjct: 162 YTPAS--PSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASP 219
Query: 317 --------QRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*AS 472
+R +S +P + S +TPP A + S PR ++ +
Sbjct: 220 DYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYT 279
Query: 473 PSTVG*HSAPTSRRYATVPP 532
PST P++ TVPP
Sbjct: 280 PSTPPSSPLPSAAESFTVPP 299
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 33.1 bits (72), Expect = 0.29
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 5/134 (3%)
Frame = +2
Query: 149 YTPVSXR-PIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRC 325
YTP + P +SP PST RR D+ P PP + S + TP +R
Sbjct: 87 YTPSTPTTPRRAASPDYTPSTPTPPRRAAS-PDYTPSTPPPRAASPDYTPS-TPTPPRRA 144
Query: 326 SSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAP- 502
+S TP+ + S TP PP + +P P R+ ASP P
Sbjct: 145 ASPNYTPSTPQRHAASPDYTPSTPTPPRRAASLDYTPSTPPPRA---ASPDYTPLSPPPR 201
Query: 503 -TSRRY--ATVPPS 535
S Y +T PPS
Sbjct: 202 AASPEYSPSTPPPS 215
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 32.7 bits (71), Expect = 0.38
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Frame = +2
Query: 62 TRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVSXRPIWRSSPMTPPSTTRVGRRRCFID 241
T+S+P ++ GS+ T + +P+ P RS T PS+ F
Sbjct: 127 TKSKPIRIS-----GSSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSAASRSSPPFA- 180
Query: 242 DFRPQLPPWDSGSGSGASTLTP--RKAQRCSSKGVALRTPR*ASLSRLGASITP------ 397
+P P W + A TLTP R S+ R+P AS R+ TP
Sbjct: 181 -LQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPAS-RRMSTGSTPALNRTR 238
Query: 398 -PPPFAQSRCSTSPYRGPRRSNI 463
P P +R S+SP SN+
Sbjct: 239 GPSPVKTNRISSSPKLQGWHSNV 261
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 31.9 bits (69), Expect = 0.67
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2
Query: 281 GSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSN 460
G+ A+++ P + SS G+A R P S SR GA+ PP F C + G N
Sbjct: 46 GARAASMVPEQ----SSSGLAARVPEHRS-SRYGAASPPPSSFTDGSCFFNGSAGGFFGN 100
Query: 461 I*ASPS 478
SPS
Sbjct: 101 AGQSPS 106
>10_08_0814 -
20779400-20779487,20779780-20780030,20780528-20780812,
20781563-20782008,20782095-20782485
Length = 486
Score = 31.5 bits (68), Expect = 0.89
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 254 QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTS 433
+LP + S + + +ST R A+R S L PR AS S AS +PPPP A S
Sbjct: 9 KLPFFASNASTSSSTKRTRSARRLPS----LTRPR-ASSSPSPASPSPPPPSASHPAPPS 63
Query: 434 P 436
P
Sbjct: 64 P 64
>07_01_1043 - 9068201-9068223,9068437-9069355,9070472-9071239
Length = 569
Score = 31.5 bits (68), Expect = 0.89
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 284 SGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRSNI 463
+G++ TPR CS GV P+ L S+ PP A S S +P G R+ +
Sbjct: 18 AGSAARTPR-GWCCSFAGV----PQSPDLRPFPPSLAPPATAASS--SPAPGGGAGRNKL 70
Query: 464 *A-SPSTVG*HSAPTSRRYA 520
SPS HS+PTS R A
Sbjct: 71 PPKSPSISSFHSSPTSSRLA 90
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 31.5 bits (68), Expect = 0.89
Identities = 46/145 (31%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Frame = +2
Query: 35 RSFRYRVEGTRSRP-RHVTAGVPQGSA-----LSPXTIQFVYQRYTPVSXRPIWRSS--P 190
R+FR ++G RS P R AG G+A +P + V +R++ R +S P
Sbjct: 7 RAFRCLLDGLRSLPPRRRRAGAGGGAARRSSKAAPRVV--VIRRFSGKLDRRRASASGGP 64
Query: 191 MTPPS-------TTRVGRRRCFIDDFRPQLP-PWD----SGSGSGASTLTPRKAQRCSSK 334
TPP+ T RV + P +P P D G G G ST +A SS
Sbjct: 65 PTPPAAAAAAPVTIRVATFNAAMFSMAPAVPSPPDHDDYDGDGEGCSTW---RAPASSSG 121
Query: 335 GVAL-RTPR*ASLSRLGASITPPPP 406
G L R P+ L +S PPPP
Sbjct: 122 GSRLARRPKKGILKAQSSSSAPPPP 146
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 RSSPMTPPST-TRVGRRRCFIDDFRPQLPPWDSGSGSG 289
RSSP S TRVGRRR F F P W +G +G
Sbjct: 10 RSSPRGDASAPTRVGRRRAFPLPFASPPPEWPAGKLAG 47
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 185 SPMTPPSTTRVGRRRCFIDDFRP-QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 355
+P+ PPS CF+ P + W + + + PR+ S+ + L TP
Sbjct: 8 TPLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNLPLHTP 65
>10_08_0192 + 15625851-15626765
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 392 TPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 538
TPPPP A S S P++ S+ P+ APTS AT PP F
Sbjct: 6 TPPPPSAPS--SAPPFKSNASSS---RPNRAPPEGAPTSPAAATRPPPF 49
>03_01_0238 +
1854070-1854344,1854621-1854712,1854852-1855045,
1855529-1855568,1855734-1855815,1856972-1857049,
1857144-1857269,1857544-1857665,1858018-1858057,
1858250-1858324,1858414-1858585
Length = 431
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 AIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL-SIPLP 375
AI CR + RRL AA + +WRID N K A R R T + S+P P
Sbjct: 32 AIRCCCRAQQEPRRRLSKAAAAAPERTEEWRIDGN--KPAAAARGRRRASLTAMPSLPFP 89
Query: 376 TRR 384
+ R
Sbjct: 90 SPR 92
>06_03_0004 + 15296139-15296433,15297045-15297406
Length = 218
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 14 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVSXRPIWRSSP 190
I D +S R FR GT S R++T QGS+ S +Q + P P W +P
Sbjct: 89 IEDSISFRFFR----GTYSETRNMTRN-EQGSSSSSTPVQMYEAGWAPTGDAPGWNQAP 142
>05_01_0409 + 3230761-3230856,3231463-3231560,3232747-3233386
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 253 RSEVVDEATPSSYTSSRWRCHRRRAPDGSXGDRGIS 146
R E++ + +P S S +RC+ + P+GS D +S
Sbjct: 65 RDEIISQYSPMSEDSDDYRCYDTQLPNGSQTDAMVS 100
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +2
Query: 278 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRRS 457
+ +G+ LTP+ SS A RTP A+ + ++ P P A R STS PR S
Sbjct: 14 AAAGSRPLTPKAFSASSS---ARRTPAAAAAGKENSASKPSKPTAAVRWSTSSI--PRAS 68
Query: 458 NI*ASPSTVG*HSAPTSRRYATVPP 532
I PS+V ++ R ++V P
Sbjct: 69 RI---PSSVESSKLVSTLRASSVMP 90
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 377 LGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 532
L AS PPPP R S SP + P ++ P T + PT+ A PP
Sbjct: 73 LAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPP 124
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 263 PWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL----GASITPPPP 406
PW + + + A+ TP + + + + TP S+S G TPPPP
Sbjct: 349 PWSAAAAAAATQFTPSRRPKKDHPEIVMGTPTPLSMSAYTLSEGDYRTPPPP 400
>06_03_0939 + 26131405-26131596,26132753-26133166
Length = 201
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 312 FRGVNVDAPLPEPLSHGGSCGLKS--SMKQRLLPTRVVDGGVIGEERQ 175
F G++ APLP P + G CG + S+ + P+ ++ G + ++R+
Sbjct: 134 FSGLHYKAPLPRPSAGGHRCGAVATPSVTDEVAPSALLLGHIAPQQRK 181
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 377 LGASITPPPPFAQSRCSTSPYRGP 448
LGA++ PPPP A ++ + +P GP
Sbjct: 82 LGAALPPPPPAAAAQPAVAPLPGP 105
>02_05_0190 -
26592452-26592693,26592911-26593004,26593425-26593656,
26594660-26595066
Length = 324
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +2
Query: 275 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPRR 454
G G GAST SS G PR S RL + +PPPP A + + R RR
Sbjct: 27 GGGGGASTSATSPVAASSSSG---GRPRTRSGGRLLRATSPPPPSAIAAAACWESRTMRR 83
>01_06_0048 + 25951544-25952074
Length = 176
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 241 VDEATPSSYTS---SRWRCHRRRAPDGSXGDRGISLIYKLNSXRGEG 110
V+EA P +T S WR + + D S RG S + +L G G
Sbjct: 5 VEEAFPIGFTKGIRSYWRSRKYHSVDSSAAGRGTSNLVRLGGGSGSG 51
>06_01_0931 + 7192519-7194075
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 VPQGSALSPXTIQFVYQRYTPVSXRPIWRS-SPMTPPSTTRVGRRRCFIDDFRPQ 256
+P + LSP T + V +R P P RS +P PP + V R + DD Q
Sbjct: 110 LPYPAPLSPDTARDVVRRLMPSPPPPPPRSQAPPPPPPASSVRTRSYYSDDLVQQ 164
>03_05_1040 + 29883071-29883212,29883372-29883439,29883504-29883806
Length = 170
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 313 STAVLFKRGRPPNTTLSIPLPTRR 384
S FKRG PP + +PLP R+
Sbjct: 118 SNGYAFKRGNPPEGIVEVPLPPRQ 141
>12_02_0760 -
22888636-22889407,22889503-22889769,22890001-22890302,
22890402-22890512,22890990-22891568,22892026-22892087,
22892434-22892754,22893434-22893776
Length = 918
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/80 (31%), Positives = 31/80 (38%)
Frame = +2
Query: 155 PVSXRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSK 334
P + RP+ P R GRRRC D + PP + GA PR K
Sbjct: 294 PATRRPVLGGRGRPYPRRCRTGRRRCRTDP-SSESPP----AKDGAGIYVPRDEAFTERK 348
Query: 335 GVALRTPR*ASLSRLGASIT 394
A T + +LS L A T
Sbjct: 349 AGAFATKK--ALSALSAFTT 366
>10_08_0445 + 17989438-17990895
Length = 485
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 248 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCS 427
RP P + PR+ +R ++ VA R R S ++TPPP R
Sbjct: 368 RPVTVPKSETWATTTDEQQPRRRERAAAAAVARREIR---KSATATNMTPPPSPPHVRAP 424
Query: 428 TSPYRGPRRS 457
+P R P R+
Sbjct: 425 PAPARRPWRT 434
>08_02_0109 - 12642682-12643494
Length = 270
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 232 ATPSSYTSSRWRCHRRRAPDGSXGDRG 152
A P SRWR RRR P G RG
Sbjct: 96 AGPGVDDESRWRRRRRRGPGGGDDSRG 122
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 456 QIFRRHPRQ*DDIPPPHQDGTRPCRLHSRTSLPDDMQAK 572
Q+FR H D P H DG RPCR+ + M+A+
Sbjct: 266 QLFRLHASVCDRAAP-HDDGDRPCRVPLCSHFKGKMRAE 303
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 59 GTRSRPRHVTAGVPQGSALSP 121
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +2
Query: 182 SSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGV 340
S+P PP +D +PP G G G +P K +S GV
Sbjct: 85 SAPPPPPPAEPEPEPEQDEEDAASMIPPASDGGGGGGGGFSPTKLSMLTSAGV 137
>04_04_1076 -
30639835-30640898,30641613-30641915,30642008-30642068,
30643076-30644380
Length = 910
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 202 WRCHRRRAPDGSXGDRG 152
W C RR PDG G RG
Sbjct: 282 WLCFRRAGPDGEEGPRG 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,570,897
Number of Sequences: 37544
Number of extensions: 641555
Number of successful extensions: 2657
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2648
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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