Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J09
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 37 0.016
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 36 0.037
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.26
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.45
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 32 0.45
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.60
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.4
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 2.4
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 30 2.4
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 5.6
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 5.6
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.4
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 28 9.7
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 28 9.7
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 28 9.7
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 14 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 121
+ ++LSNRSFR R+ T S + T GVPQG+ LSP
Sbjct: 50 VNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP 85
Score = 39.1 bits (87), Expect = 0.004
Identities = 44/191 (23%), Positives = 79/191 (41%)
Frame = +1
Query: 139 ISTIYPGLRETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKST 318
IS+I P + FADDT +Y S K LQ+A + W + ++ +N +K
Sbjct: 95 ISSILP--EKVACKQFADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQSK-- 149
Query: 319 AVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFR 498
T+ + + RR++ + PI + LG + ++ F
Sbjct: 150 ------------TVHVTVGKRRIDFK------YHLDGYPIERKAITRDLGFLISEKLDFS 191
Query: 499 PHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVXFAHAARIHLK 678
H + + A F L ++ +K + + LYKT IRP + Y +V + + K
Sbjct: 192 DHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEK 248
Query: 679 SFQIIQSRFCR 711
+ + +Q+ F R
Sbjct: 249 TIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +1
Query: 433 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 612
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 613 CIRPVMTYASVXFAHAARIHLKSFQIIQSRFCR 711
IRP + Y +V + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 433 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 612
PI + + LG+ DS++TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 613 CIRPVMTYASVXFA 654
I P++ Y S ++
Sbjct: 245 YILPLIEYGSAVYS 258
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 313 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 450
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 313 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 450
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 433 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 612
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 613 CIRPVMTYASVXFA 654
+ P+M Y S +A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 121
+++L NR+F ++ S+ + +++GVPQGS P
Sbjct: 854 KEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGP 889
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 358 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 528
++ PLP+ P VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 331 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 450
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 373 PTRRVNNPAPAVRPITMFDQPIPW 444
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +2
Query: 272 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 451
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 452 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 556
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +2
Query: 272 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 451
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 452 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 556
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
glp-1 gene,complete cds. ).
Length = 1295
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +2
Query: 272 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCSTSPYRGPR 451
SG G+ + T + +R S+ +TP A+ SR +TPPP S S SP+ P
Sbjct: 1180 SGHGAKSGRQTVKNIKRAGSR----KTPTSAASSRETNHLTPPPSDG-SFSSPSPHYYPT 1234
Query: 452 RSN----I*ASPSTVG*H--SAPTSRRYATVPPSF*DVSTR 556
++ + SP + H + P + + T PP + D + R
Sbjct: 1235 TTSTPNRMETSPEYMFNHEMAPPVNAMWYTTPPPYQDPNYR 1275
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 133 VCISTIYPGLRETHLALFADDTA-IYYSCRKKALLHRR 243
+ +S Y GL H A+ +D +Y+ CRK A +H+R
Sbjct: 175 IFLSEEYYGLSPLHQAIVNEDLEMVYFLCRKGADVHQR 212
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 732 PRGSDGYPAKTGLNNLKG 679
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 732 PRGSDGYPAKTGLNNLKG 679
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 732 PRGSDGYPAKTGLNNLKG 679
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 389 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 264
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 419 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 276
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 49 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRETHLALFADD 195
S G P+PS+ S SP P+P ++ + + G+ + LF ++
Sbjct: 165 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGMNDYKGTLFQNN 213
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 49 SSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRETHLALFADD 195
S G P+PS+ S SP P+P ++ + + G+ + LF ++
Sbjct: 185 SGSGETSPSPSQPSISPPNENPMPSVQALNVLELLSGMNDYKGTLFQNN 233
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 8 LIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQF 136
L + +YL R R + S+ + GVPQGS +SP F
Sbjct: 504 LWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTF 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,001,130
Number of Sequences: 27780
Number of extensions: 456236
Number of successful extensions: 1791
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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